Click here to switch to the map view.

The map label for this gene is espF

Identifier: 121639783

GI number: 121639783

Start: 4314015

End: 4314326

Strand: Direct

Name: espF

Synonym: BCG_3928

Alternate gene names: 121639783

Gene position: 4314015-4314326 (Clockwise)

Preceding gene: 121639782

Following gene: 121639784

Centisome position: 98.62

GC content: 57.37

Gene sequence:

>312_bases
ATGACCGGATTTCTCGGTGTCGTGCCTTCGTTCCTGAAGGTGCTGGCGGGCATGCACAACGAGATCGTGGGTGATATCAA
AAGGGCGACCGATACGGTCGCCGGGATTAGCGGACGAGTTCAGCTTACCCATGGTTCGTTCACGTCGAAATTCAATGACA
CGCTGCAAGAGTTTGAGACCACCCGTAGCAGCACGGGCACGGGTTTGCAGGGAGTCACCAGCGGACTGGCCAATAATCTG
CTCGCAGCCGCCGGCGCCTACCTCAAGGCCGACGATGGCCTAGCCGGTGTTATCGACAAGATTTTCGGTTGA

Upstream 100 bases:

>100_bases
GACCGTCCTTTGATCGGACACCGAGTCGCCAGCAGGTCTGTGCCATAGCGAGTCGAAGCCATAGCGAGTAGAAAGTTAAA
CGTAGAGGAGGGTTCAACCC

Downstream 100 bases:

>100_bases
TCATGACGGGTCCGTCCGCTGCAGGCCGCGCGGGCACCGCCGACAACGTGGTCGGCGTCGAGGTAACCATCGACGGCATG
TTGGTGATCGCCGATCGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MTGFLGVVPSFLKVLAGMHNEIVGDIKRATDTVAGISGRVQLTHGSFTSKFNDTLQEFETTRSSTGTGLQGVTSGLANNL
LAAAGAYLKADDGLAGVIDKIFG

Sequences:

>Translated_103_residues
MTGFLGVVPSFLKVLAGMHNEIVGDIKRATDTVAGISGRVQLTHGSFTSKFNDTLQEFETTRSSTGTGLQGVTSGLANNL
LAAAGAYLKADDGLAGVIDKIFG
>Mature_102_residues
TGFLGVVPSFLKVLAGMHNEIVGDIKRATDTVAGISGRVQLTHGSFTSKFNDTLQEFETTRSSTGTGLQGVTSGLANNLL
AAAGAYLKADDGLAGVIDKIFG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EspC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ESPF_MYCTU (P96212)

Other databases:

- EMBL:   BX842584
- EMBL:   AE000516
- PIR:   F70656
- RefSeq:   NP_218382.1
- RefSeq:   NP_338534.1
- EnsemblBacteria:   EBMYCT00000003714
- EnsemblBacteria:   EBMYCT00000072695
- GeneID:   886172
- GeneID:   926295
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT3979
- KEGG:   mtu:Rv3865
- TIGR:   MT3979
- TubercuList:   Rv3865
- GeneTree:   EBGT00050000018422
- HOGENOM:   HBG569622
- OMA:   VEFETTR
- ProtClustDB:   CLSK792770
- InterPro:   IPR022536

Pfam domain/function: PF10824 DUF2580

EC number: NA

Molecular weight: Translated: 10618; Mature: 10487

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGFLGVVPSFLKVLAGMHNEIVGDIKRATDTVAGISGRVQLTHGSFTSKFNDTLQEFET
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHH
TRSSTGTGLQGVTSGLANNLLAAAGAYLKADDGLAGVIDKIFG
HHCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHCC
>Mature Secondary Structure 
TGFLGVVPSFLKVLAGMHNEIVGDIKRATDTVAGISGRVQLTHGSFTSKFNDTLQEFET
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHH
TRSSTGTGLQGVTSGLANNLLAAAGAYLKADDGLAGVIDKIFG
HHCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036