Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639781
Identifier: 121639781
GI number: 121639781
Start: 4311250
End: 4312428
Strand: Direct
Name: 121639781
Synonym: BCG_3926
Alternate gene names: NA
Gene position: 4311250-4312428 (Clockwise)
Preceding gene: 121639779
Following gene: 121639782
Centisome position: 98.55
GC content: 65.73
Gene sequence:
>1179_bases ATGGCGGGCGAGCGGAAAGTCTGCCCACCGTCCCGGCTAGTACCCGCGAATAAGGGATCAACGCAGATGTCTAAAGCAGG GTCGACTGTCGGACCGGCGCCGCTGGTCGCGTGCAGCGGCGGCACATCAGACGTGATTGAGCCCCGTCGCGGTGTCGCGA TCATTGGCCACTCGTGCCGAGTCGGCACCCAGATCGACGATTCTCGAATCTCTCAGACACATCTGCGAGCGGTATCCGAT GATGGACGGTGGCGGATCGTCGGCAACATCCCGAGAGGTATGTTCGTCGGCGGACGACGCGGCAGCTCGGTGACCGTCAG CGATAAGACCCTAATCCGATTCGGCGATCCCCCTGGAGGCAAGGCGTTGACGTTCGAAGTCGTCAGGCCGTCGGATTCCG CTGCACAGCACGGCCGCGTACAACCATCAGCGGACCTGTCGGACGACCCGGCGCACAACGCTGCGCCGGTCGCACCGGAC CCCGGCGTGGTTCGCGCAGGGGCGGCCGCGGCTGCGCGCCGTCGTGAACTTGACATCAGCCAACGCAGCTTGGCGGCCGA CGGGATCATCAACGCGGGCGCGCTCATCGCGTTCGAGAAAGGCCGTAGTTGGCCCCGGGAACGGACCCGGGCAAAACTCG AAGAAGTGCTGCAGTGGCCCGCTGGAACCATCGCGCGAATCCGTCGGGGCGAGCCCACCGAGCCCGCAACAAACCCCGAC GCGTCCCCCGGACTCCGGCCTGCCGACGGCCCGGCGTCCTTGATCGCGCAGGCTGTCACCGCCGCCGTAGACGGCTGCAG TCTGGCTATCGCAGCGTTGCCGGCGACCGAGGACCCCGAGTTCACCGAACGTGCCGCGCCGATCCTTGCTGATTTGCGCC AGCTCGAGGCGATTGCCGTCCAAGCAACCCGCATCAGCCGGATTACCCCGGAATTGATCAAGGCGTTGGGCGCGGTACGT CGCCACCACGACGAATTAATGAGGCTGGGAGCAACCGCCCCTGGTGCCACACTGGCGCAGCGCTTATATGCCGCACGGCG GCGCGCGAACCTTTCCACCCTGGAGACTGCCCAAGCGGCCGGCGTCGCAGAAGAAATGATCGTCGGCGCCGAAGCCGAGG AAGAGTTGCCAGCCGAGGCCACCGAAGCGATCGAAGCACTGATCCGTCAGATCAATTGA
Upstream 100 bases:
>100_bases CAGTTCGGTTTGGCTAGGAAACTATTTCCATAGCGGGCCGTCGCGTCGCTAGATCCAAAATGTAGCGAAGTCATAGCAGT AGAAGGGTGCAACGGTTAGG
Downstream 100 bases:
>100_bases GGTCGGCTCCGAGCGTCCCACAAGTACAGGCACGCCGTAACGCTCAAGTTCAACGGTCCGGGGAACGCGCGCGTTCTCCG GCGTTTGACGGTGCGTTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MAGERKVCPPSRLVPANKGSTQMSKAGSTVGPAPLVACSGGTSDVIEPRRGVAIIGHSCRVGTQIDDSRISQTHLRAVSD DGRWRIVGNIPRGMFVGGRRGSSVTVSDKTLIRFGDPPGGKALTFEVVRPSDSAAQHGRVQPSADLSDDPAHNAAPVAPD PGVVRAGAAAAARRRELDISQRSLAADGIINAGALIAFEKGRSWPRERTRAKLEEVLQWPAGTIARIRRGEPTEPATNPD ASPGLRPADGPASLIAQAVTAAVDGCSLAIAALPATEDPEFTERAAPILADLRQLEAIAVQATRISRITPELIKALGAVR RHHDELMRLGATAPGATLAQRLYAARRRANLSTLETAQAAGVAEEMIVGAEAEEELPAEATEAIEALIRQIN
Sequences:
>Translated_392_residues MAGERKVCPPSRLVPANKGSTQMSKAGSTVGPAPLVACSGGTSDVIEPRRGVAIIGHSCRVGTQIDDSRISQTHLRAVSD DGRWRIVGNIPRGMFVGGRRGSSVTVSDKTLIRFGDPPGGKALTFEVVRPSDSAAQHGRVQPSADLSDDPAHNAAPVAPD PGVVRAGAAAAARRRELDISQRSLAADGIINAGALIAFEKGRSWPRERTRAKLEEVLQWPAGTIARIRRGEPTEPATNPD ASPGLRPADGPASLIAQAVTAAVDGCSLAIAALPATEDPEFTERAAPILADLRQLEAIAVQATRISRITPELIKALGAVR RHHDELMRLGATAPGATLAQRLYAARRRANLSTLETAQAAGVAEEMIVGAEAEEELPAEATEAIEALIRQIN >Mature_391_residues AGERKVCPPSRLVPANKGSTQMSKAGSTVGPAPLVACSGGTSDVIEPRRGVAIIGHSCRVGTQIDDSRISQTHLRAVSDD GRWRIVGNIPRGMFVGGRRGSSVTVSDKTLIRFGDPPGGKALTFEVVRPSDSAAQHGRVQPSADLSDDPAHNAAPVAPDP GVVRAGAAAAARRRELDISQRSLAADGIINAGALIAFEKGRSWPRERTRAKLEEVLQWPAGTIARIRRGEPTEPATNPDA SPGLRPADGPASLIAQAVTAAVDGCSLAIAALPATEDPEFTERAAPILADLRQLEAIAVQATRISRITPELIKALGAVRR HHDELMRLGATAPGATLAQRLYAARRRANLSTLETAQAAGVAEEMIVGAEAEEELPAEATEAIEALIRQIN
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41088; Mature: 40957
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGERKVCPPSRLVPANKGSTQMSKAGSTVGPAPLVACSGGTSDVIEPRRGVAIIGHSCR CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCCHHHCCCCCCEEEEECCCC VGTQIDDSRISQTHLRAVSDDGRWRIVGNIPRGMFVGGRRGSSVTVSDKTLIRFGDPPGG CCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCCCEEEECCCEEEEECCCCCC KALTFEVVRPSDSAAQHGRVQPSADLSDDPAHNAAPVAPDPGVVRAGAAAAARRRELDIS CEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHCCCH QRSLAADGIINAGALIAFEKGRSWPRERTRAKLEEVLQWPAGTIARIRRGEPTEPATNPD HHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCC ASPGLRPADGPASLIAQAVTAAVDGCSLAIAALPATEDPEFTERAAPILADLRQLEAIAV CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH QATRISRITPELIKALGAVRRHHDELMRLGATAPGATLAQRLYAARRRANLSTLETAQAA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH GVAEEMIVGAEAEEELPAEATEAIEALIRQIN CHHHHHHCCCCCHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure AGERKVCPPSRLVPANKGSTQMSKAGSTVGPAPLVACSGGTSDVIEPRRGVAIIGHSCR CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCCHHHCCCCCCEEEEECCCC VGTQIDDSRISQTHLRAVSDDGRWRIVGNIPRGMFVGGRRGSSVTVSDKTLIRFGDPPGG CCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCCCEEEECCCEEEEECCCCCC KALTFEVVRPSDSAAQHGRVQPSADLSDDPAHNAAPVAPDPGVVRAGAAAAARRRELDIS CEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHCCCH QRSLAADGIINAGALIAFEKGRSWPRERTRAKLEEVLQWPAGTIARIRRGEPTEPATNPD HHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCC ASPGLRPADGPASLIAQAVTAAVDGCSLAIAALPATEDPEFTERAAPILADLRQLEAIAV CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH QATRISRITPELIKALGAVRRHHDELMRLGATAPGATLAQRLYAARRRANLSTLETAQAA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH GVAEEMIVGAEAEEELPAEATEAIEALIRQIN CHHHHHHCCCCCHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA