Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639497
Identifier: 121639497
GI number: 121639497
Start: 3998154
End: 3999020
Strand: Direct
Name: 121639497
Synonym: BCG_3642
Alternate gene names: NA
Gene position: 3998154-3999020 (Clockwise)
Preceding gene: 121639496
Following gene: 121639498
Centisome position: 91.4
GC content: 67.24
Gene sequence:
>867_bases GTGCCTACCGCCAGATCCGATGCTCCGTTGTCGGTGACCTGGATGGGCGTTGCGACGCTGCTGGTCGACGACGGATCGTC GGCCCTGATGACTGATGGCTACTTTTCCCGGCCCGGCCTGGCACGGGTGGCGGCGGGTAAAGTGTCGCCGTCAGCGGAGC GGGTCGACGGTTGCCTTGCCCGGGCCAATGTCTCCCGGCTGACGGCCGTTATCCCGGTGCACACTCACATCGACCACGCG ATGGATTCCGCGCTGGTCGCCGACCGTACCGGAGCCCAGCTGGTCGGGGGGGAGTCGGCGGCCAATGTCGGGCGCGGATA CGGGTTGCCTGAGGAGTCTCTTGTCGTCGCCGTCCCAGGTGAACCAATCCAGTTGGGCGCCTTCGACGTGACGTTGGTGG AGTCGCATCACTGCCCACCCGACCGGTTTCCCGGTGTGATCAGCGCACCACTGACACCGCCGGTGAAGGCGTCGGCCTAC CGCTGCGGTGAGGCGTGGTCGACGCTGGTGCACCACCGGCCATCGGGGCGCCGGCTGTTAATCCAGGACAGCGCCGGTTT CGTCAGCGGCGCACTGGCCGGTTACCGCGCCGATGCCGCCTACCTCAGTGTCGGCCAGCTCGGCCTGCAACCGCCGTCAT ACCTGCTCGAATACTGGACCGAGACCGTGCGCACGGTGGGCGTCCGCCGCGTGATTCTCATCCACTGGGACGACTTTTTT CGGCCGCTGTCAAAGCCGTTGCGGGCCTTGCCATATGCGGCCGACGACCTAGACCTGTCGATCCGCATCCTCGACGAGCT GGCCGCCCAGGACGGCGTCGCGCTGCAGATGCCGACGGTGTGGCGCCGCGAGGATCCCTGGATGTGA
Upstream 100 bases:
>100_bases GTGGCCACCCGAATGCCGCGGGAACCGCGATCAAGGACCGCCGCTGATGCGGCCGAAACTTGGGCGTCCCAATATCGCGC GGTATTCCAACAGGTTTAGC
Downstream 100 bases:
>100_bases AGCGCTCTAGCCCTTGACACTTGCTGTTGCGCTGATACTGCTTGCCGTGGTCCTGGGGTTCGCGGTTGCCCGCCCACGCG GCTGGCCGGAGGCAGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Metallo-Beta-Lactamase Superfamily Protein; Secreted Protein; Beta-Lactamase Domain-Containing Protein; Zinc-Dependent Hydrolase
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MPTARSDAPLSVTWMGVATLLVDDGSSALMTDGYFSRPGLARVAAGKVSPSAERVDGCLARANVSRLTAVIPVHTHIDHA MDSALVADRTGAQLVGGESAANVGRGYGLPEESLVVAVPGEPIQLGAFDVTLVESHHCPPDRFPGVISAPLTPPVKASAY RCGEAWSTLVHHRPSGRRLLIQDSAGFVSGALAGYRADAAYLSVGQLGLQPPSYLLEYWTETVRTVGVRRVILIHWDDFF RPLSKPLRALPYAADDLDLSIRILDELAAQDGVALQMPTVWRREDPWM
Sequences:
>Translated_288_residues MPTARSDAPLSVTWMGVATLLVDDGSSALMTDGYFSRPGLARVAAGKVSPSAERVDGCLARANVSRLTAVIPVHTHIDHA MDSALVADRTGAQLVGGESAANVGRGYGLPEESLVVAVPGEPIQLGAFDVTLVESHHCPPDRFPGVISAPLTPPVKASAY RCGEAWSTLVHHRPSGRRLLIQDSAGFVSGALAGYRADAAYLSVGQLGLQPPSYLLEYWTETVRTVGVRRVILIHWDDFF RPLSKPLRALPYAADDLDLSIRILDELAAQDGVALQMPTVWRREDPWM >Mature_287_residues PTARSDAPLSVTWMGVATLLVDDGSSALMTDGYFSRPGLARVAAGKVSPSAERVDGCLARANVSRLTAVIPVHTHIDHAM DSALVADRTGAQLVGGESAANVGRGYGLPEESLVVAVPGEPIQLGAFDVTLVESHHCPPDRFPGVISAPLTPPVKASAYR CGEAWSTLVHHRPSGRRLLIQDSAGFVSGALAGYRADAAYLSVGQLGLQPPSYLLEYWTETVRTVGVRRVILIHWDDFFR PLSKPLRALPYAADDLDLSIRILDELAAQDGVALQMPTVWRREDPWM
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30926; Mature: 30794
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTARSDAPLSVTWMGVATLLVDDGSSALMTDGYFSRPGLARVAAGKVSPSAERVDGCLA CCCCCCCCCEEEEEEEEEEEEEECCCCEEEECCCCCCCCHHHHHCCCCCCCHHHHHHHHH RANVSRLTAVIPVHTHIDHAMDSALVADRTGAQLVGGESAANVGRGYGLPEESLVVAVPG HCCHHHEEEEEEEHHHHHHHHHHHHHHCCCCCEEECCCCHHHCCCCCCCCCCCEEEEECC EPIQLGAFDVTLVESHHCPPDRFPGVISAPLTPPVKASAYRCGEAWSTLVHHRPSGRRLL CCEEECEEEEEEEECCCCCHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEE IQDSAGFVSGALAGYRADAAYLSVGQLGLQPPSYLLEYWTETVRTVGVRRVILIHWDDFF EECCCCHHHHHHHCCCCCHHHEEHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEECHHHH RPLSKPLRALPYAADDLDLSIRILDELAAQDGVALQMPTVWRREDPWM HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCC >Mature Secondary Structure PTARSDAPLSVTWMGVATLLVDDGSSALMTDGYFSRPGLARVAAGKVSPSAERVDGCLA CCCCCCCCEEEEEEEEEEEEEECCCCEEEECCCCCCCCHHHHHCCCCCCCHHHHHHHHH RANVSRLTAVIPVHTHIDHAMDSALVADRTGAQLVGGESAANVGRGYGLPEESLVVAVPG HCCHHHEEEEEEEHHHHHHHHHHHHHHCCCCCEEECCCCHHHCCCCCCCCCCCEEEEECC EPIQLGAFDVTLVESHHCPPDRFPGVISAPLTPPVKASAYRCGEAWSTLVHHRPSGRRLL CCEEECEEEEEEEECCCCCHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEE IQDSAGFVSGALAGYRADAAYLSVGQLGLQPPSYLLEYWTETVRTVGVRRVILIHWDDFF EECCCCHHHHHHHCCCCCHHHEEHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEECHHHH RPLSKPLRALPYAADDLDLSIRILDELAAQDGVALQMPTVWRREDPWM HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA