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The map label for this gene is recJ [H]

Identifier: 121610124

GI number: 121610124

Start: 3548589

End: 3550319

Strand: Direct

Name: recJ [H]

Synonym: Veis_3183

Alternate gene names: 121610124

Gene position: 3548589-3550319 (Clockwise)

Preceding gene: 121610123

Following gene: 121610126

Centisome position: 63.75

GC content: 69.79

Gene sequence:

>1731_bases
ATGAAAATAGTAGCCAGAGAGATCCCCCCCCGTGCCGTCTGGACGCTCGAGCAGGCCGGGGTACACCCCCTGCTGGCCCG
CCTGTACGCCGCGCGCGGCGTGCGCGCCAAAGACGAACTCGACGACGACCTGGCCCGTCTGCTGCCACCGCAGGGCCTGA
AAGGCATCGCCGCCGCGGCCCGACTGCTGGCCGATGCCGTGGCGCGCGACCAGCGCCTGCTGATCGTTGCCGACTACGAC
TGCGATGGCGCCACCGCCTGCGCCGTCGGCGTGCGCGGCCTGCGCCTGCTGGGCGCCAGGCATGTCGACTACCTGGTGCC
CGACCGCATGACCGACGGCTACGGCCTGACCCCGCCCATCGCCCGCCGTGTGAAAGAACGCGGCGCCGATCTGCTGATCA
CCGTGGACAACGGCATCGCCAGCGTCGCCGGCGTGGCCGAAGCCAAGGCGCTGGGCCTGTCGGTGCTCGTCACCGACCAC
CACCTGCCCGGCCCCGAACTGCCGGCAGCCGACGCCATCGTCAACCCCAACCAGCCCGGCTGCGGGTTCGAAAGCAAAGC
GCTGGCCGGCGTCGGCGTGATGTTCTACGTGCTGCTGGCGCTGCGCTCGGAACTGCGCGCGCGCGCGCTGCTGAACGCCG
ACACCCAACCCCGGCTCGACCCGCTGCTGGCACTGGTAGCCCTGGGCACCGTGGCCGATGTGGTCAAGCTCGACGCGAAC
AACCGGCGCCTGGTGGCGCAGGGCCTCAGACGCATCCGCACCGGCACCCTGCCTGCCGGCGTGGCCGCGCTGTTCACCGC
CGCCGGGCGCAAAGCCCAGGCCGCCACCACCTTCGACTTCGGCTTTGCGCTGGGCCCGCGCATCAATGCCGCAGGGCGCC
TGGCCGACATGACGCTGGGCATCGAATGCCTGCTGACCGACGACAGCGGCCGCGCCGCCGAACTGGCCGGCACGCTCGAC
CGCATCAACCGCGAGCGCCGCACCATCGAGGACGGCATGCGCGGGCAGGCCATGCTGCTGGCCGAAAACCTGTGCGCCGG
CGGCGCAGCGCCGCCACCGGCCATCAGCGTGTTCGACCCCGACTTTCACGAAGGCGTGGCAGGCATCGTGGCCTCGCGCA
TCAAGGACAAACTGCACCGCCCCGCCTTCGTGTTCGCCGTCAGCCGCGCGCCGGGCAAGGAGCATGAGCTCAAAGGCTCG
GGCCGATCGATTGCCGGGTTTCACCTGCGCGACGCGCTCGACCTGGTGGCCAAGCGCCACCCGGGCGTATTGCTGAAATT
CGGCGGCCATGCAATGGCCGCAGGCTGCACGCTGGCCGCGCAGACCTTCGCGGTGTTCGAGCAGGCCCTGGCCCAGGTCG
CGCAAGAATGGCTGGACGCTGCCACCCTGACGCGGCGCATCGAAACCGACGGCCCGCTGGCGCGTGAATACTGCCGCGCC
GAAATGGTCGACACATTGCACCGCGAAGTCTGGGGCCAAGGCTTTGCGCCACCGACCTTCAGCGAAGAAGTCGAAGTGCT
GAGCCAGCGGCTGGTGGGCGACAAACACCCGGCGCTCAAACTCAAGCTCAGGCACCAGGGCCACCCGGTGGACGGCATCT
GGTTCGGCCACACCGAACCCCTGCCAGCGCGCGTACTGCTGGCCTTTCGCCTCGATGTGAACGAGTACCAAGGCGAGCGC
AAGGTGCAGTTTCTGATCGAGGGCGCGCAACTGTCGCAGAGCCCGGGATGA

Upstream 100 bases:

>100_bases
AGCGCAATGCCATCCGCTGGCACAGCGCCCGGCGCGGATGGCTGCGGCGGATGCAAAGCCTTTTCCAGCCCCCGCGCATG
ATCGACATACACCACATGCT

Downstream 100 bases:

>100_bases
AAACCCGGCCTGCTATACTCCCCCGCGCTGCGCCAGCCATCACATCAGCACATCGCATGTGACGGATCCCTGACGCAACG
CCGATGTAGCTCAGTTGGTA

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 576; Mature: 576

Protein sequence:

>576_residues
MKIVAREIPPRAVWTLEQAGVHPLLARLYAARGVRAKDELDDDLARLLPPQGLKGIAAAARLLADAVARDQRLLIVADYD
CDGATACAVGVRGLRLLGARHVDYLVPDRMTDGYGLTPPIARRVKERGADLLITVDNGIASVAGVAEAKALGLSVLVTDH
HLPGPELPAADAIVNPNQPGCGFESKALAGVGVMFYVLLALRSELRARALLNADTQPRLDPLLALVALGTVADVVKLDAN
NRRLVAQGLRRIRTGTLPAGVAALFTAAGRKAQAATTFDFGFALGPRINAAGRLADMTLGIECLLTDDSGRAAELAGTLD
RINRERRTIEDGMRGQAMLLAENLCAGGAAPPPAISVFDPDFHEGVAGIVASRIKDKLHRPAFVFAVSRAPGKEHELKGS
GRSIAGFHLRDALDLVAKRHPGVLLKFGGHAMAAGCTLAAQTFAVFEQALAQVAQEWLDAATLTRRIETDGPLAREYCRA
EMVDTLHREVWGQGFAPPTFSEEVEVLSQRLVGDKHPALKLKLRHQGHPVDGIWFGHTEPLPARVLLAFRLDVNEYQGER
KVQFLIEGAQLSQSPG

Sequences:

>Translated_576_residues
MKIVAREIPPRAVWTLEQAGVHPLLARLYAARGVRAKDELDDDLARLLPPQGLKGIAAAARLLADAVARDQRLLIVADYD
CDGATACAVGVRGLRLLGARHVDYLVPDRMTDGYGLTPPIARRVKERGADLLITVDNGIASVAGVAEAKALGLSVLVTDH
HLPGPELPAADAIVNPNQPGCGFESKALAGVGVMFYVLLALRSELRARALLNADTQPRLDPLLALVALGTVADVVKLDAN
NRRLVAQGLRRIRTGTLPAGVAALFTAAGRKAQAATTFDFGFALGPRINAAGRLADMTLGIECLLTDDSGRAAELAGTLD
RINRERRTIEDGMRGQAMLLAENLCAGGAAPPPAISVFDPDFHEGVAGIVASRIKDKLHRPAFVFAVSRAPGKEHELKGS
GRSIAGFHLRDALDLVAKRHPGVLLKFGGHAMAAGCTLAAQTFAVFEQALAQVAQEWLDAATLTRRIETDGPLAREYCRA
EMVDTLHREVWGQGFAPPTFSEEVEVLSQRLVGDKHPALKLKLRHQGHPVDGIWFGHTEPLPARVLLAFRLDVNEYQGER
KVQFLIEGAQLSQSPG
>Mature_576_residues
MKIVAREIPPRAVWTLEQAGVHPLLARLYAARGVRAKDELDDDLARLLPPQGLKGIAAAARLLADAVARDQRLLIVADYD
CDGATACAVGVRGLRLLGARHVDYLVPDRMTDGYGLTPPIARRVKERGADLLITVDNGIASVAGVAEAKALGLSVLVTDH
HLPGPELPAADAIVNPNQPGCGFESKALAGVGVMFYVLLALRSELRARALLNADTQPRLDPLLALVALGTVADVVKLDAN
NRRLVAQGLRRIRTGTLPAGVAALFTAAGRKAQAATTFDFGFALGPRINAAGRLADMTLGIECLLTDDSGRAAELAGTLD
RINRERRTIEDGMRGQAMLLAENLCAGGAAPPPAISVFDPDFHEGVAGIVASRIKDKLHRPAFVFAVSRAPGKEHELKGS
GRSIAGFHLRDALDLVAKRHPGVLLKFGGHAMAAGCTLAAQTFAVFEQALAQVAQEWLDAATLTRRIETDGPLAREYCRA
EMVDTLHREVWGQGFAPPTFSEEVEVLSQRLVGDKHPALKLKLRHQGHPVDGIWFGHTEPLPARVLLAFRLDVNEYQGER
KVQFLIEGAQLSQSPG

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=554, Percent_Identity=46.9314079422383, Blast_Score=484, Evalue=1e-138,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008279
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 61641; Mature: 61641

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVAREIPPRAVWTLEQAGVHPLLARLYAARGVRAKDELDDDLARLLPPQGLKGIAAAA
CCCCCCCCCCHHEEEHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHH
RLLADAVARDQRLLIVADYDCDGATACAVGVRGLRLLGARHVDYLVPDRMTDGYGLTPPI
HHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCHH
ARRVKERGADLLITVDNGIASVAGVAEAKALGLSVLVTDHHLPGPELPAADAIVNPNQPG
HHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEECCCCCC
CGFESKALAGVGVMFYVLLALRSELRARALLNADTQPRLDPLLALVALGTVADVVKLDAN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
NRRLVAQGLRRIRTGTLPAGVAALFTAAGRKAQAATTFDFGFALGPRINAAGRLADMTLG
CCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHEEEEC
IECLLTDDSGRAAELAGTLDRINRERRTIEDGMRGQAMLLAENLCAGGAAPPPAISVFDP
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEECCC
DFHEGVAGIVASRIKDKLHRPAFVFAVSRAPGKEHELKGSGRSIAGFHLRDALDLVAKRH
CHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEECHHHHHHHHHHHHCC
PGVLLKFGGHAMAAGCTLAAQTFAVFEQALAQVAQEWLDAATLTRRIETDGPLAREYCRA
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
EMVDTLHREVWGQGFAPPTFSEEVEVLSQRLVGDKHPALKLKLRHQGHPVDGIWFGHTEP
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEECCCCCC
LPARVLLAFRLDVNEYQGERKVQFLIEGAQLSQSPG
CHHHEEEEEEECHHHHCCCCEEEEEEECHHHCCCCC
>Mature Secondary Structure
MKIVAREIPPRAVWTLEQAGVHPLLARLYAARGVRAKDELDDDLARLLPPQGLKGIAAAA
CCCCCCCCCCHHEEEHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHH
RLLADAVARDQRLLIVADYDCDGATACAVGVRGLRLLGARHVDYLVPDRMTDGYGLTPPI
HHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCHH
ARRVKERGADLLITVDNGIASVAGVAEAKALGLSVLVTDHHLPGPELPAADAIVNPNQPG
HHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEECCCCCC
CGFESKALAGVGVMFYVLLALRSELRARALLNADTQPRLDPLLALVALGTVADVVKLDAN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
NRRLVAQGLRRIRTGTLPAGVAALFTAAGRKAQAATTFDFGFALGPRINAAGRLADMTLG
CCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHEEEEC
IECLLTDDSGRAAELAGTLDRINRERRTIEDGMRGQAMLLAENLCAGGAAPPPAISVFDP
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEECCC
DFHEGVAGIVASRIKDKLHRPAFVFAVSRAPGKEHELKGSGRSIAGFHLRDALDLVAKRH
CHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEECHHHHHHHHHHHHCC
PGVLLKFGGHAMAAGCTLAAQTFAVFEQALAQVAQEWLDAATLTRRIETDGPLAREYCRA
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
EMVDTLHREVWGQGFAPPTFSEEVEVLSQRLVGDKHPALKLKLRHQGHPVDGIWFGHTEP
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEECCCCCC
LPARVLLAFRLDVNEYQGERKVQFLIEGAQLSQSPG
CHHHEEEEEEECHHHHCCCCEEEEEEECHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1987126; 9278503; 2649886 [H]