The gene/protein map for NC_008786 is currently unavailable.
Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

Click here to switch to the map view.

The map label for this gene is 121609881

Identifier: 121609881

GI number: 121609881

Start: 3285670

End: 3286104

Strand: Direct

Name: 121609881

Synonym: Veis_2934

Alternate gene names: NA

Gene position: 3285670-3286104 (Clockwise)

Preceding gene: 121609880

Following gene: 121609882

Centisome position: 59.02

GC content: 67.82

Gene sequence:

>435_bases
ATGAATGCGAACAAGTACAAACCCAAGCCGGTTCCGGTCCCGACGCCGGTCACCCAGCCGTTCTGGGACGGCACGCGCGC
CGGCGAGCTGCGTTTGCAGCAATGCAAGGCCTGTCTCCGGCATGTGATGTATCCGCGCTTGCGCTGCCCGCAGTGCGGCG
CAGCCGGGATGCACTGGATCCGCGCCACCGGTCGCGGGCGCCTGTATTCCTACGTCATCAATCACTTCGCGGCGCCGGGC
TGGGAGGGCGAGACGCCCTATGTGATTGCCGTGGTCGAACTCGAGGAGGGGCCGCGCATGCTGTCCAATCTGGTGGGCGT
GGCGCCCCGGCCCGAATGCCTCACGCTCGACATGCCGCTGGAGGTGGTGTTCGAGGGGCGCGGCGATCAGACGCTGCCGA
TGTTCAAGCCGGCGCCGGCGAGGGTGCCCCGATGA

Upstream 100 bases:

>100_bases
GAGCGTGTCCGAACTCGCGCAGAGGCTGCCCGATCTCGTCCGGCGCGCGGCGCCCAATGCCGAACTGAGCGGCGAAATCC
CGATGGCGGAGGCCTGACGC

Downstream 100 bases:

>100_bases
GCCGGAAGCAACACGCGGTCGCCATTGCCGGCGCCGCCGAAACCGATCTCGGCGCGTTGCCGCAGCTGTCCGAGCTGGAC
CTGCGCGCCGACGCCGCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MNANKYKPKPVPVPTPVTQPFWDGTRAGELRLQQCKACLRHVMYPRLRCPQCGAAGMHWIRATGRGRLYSYVINHFAAPG
WEGETPYVIAVVELEEGPRMLSNLVGVAPRPECLTLDMPLEVVFEGRGDQTLPMFKPAPARVPR

Sequences:

>Translated_144_residues
MNANKYKPKPVPVPTPVTQPFWDGTRAGELRLQQCKACLRHVMYPRLRCPQCGAAGMHWIRATGRGRLYSYVINHFAAPG
WEGETPYVIAVVELEEGPRMLSNLVGVAPRPECLTLDMPLEVVFEGRGDQTLPMFKPAPARVPR
>Mature_144_residues
MNANKYKPKPVPVPTPVTQPFWDGTRAGELRLQQCKACLRHVMYPRLRCPQCGAAGMHWIRATGRGRLYSYVINHFAAPG
WEGETPYVIAVVELEEGPRMLSNLVGVAPRPECLTLDMPLEVVFEGRGDQTLPMFKPAPARVPR

Specific function: Unknown

COG id: COG1545

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16125; Mature: 16125

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNANKYKPKPVPVPTPVTQPFWDGTRAGELRLQQCKACLRHVMYPRLRCPQCGAAGMHWI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE
RATGRGRLYSYVINHFAAPGWEGETPYVIAVVELEEGPRMLSNLVGVAPRPECLTLDMPL
EECCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCEEEECCCE
EVVFEGRGDQTLPMFKPAPARVPR
EEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNANKYKPKPVPVPTPVTQPFWDGTRAGELRLQQCKACLRHVMYPRLRCPQCGAAGMHWI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE
RATGRGRLYSYVINHFAAPGWEGETPYVIAVVELEEGPRMLSNLVGVAPRPECLTLDMPL
EECCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCEEEECCCE
EVVFEGRGDQTLPMFKPAPARVPR
EEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA