Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121639639
Identifier: 121639639
GI number: 121639639
Start: 4142104
End: 4142868
Strand: Direct
Name: 121639639
Synonym: BCG_3783
Alternate gene names: NA
Gene position: 4142104-4142868 (Clockwise)
Preceding gene: 121639636
Following gene: 121639640
Centisome position: 94.69
GC content: 67.19
Gene sequence:
>765_bases ATGGGGCGCAAGGTCGCCGTGCTGTGGCACGCGTCGTTTTCGATTGGCGCCGGCGTCCTCTACTTCTATTTCGTATTGCC CCGTTGGCCTGAGCTGATGGGTGACACCGGACACTCGCTGGGGACTGGGCTCCGGATTGCCACGGGCGCGTTGGTCGGTC TGGCCGCACTGCCGGTGGTATTCACTTTGCTGCGCACCCGCAAGCCGGAGCTGGGCACCCCGCAGCTGGCGCTGTCAATG CGAATCTGGTCGATCATGGCTCACGTGCTGGCCGGCGCGCTGATCGTCGGCACCGCGATTAGCGAGGTCTGGCTCAGCCT GGATGCCGCCGGGCAGTGGTTGTTCGGGATCTACGGAGCTGCCGCCGCGATCGCGGTGCTCGGGTTCTTCGGGTTCTACC TGTCGTTTGTCGCCGAGCTGCCGCCGCCACCGCCGAAGCCGCTCAAGCCGAAGAAACCCAAGCAGCGACGCCTTCGCCGC AAGAAGACGGCCAAGGGCGACGAGGCTGAGCCGGAAGCCGCCGAAGAAGCCGAGAACACGGAGCTGGCGGCGCAGGAGGA CGAGGAGGCCGTCGAAGCTCCCCCGGAAAGCATAGAAAGCCCGGGAGGTGAACCCGAGTCGGCGACCCGGGAAGCTCCGG CAGCAGAGACCGCCACCGCCGAGGAGCCCCGGGGCGGGTTACGGAATCGCCGCCCCACCGGCAAAACCTCACATCGACGC CGGCGCACTCGCAGCGGTGTCCAGGTCGCCAAGGTCGACGAATAG
Upstream 100 bases:
>100_bases TGGTCCGCAGCGCGGACGGGAACGCGGACGGGAACGCGGACGGGAACAATGTGGGCTGGTCGGCTTCTCACCGGCTCGGT TCACCAGCCTAAGGAGGGGT
Downstream 100 bases:
>100_bases CCGCGGTCAGGTGCTGTAGCGGCGGCTGTGAACCCTGCGACGCAATGTCGGCGTGTCACGTTGTCGGATTCACTGTCGCC GGCTAGCGCTTTCCCGTCAG
Product: putative transmembrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVVFTLLRTRKPELGTPQLALSM RIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGAAAAIAVLGFFGFYLSFVAELPPPPPKPLKPKKPKQRRLRR KKTAKGDEAEPEAAEEAENTELAAQEDEEAVEAPPESIESPGGEPESATREAPAAETATAEEPRGGLRNRRPTGKTSHRR RRTRSGVQVAKVDE
Sequences:
>Translated_254_residues MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVVFTLLRTRKPELGTPQLALSM RIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGAAAAIAVLGFFGFYLSFVAELPPPPPKPLKPKKPKQRRLRR KKTAKGDEAEPEAAEEAENTELAAQEDEEAVEAPPESIESPGGEPESATREAPAAETATAEEPRGGLRNRRPTGKTSHRR RRTRSGVQVAKVDE >Mature_253_residues GRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVVFTLLRTRKPELGTPQLALSMR IWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGAAAAIAVLGFFGFYLSFVAELPPPPPKPLKPKKPKQRRLRRK KTAKGDEAEPEAAEEAENTELAAQEDEEAVEAPPESIESPGGEPESATREAPAAETATAEEPRGGLRNRRPTGKTSHRRR RTRSGVQVAKVDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27368; Mature: 27236
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVV CCCEEEEEEECCHHHHHHHHHHHHHHHCCHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHH FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAIAVLGFFGFYLSFVAELPPPPPKPLKPKKPKQRRLRRKKTAKGDEAEPEAAEEAENT HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCC ELAAQEDEEAVEAPPESIESPGGEPESATREAPAAETATAEEPRGGLRNRRPTGKTSHRR CCCCCCCHHHHHCCCHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH RRTRSGVQVAKVDE HHHHCCCEEEECCC >Mature Secondary Structure GRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVV CCEEEEEEECCHHHHHHHHHHHHHHHCCHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHH FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAIAVLGFFGFYLSFVAELPPPPPKPLKPKKPKQRRLRRKKTAKGDEAEPEAAEEAENT HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCC ELAAQEDEEAVEAPPESIESPGGEPESATREAPAAETATAEEPRGGLRNRRPTGKTSHRR CCCCCCCHHHHHCCCHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH RRTRSGVQVAKVDE HHHHCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA