Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639766
Identifier: 121639766
GI number: 121639766
Start: 4294729
End: 4295637
Strand: Direct
Name: 121639766
Synonym: BCG_3911
Alternate gene names: NA
Gene position: 4294729-4295637 (Clockwise)
Preceding gene: 121639765
Following gene: 121639767
Centisome position: 98.18
GC content: 66.89
Gene sequence:
>909_bases ATGCTCGCCGCCACACTGCTAAGTCTGGGAGCCGTTTTCCTTGCTGAGCTCGGCGACAGATCCCAGCTCATCACGATGAC CTACACACTTCGCTACCGCTGGTGGGTGGTGCTGACCGGGGTGGCGATCGCAGCGTTCACGGTGCACGGGGTAGCGGTGG CGATCGGCCACTTTTTGGGCTCGACCGTGCCGGCCCGGCCGGCCGCCTGCGTATCGGCGATCGCATTCCTGATCTTTGCC GTGTGGGTCTGGCGGGAGGACACGGCCAGCGACAGCGAAACCTCGCCAACCGCTGCCGAACCCCGACTCGCGCTGTTCAC CGTGGTCTCGTCGTTCGCACTGGCTGAGCTGGGTGACAAGACAACGTTGGCGACGGTGACCTTGGCCAGCGATCACCACT GGGCCGGCGTATGGATCGGCACCACCCTGGGCATGATCCTGGCCGACGGCCTGGCGATCGGCGCAGGGCTGCTGCTGCAC CGGCGCCTTCCGGAGCGGTTGCTGCAGGTCCTGACTGGCCTGCTGTTCCTGCTGTTCGGACTGTGGTTGCTGTTCGACGA CGCGTTGGGCTTCAGATCGATTGCCATCGCCGTGACAGCGGCGGTGGTGCTGGCCGCGGCAACTACGGCGGTATCGGTGC GGGTGGCGCAAACTCGTCGGCGGCGGCCAACCGCTGCTGCAACACCAGAAGATGACTCGACACGCCCCGAGCGGTCGTCG GTCGCGCCGGGCCATCCCGGGAGCATCTTGCTACCGCTTCCGGAAGTGTCTTTGCGGGGGCGCCGACCGCCCTCAGGGTC GCCTGACGAGCGCTGTGCGGACCCAGGCAGCAAAGGAGGCTCTCGGCGAATCTCCGTTGGCTGCTGGTTGCCCGGAGTCG GCCGCATCCGCCCGACACGGTCATCCTGA
Upstream 100 bases:
>100_bases GCCCGGCTGGCGAACCGTTTGATACCAACGGTGGGCGAGACCTTCGACCGATGTTCGATGACCGACTGGTCGTCGACAAC GCGTCGAAAGGTCGCCTGCC
Downstream 100 bases:
>100_bases TCTGCTCGCCGAACACGTGGGCGACGGACCAACGCGCGTGTTTTCATCGGATATTCTGCGGATAACCTGTGAAATCCGTT CGTCGTGTGGACACATCACC
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLGSTVPARPAACVSAIAFLIFA VWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDKTTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLH RRLPERLLQVLTGLLFLLFGLWLLFDDALGFRSIAIAVTAAVVLAAATTAVSVRVAQTRRRRPTAAATPEDDSTRPERSS VAPGHPGSILLPLPEVSLRGRRPPSGSPDERCADPGSKGGSRRISVGCWLPGVGRIRPTRSS
Sequences:
>Translated_302_residues MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLGSTVPARPAACVSAIAFLIFA VWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDKTTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLH RRLPERLLQVLTGLLFLLFGLWLLFDDALGFRSIAIAVTAAVVLAAATTAVSVRVAQTRRRRPTAAATPEDDSTRPERSS VAPGHPGSILLPLPEVSLRGRRPPSGSPDERCADPGSKGGSRRISVGCWLPGVGRIRPTRSS >Mature_302_residues MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLGSTVPARPAACVSAIAFLIFA VWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDKTTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLH RRLPERLLQVLTGLLFLLFGLWLLFDDALGFRSIAIAVTAAVVLAAATTAVSVRVAQTRRRRPTAAATPEDDSTRPERSS VAPGHPGSILLPLPEVSLRGRRPPSGSPDERCADPGSKGGSRRISVGCWLPGVGRIRPTRSS
Specific function: Unknown
COG id: COG2119
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0016 (TC 9.B.26) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001727 [H]
Pfam domain/function: PF01169 UPF0016 [H]
EC number: NA
Molecular weight: Translated: 31976; Mature: 31976
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG CHHHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG CEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWLLFDDALGFRSIAIAVTAAVVLAAATTAVSVRVAQTRRRRPTAAATPEDDSTRPERSS HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC VAPGHPGSILLPLPEVSLRGRRPPSGSPDERCADPGSKGGSRRISVGCWLPGVGRIRPTR CCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEECCCCCCCCCCC SS CC >Mature Secondary Structure MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG CHHHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG CEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWLLFDDALGFRSIAIAVTAAVVLAAATTAVSVRVAQTRRRRPTAAATPEDDSTRPERSS HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC VAPGHPGSILLPLPEVSLRGRRPPSGSPDERCADPGSKGGSRRISVGCWLPGVGRIRPTR CCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEECCCCCCCCCCC SS CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]