Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639609
Identifier: 121639609
GI number: 121639609
Start: 4110319
End: 4111251
Strand: Direct
Name: 121639609
Synonym: BCG_3754
Alternate gene names: NA
Gene position: 4110319-4111251 (Clockwise)
Preceding gene: 121639607
Following gene: 121639613
Centisome position: 93.96
GC content: 67.42
Gene sequence:
>933_bases ATGTCGGAGGTGGTGACCGGCGACGCCGTGGTGCTCGACGTACAGATCGCCCAGTTGCCGGTGCGCGCGGTCAGCGCGGT CATCGATATCACCATAATATTCATCGGCTACATCCTCGGTCTGATGCTGTGGGCGACCGCCCTGACCCAGTTCGACGAAG CCTTGACCACCGCATTCCTGATCATCTTCACGGTGCTGGCGCTGGTCGGCTATCCCCTGGTCTGGGAAACCGCAACGCGG GGCCGATCAGTGGGGAAGATCGTGATGGGTCTGCGGGTGGTGTCAGACGACGGTGGCCCGGAGCGGTTCCGGCAGGCGCT GTTTCGCGCGTTAGCGTCGGTGGTGGAGATCTGGATGCTGCTCGGGAGCCCCGCCGTGATCTGCAGCATGTTGTCGCCAA AAGCCAAGCGAGTCGGCGACGTCTTCGCGGGCACGGTCGTTGTCAGCGAACGTGGTCCGCGGTTGGGGCCGCCGCCGGTG ATGCCACCGTCGCTGGCCTGGTGGGCGTCGTCGCTGCAATTGTCTGGGCTTACCGCCGGCCAAGCCGAGGTTGCACGTCA ATTTCTGGTGCGGGCACCGCAACTCGATCCTGCGCTACGCGAGCAGATGGCCTACCGGATCGCCGGTGATGTGGTTGCCC GCATCGCTCCGCCGCCGCCACCCGGAGTTCCACCACAGTTGGTCCTGGCCGCCGTCCTCGCCGAACGACACCGGCGTGAA CTGTTGCGACTGCGTCCCACGCTGCCTCCCGCAGGACAGGCGCCATGGGCCCAAATGGCGCCTCATCGGGGTTGGCCGCC CGGTTTGTCCGGCGCCACGCCGTGGTCTCCTCAGCAGCCGGTGATCCCCTGGCCGGAGCCAGATCCGCCACCGCAAGCCG CTCCCTGGCCGCAGCAGGCGCCGGACGGCCCGGGATTCTCGCCGCCGGGCTAG
Upstream 100 bases:
>100_bases GACGTCCACCCTGCGCAGCCTACCTAAGCCGCCGAGCGTGAGCGGTGGCCAATGCCGAGTGCAGCAGAGCACCGCACCAA AGCCTGTAGCGTTTGTTGGT
Downstream 100 bases:
>100_bases CAGCTAGTCTTCGCTGCGCCGGATCCCCCGAGCGTGCGGACATGTTCAGGCGCACAGCGAAAGCTAGGACACGTCAACCC AATCCAGGGTCCGCTGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: RDD Domain-Containing Protein; Integral Membrane Protein; RDD Family Domain-Containing Protein; Conserved Membrane Protein; TransRDD Family Protein
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MSEVVTGDAVVLDVQIAQLPVRAVSAVIDITIIFIGYILGLMLWATALTQFDEALTTAFLIIFTVLALVGYPLVWETATR GRSVGKIVMGLRVVSDDGGPERFRQALFRALASVVEIWMLLGSPAVICSMLSPKAKRVGDVFAGTVVVSERGPRLGPPPV MPPSLAWWASSLQLSGLTAGQAEVARQFLVRAPQLDPALREQMAYRIAGDVVARIAPPPPPGVPPQLVLAAVLAERHRRE LLRLRPTLPPAGQAPWAQMAPHRGWPPGLSGATPWSPQQPVIPWPEPDPPPQAAPWPQQAPDGPGFSPPG
Sequences:
>Translated_310_residues MSEVVTGDAVVLDVQIAQLPVRAVSAVIDITIIFIGYILGLMLWATALTQFDEALTTAFLIIFTVLALVGYPLVWETATR GRSVGKIVMGLRVVSDDGGPERFRQALFRALASVVEIWMLLGSPAVICSMLSPKAKRVGDVFAGTVVVSERGPRLGPPPV MPPSLAWWASSLQLSGLTAGQAEVARQFLVRAPQLDPALREQMAYRIAGDVVARIAPPPPPGVPPQLVLAAVLAERHRRE LLRLRPTLPPAGQAPWAQMAPHRGWPPGLSGATPWSPQQPVIPWPEPDPPPQAAPWPQQAPDGPGFSPPG >Mature_309_residues SEVVTGDAVVLDVQIAQLPVRAVSAVIDITIIFIGYILGLMLWATALTQFDEALTTAFLIIFTVLALVGYPLVWETATRG RSVGKIVMGLRVVSDDGGPERFRQALFRALASVVEIWMLLGSPAVICSMLSPKAKRVGDVFAGTVVVSERGPRLGPPPVM PPSLAWWASSLQLSGLTAGQAEVARQFLVRAPQLDPALREQMAYRIAGDVVARIAPPPPPGVPPQLVLAAVLAERHRREL LRLRPTLPPAGQAPWAQMAPHRGWPPGLSGATPWSPQQPVIPWPEPDPPPQAAPWPQQAPDGPGFSPPG
Specific function: Unknown
COG id: COG1714
COG function: function code S; Predicted membrane protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33168; Mature: 33037
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVVTGDAVVLDVQIAQLPVRAVSAVIDITIIFIGYILGLMLWATALTQFDEALTTAFL CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIFTVLALVGYPLVWETATRGRSVGKIVMGLRVVSDDGGPERFRQALFRALASVVEIWML HHHHHHHHHCCCCEEHHHHCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHH LGSPAVICSMLSPKAKRVGDVFAGTVVVSERGPRLGPPPVMPPSLAWWASSLQLSGLTAG HCCHHHHHHHHCHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC QAEVARQFLVRAPQLDPALREQMAYRIAGDVVARIAPPPPPGVPPQLVLAAVLAERHRRE HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH LLRLRPTLPPAGQAPWAQMAPHRGWPPGLSGATPWSPQQPVIPWPEPDPPPQAAPWPQQA HHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PDGPGFSPPG CCCCCCCCCC >Mature Secondary Structure SEVVTGDAVVLDVQIAQLPVRAVSAVIDITIIFIGYILGLMLWATALTQFDEALTTAFL CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIFTVLALVGYPLVWETATRGRSVGKIVMGLRVVSDDGGPERFRQALFRALASVVEIWML HHHHHHHHHCCCCEEHHHHCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHH LGSPAVICSMLSPKAKRVGDVFAGTVVVSERGPRLGPPPVMPPSLAWWASSLQLSGLTAG HCCHHHHHHHHCHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC QAEVARQFLVRAPQLDPALREQMAYRIAGDVVARIAPPPPPGVPPQLVLAAVLAERHRRE HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH LLRLRPTLPPAGQAPWAQMAPHRGWPPGLSGATPWSPQQPVIPWPEPDPPPQAAPWPQQA HHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PDGPGFSPPG CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA