Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639738
Identifier: 121639738
GI number: 121639738
Start: 4258376
End: 4259089
Strand: Direct
Name: 121639738
Synonym: BCG_3883
Alternate gene names: NA
Gene position: 4258376-4259089 (Clockwise)
Preceding gene: 121639736
Following gene: 121639739
Centisome position: 97.34
GC content: 63.17
Gene sequence:
>714_bases ATGTGGTCCACCGTGCTGGTCTTGGCGCTCTCGGTGATCTGCGAGCCGGTACGGATCGGTTTGGTGGTCCTCATGCTCAA CAGGCGCCGCCCGCTGCTCCATTTGCTCACATTCTTGTGCGGTGGTTACACGATGGCTGGTGGCGTGGCCATGGTGACGC TTGTGGTCCTCGGGGCCACTCCGTTGGCCGGACATTTCAGTGTGGCCGAGGTACAGATCGGGACCGGGCTGATTGCCTTG CTTATCGCGTTTGCGCTGACCACAAATGTCATAGGCAAGCATGTCCGGCGAGCTACCCACGCCCGCGTCGGAGACAACGG TGGCAGGGTCCTACGGGAGTCGGTACCGCCAAGTGGTACGCATAAGCTGGCTGTGCGTGCACGTTGTTTTCTGCAGGGCG ATTCGCTGTATGTCGCCGGGGTGAGTGGCCTAGGAGCCGCACTGCCTTCGGCCAACTACATGGGCGCGATGGCCGCCATT CTTGCCTCCGGCGCTACGCCGGCAACACAGGCACTGGCTGTCGTTACGTTCAACGTGGTGGCATTCACAGTGGCCGAAGT CCCCCTCGTCAGCTACCTGGCAGCACCGCGTAAGACCCGCGCGTTCATGGCTGCGCTGCAATCATGGCTGCGGTCCCGTA GCCGCCGCGACGCCGCGTTGCTGGTGGCCGCCGGAGGTTGCCTGATGCTCACGCTAGGCCTGAGCAACCTGTAG
Upstream 100 bases:
>100_bases GCTACGGCCAGACGGTGTGACACTCAAACCGGCGGGCGTAATTTCCTCCGACGACGCTCCGCAGACCACAATCGTCAGCG GCGGAGTACGGTTGCTCACC
Downstream 100 bases:
>100_bases GCGGCGGCGGGCTTGCCTAACGCAGAGCTCTCACATGAAATGTCCAGGCGTCTCCGACTGCGTTGCGACCGTAAGGCACG ATAACGTGTTTGCTATTGCT
Product: putative integral membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MWSTVLVLALSVICEPVRIGLVVLMLNRRRPLLHLLTFLCGGYTMAGGVAMVTLVVLGATPLAGHFSVAEVQIGTGLIAL LIAFALTTNVIGKHVRRATHARVGDNGGRVLRESVPPSGTHKLAVRARCFLQGDSLYVAGVSGLGAALPSANYMGAMAAI LASGATPATQALAVVTFNVVAFTVAEVPLVSYLAAPRKTRAFMAALQSWLRSRSRRDAALLVAAGGCLMLTLGLSNL
Sequences:
>Translated_237_residues MWSTVLVLALSVICEPVRIGLVVLMLNRRRPLLHLLTFLCGGYTMAGGVAMVTLVVLGATPLAGHFSVAEVQIGTGLIAL LIAFALTTNVIGKHVRRATHARVGDNGGRVLRESVPPSGTHKLAVRARCFLQGDSLYVAGVSGLGAALPSANYMGAMAAI LASGATPATQALAVVTFNVVAFTVAEVPLVSYLAAPRKTRAFMAALQSWLRSRSRRDAALLVAAGGCLMLTLGLSNL >Mature_237_residues MWSTVLVLALSVICEPVRIGLVVLMLNRRRPLLHLLTFLCGGYTMAGGVAMVTLVVLGATPLAGHFSVAEVQIGTGLIAL LIAFALTTNVIGKHVRRATHARVGDNGGRVLRESVPPSGTHKLAVRARCFLQGDSLYVAGVSGLGAALPSANYMGAMAAI LASGATPATQALAVVTFNVVAFTVAEVPLVSYLAAPRKTRAFMAALQSWLRSRSRRDAALLVAAGGCLMLTLGLSNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24657; Mature: 24657
Theoretical pI: Translated: 11.52; Mature: 11.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWSTVLVLALSVICEPVRIGLVVLMLNRRRPLLHLLTFLCGGYTMAGGVAMVTLVVLGAT CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC PLAGHFSVAEVQIGTGLIALLIAFALTTNVIGKHVRRATHARVGDNGGRVLRESVPPSGT CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCC HKLAVRARCFLQGDSLYVAGVSGLGAALPSANYMGAMAAILASGATPATQALAVVTFNVV HHHEEEEEEEEECCCEEEEECCHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH AFTVAEVPLVSYLAAPRKTRAFMAALQSWLRSRSRRDAALLVAAGGCLMLTLGLSNL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCC >Mature Secondary Structure MWSTVLVLALSVICEPVRIGLVVLMLNRRRPLLHLLTFLCGGYTMAGGVAMVTLVVLGAT CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC PLAGHFSVAEVQIGTGLIALLIAFALTTNVIGKHVRRATHARVGDNGGRVLRESVPPSGT CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCC HKLAVRARCFLQGDSLYVAGVSGLGAALPSANYMGAMAAILASGATPATQALAVVTFNVV HHHEEEEEEEEECCCEEEEECCHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH AFTVAEVPLVSYLAAPRKTRAFMAALQSWLRSRSRRDAALLVAAGGCLMLTLGLSNL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA