Click here to switch to the map view.

The map label for this gene is ligA

Identifier: 121602535

GI number:

Start: 963536

End: 965689

Strand: Reverse

Name: ligA

Synonym: BARBAKC583_0937

Alternate gene names: NA

Gene position: NA

Preceding gene: 121602605

Following gene: 121602444

Centisome position: NA

GC content: NA

Gene sequence:

>2154_bases
ATGGATAAGGATGCGAAAAATTTAACTGCTCTCGAAGCAGAGCGTGAGTTAGAGTGGCTAGCAAAAGAAATTGCGCGTCA
CGATGTGCTTTATAACAATCATGACCAGCCTGAAATTTCTGATGCACGATATGATGCTCTTCGTCGTCGTAATATAGAAA
TTGAGACTCTATTTCCTGAATTGGTTCGAGCAGATTCTCCTTCATATAAAGTTGGTGCTCCAATTTCTGAAAGATTTGAA
AAATCTGTTCATGCACAGGCGATGTTATCCCTTGATAATGCGTTTAGTTCTGAAGATGTTCATGAATTTGTTGAGCGTGT
TCGTCGTTTTTTACGACTTCCAGTGACAAAAACATTGGAGATGACAGCTGAACCGAAAATTGATGGTCTGTCTTTGTCTT
TACGTTATGAAAAAGGAAAGCTTGTGTGTGCAGCAACCCGTGGTGATGGGTATGTAGGCGAAAATGTTACTGTGAATGCA
CGAACACTTTCTGATATTCCTCAGGTTTTACAAGGTGATTTTCCTGATATTCTTGAGGTTCGTGGTGAAGTGTATATGAG
ACACAGTGATTTCCAAGACCTTAATGTGGATCAACAAGAAAAAGGAAAGTTGGTTTTTGCTAATCCTAGAAACGCTGCTG
CAGGTTCTTTGCGTCAGCTCGATACGCGAATGACTGCTCGTAGAAAACTTAAATTTTTTGCTTATGGTTGGGGTGAAGTG
AGTGAAATGCCAGCTAAAAGCCAAATGGAGATGGTAAAGAAGCTAAAAGAATATGGCTTTGTTATCAACCCATTAACAAA
AGTTTTTAAGGCAGTAGAAGACCTTATTTCATATTATCATTTTATCGAAGAAGGTCGTCAACATTTAGACTATGATATTG
ATGGGGTTGTTTACAAGGTTAATGATTTGCTGTTGCAAACGCGTTTAGGGAATGTGTCTCGTTCACCACGGTGGGCGATT
GCACATAAATTTCCAGCAGAAAAAGCAATGGCGCTTCTAGAAAATATTGACATCCAAATAGGTCGAACAGGAGCATTAAC
GCCCGTTGCGCGTCTCGCACCTATTACGGTAGGTGGAGTTGTGGTTACTAATGCAAGCTTGCATAATGAAGATTATATCA
AGGGGCTTGGGAGTAAAAGTGAATCTATTCGCGAAGGGCGTGATATCCGTATAGGTGATACAGTCATTGTACAGCGTGCG
GGTGATGTAATTCCCCAGATTATTGATGTTATAATTGAAAAGCGTCCAAAAGGTGCGTCTCCTTTTGTTTTTCCCTCTCT
TTGTCCTGCTTGTGGGAGTCACGCTGTTCGTGAAGTGGGTGAAGCAGTGCGCCGGTGTACAGGTGGGTTGATTTGTCCAG
CGCAAGCGATTGAACGTATTCGTCATTTTGTTTCGCGCAATGCTTTTGATATTGAGGGGCTTGGTGAAAAACAGGTAGAA
TTTTTCTTTCATGCTCAAGATGAGACACTACGTATTCACTCACCAGCTGATATTTTTACTTTACAAAAACGCCAAGAAAA
ATCTCTAACACGGTTAGAAAATATGGAGGGGTTTGGAACTCTTTCTGTTCGCAAACTTTATGATGCTATTAATGCTCGCC
GAAAAATTCCTTTAAGCCGCTTTTTATTTGCATTAGGAATTCGTCATGTTGGAGAGGTCAATGCACGGCGTCTTGCACGG
GCCTATCAAAATTATAATGCTTTTGAGACTGTAGCGATGACAGCACTAATGCCATGCAATAAGGAAGATAAAGGCAATGA
GGAGTGGTTAGAACTGACGAGTATCGAAGGGATTGGAGTTCGTGTTGGTAAAGCGATTATTGATTTTTATCAGGAAACTC
ATAACCGTGATGTTTTATCGAGTTTGCTTCAAGAAGTAACACCTCTTCCTGAGGAGGCCGCAGTAGCAGATTATTCTCCT
GTTGCAGGAAAGACGATCGTTTTTACAGGAACTTTGGTGCATATGTCACGTGATGAAGTAAAAGCGTTGGCAGAACGATT
AGGAGCCAAAGCATCTAGTTCCATTTCTAAAAAAACTGATCTTCTGGTTGCAGGGATAGGAGCCGGATCGAAATTAACGA
AAGCAAAAGAGTTAGGCATTGAGATTATGGATGAAGAAAGTTGGCTTCAATTAATTAATGAGCATCATATTTAA

Upstream 100 bases:

>100_bases
AATGATTGATAGTGATACAGGTAAGCATATATTTTTAGATTTTTGTTGCTAAAAAAGTGGAAATTTGTGCTGATTATAGC
GCGTGATTAGAAGAGAATTG

Downstream 100 bases:

>100_bases
GTTTTTTGCAAAATAACATTGATGATATGTTTATGCATTAATGCTATTTGGCTATGTGGTACACCATATAAAATTCTGGT
AATTTTTTAATTTTTCTCTT

Product: NAD-dependent DNA ligase LigA

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>717_residues
MDKDAKNLTALEAERELEWLAKEIARHDVLYNNHDQPEISDARYDALRRRNIEIETLFPELVRADSPSYKVGAPISERFE
KSVHAQAMLSLDNAFSSEDVHEFVERVRRFLRLPVTKTLEMTAEPKIDGLSLSLRYEKGKLVCAATRGDGYVGENVTVNA
RTLSDIPQVLQGDFPDILEVRGEVYMRHSDFQDLNVDQQEKGKLVFANPRNAAAGSLRQLDTRMTARRKLKFFAYGWGEV
SEMPAKSQMEMVKKLKEYGFVINPLTKVFKAVEDLISYYHFIEEGRQHLDYDIDGVVYKVNDLLLQTRLGNVSRSPRWAI
AHKFPAEKAMALLENIDIQIGRTGALTPVARLAPITVGGVVVTNASLHNEDYIKGLGSKSESIREGRDIRIGDTVIVQRA
GDVIPQIIDVIIEKRPKGASPFVFPSLCPACGSHAVREVGEAVRRCTGGLICPAQAIERIRHFVSRNAFDIEGLGEKQVE
FFFHAQDETLRIHSPADIFTLQKRQEKSLTRLENMEGFGTLSVRKLYDAINARRKIPLSRFLFALGIRHVGEVNARRLAR
AYQNYNAFETVAMTALMPCNKEDKGNEEWLELTSIEGIGVRVGKAIIDFYQETHNRDVLSSLLQEVTPLPEEAAVADYSP
VAGKTIVFTGTLVHMSRDEVKALAERLGAKASSSISKKTDLLVAGIGAGSKLTKAKELGIEIMDEESWLQLINEHHI

Sequences:
NA

Specific function: NA

COG id: COG0272

COG function: function code L; NAD-dependent DNA ligase (contains BRCT domain type II)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA