| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609953
Identifier: 121609953
GI number: 121609953
Start: 3357192
End: 3357605
Strand: Direct
Name: 121609953
Synonym: Veis_3009
Alternate gene names: NA
Gene position: 3357192-3357605 (Clockwise)
Preceding gene: 121609952
Following gene: 121609954
Centisome position: 60.31
GC content: 46.86
Gene sequence:
>414_bases ATGACAGATAAGAATTTGAATATCACCCCTTTGCAAAATTCCATTTCTCGCCTGGAAGAAGCACTGGAGGTTTACCGAAA CGATCCATCGAACACGCTGATTCGTGACGGTTTGATCCAGCGTTTTGAGTTCACTTACGAAGTGAGCCATAAAATGCTCA AGCGCTATCTGGAATGGGCATCCCCTACACCGGAACAATATGACAATGTGGACTTTCAAACGTTGATACGCAATGGCAAT GAGCAAGGTTTGTTGCGCGGGGAGTGGGTAGATTGGAAAATGTATCGCGATATGCGCAGCAAGACGAGCCATGCTTATGA TGAGCAACTCGCACTGACGGTAGTGAGCGGCATCCCTGCTTTTTTTGCTGAAGCACGACATTTGTACGAGCAACTCAAGA TCAGGCTGTCATGA
Upstream 100 bases:
>100_bases CAAACCGGTGCGGCGATTGCAAAGAATTTCAAGGCACTGGATTTTTGATCATGGCCCAATGGCTTGACGGTGCAATGGCA GAGACGATCAGGAGGCACAT
Downstream 100 bases:
>100_bases AAGAATGCCCGTTGATTGATATTCGACCGGATCATTGGCGCATAGTCGAAGCAATCTTGAAAAAGCATGTTCCCCGGCAC ATGGTGTGGGCATTTGGCTC
Product: HI0074 family nucleotidyltransferase substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MTDKNLNITPLQNSISRLEEALEVYRNDPSNTLIRDGLIQRFEFTYEVSHKMLKRYLEWASPTPEQYDNVDFQTLIRNGN EQGLLRGEWVDWKMYRDMRSKTSHAYDEQLALTVVSGIPAFFAEARHLYEQLKIRLS
Sequences:
>Translated_137_residues MTDKNLNITPLQNSISRLEEALEVYRNDPSNTLIRDGLIQRFEFTYEVSHKMLKRYLEWASPTPEQYDNVDFQTLIRNGN EQGLLRGEWVDWKMYRDMRSKTSHAYDEQLALTVVSGIPAFFAEARHLYEQLKIRLS >Mature_136_residues TDKNLNITPLQNSISRLEEALEVYRNDPSNTLIRDGLIQRFEFTYEVSHKMLKRYLEWASPTPEQYDNVDFQTLIRNGNE QGLLRGEWVDWKMYRDMRSKTSHAYDEQLALTVVSGIPAFFAEARHLYEQLKIRLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010235 [H]
Pfam domain/function: PF08780 NTase_sub_bind [H]
EC number: NA
Molecular weight: Translated: 16217; Mature: 16085
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKNLNITPLQNSISRLEEALEVYRNDPSNTLIRDGLIQRFEFTYEVSHKMLKRYLEWA CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SPTPEQYDNVDFQTLIRNGNEQGLLRGEWVDWKMYRDMRSKTSHAYDEQLALTVVSGIPA CCCCHHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFAEARHLYEQLKIRLS HHHHHHHHHHHHHHHCC >Mature Secondary Structure TDKNLNITPLQNSISRLEEALEVYRNDPSNTLIRDGLIQRFEFTYEVSHKMLKRYLEWA CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SPTPEQYDNVDFQTLIRNGNEQGLLRGEWVDWKMYRDMRSKTSHAYDEQLALTVVSGIPA CCCCHHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFAEARHLYEQLKIRLS HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]