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The map label for this gene is fadE26 [H]

Identifier: 121639423

GI number: 121639423

Start: 3901968

End: 3903170

Strand: Direct

Name: fadE26 [H]

Synonym: BCG_3568

Alternate gene names: 121639423

Gene position: 3901968-3903170 (Clockwise)

Preceding gene: 121639410

Following gene: 121639424

Centisome position: 89.2

GC content: 65.92

Gene sequence:

>1203_bases
ATGCGCATCAGTTACACCCCGCAGCAGGAGGAGCTGCGCCGCGAGCTGCGCTCGTACTTTGCCACGTTGATGACGCCGGA
ACGCCGGGAGGCGCTGAGCTCGGTCCAGGGTGAATACGGCGTCGGCAATGTCTACCGGGAGACGATCGCGCAAATGGGCC
GCGACGGGTGGCTTGCGCTGGGCTGGCCCAAGGAATACGGCGGCCAGGGCCGCTCGGCGATGGACCAGCTGATCTTCACC
GATGAAGCCGCCATCGCCGGTGCACCGGTGCCGTTCCTGACCATCAACAGCGTGGCGCCGACGATCATGGCCTACGGAAC
CGACGAGCAGAAGAGGTTTTTCCTGCCCCGGATCGCCGCCGGGGACCTGCACTTCTCGATCGGCTACTCCGAGCCCGGCG
CCGGCACCGACCTGGCCAACCTGCGCACCACCGCGGTTCGCGACGGCGATGACTATGTGGTCAACGGCCAGAAGATGTGG
ACCAGCCTGATTCAGTACGCCGACTACGTCTGGTTAGCGGTACGCACCAACCCGGAGTCTTCTGGGGCCAAAAAACACCG
TGGCATATCGGTGTTAATCGTGCCGACGACCGCTGAGGGCTTCTCCTGGACTCCAGTGCACACCATGGCCGGTCCGGACA
CCAGCGCCACCTACTACTCCGACGTGCGGGTACCGGTGGCCAACCGGGTCGGTGAGGAAAACGCCGGCTGGAAGCTGGTG
ACCAACCAGCTCAACCACGAGCGGGTCGCCCTGGTGTCGCCGGCACCGATTTTCGGATGCCTGCGCGAGGTCCGCGAATG
GGCACAAAACACCAAGGACGCCGGCGGCACCAGGCTGATCGACTCGGAGTGGGTGCAGCTCAACCTGGCCCGGGTACACG
CCAAGGCCGAAGTCCTCAAGCTGATCAACTGGGAGCTGGCTTCCTCGCAAAGTGGGCCGAAGGACGCTGGACCGTCACCG
GCCGATGCGTCGGCGGCCAAGGTGTTCGGTACCGAGCTGGCCACCGAGGCCTACCGGCTGCTGATGGAGGTGTTGGGCAC
TGCGGCGACCCTGCGCCAGAATTCGCCAGGCGCGTTGCTGCGCGGCCGCGTCGAACGGATGCACCGGGCGTGCCTGATCC
TGACGTTCGGCGGCGGCACCAACGAAGTCCAGCGCGACATCATCGGCATGGTCGCGCTGGGACTGCCGCGAGCCAACCGC
TGA

Upstream 100 bases:

>100_bases
AAGACGGCCGGGTTGCCGTTGGCGTTGGTTGTCGACAGCTAGTGGACGGCTGCTGACGGCCAGTGATAAAGACGCGATCA
TTCAATCGGAGGCAGCTGAG

Downstream 100 bases:

>100_bases
GCGGACCTGAGAGGACAAGACGTCATGGATTTCACGACAACCGAAGCCGCCCAGGATCTTGGTGGTCTGGTCGACACCAT
CGTGGACGCGGTGTGCACGC

Product: putative acyl-CoA dehydrogenase fadE26

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MRISYTPQQEELRRELRSYFATLMTPERREALSSVQGEYGVGNVYRETIAQMGRDGWLALGWPKEYGGQGRSAMDQLIFT
DEAAIAGAPVPFLTINSVAPTIMAYGTDEQKRFFLPRIAAGDLHFSIGYSEPGAGTDLANLRTTAVRDGDDYVVNGQKMW
TSLIQYADYVWLAVRTNPESSGAKKHRGISVLIVPTTAEGFSWTPVHTMAGPDTSATYYSDVRVPVANRVGEENAGWKLV
TNQLNHERVALVSPAPIFGCLREVREWAQNTKDAGGTRLIDSEWVQLNLARVHAKAEVLKLINWELASSQSGPKDAGPSP
ADASAAKVFGTELATEAYRLLMEVLGTAATLRQNSPGALLRGRVERMHRACLILTFGGGTNEVQRDIIGMVALGLPRANR

Sequences:

>Translated_400_residues
MRISYTPQQEELRRELRSYFATLMTPERREALSSVQGEYGVGNVYRETIAQMGRDGWLALGWPKEYGGQGRSAMDQLIFT
DEAAIAGAPVPFLTINSVAPTIMAYGTDEQKRFFLPRIAAGDLHFSIGYSEPGAGTDLANLRTTAVRDGDDYVVNGQKMW
TSLIQYADYVWLAVRTNPESSGAKKHRGISVLIVPTTAEGFSWTPVHTMAGPDTSATYYSDVRVPVANRVGEENAGWKLV
TNQLNHERVALVSPAPIFGCLREVREWAQNTKDAGGTRLIDSEWVQLNLARVHAKAEVLKLINWELASSQSGPKDAGPSP
ADASAAKVFGTELATEAYRLLMEVLGTAATLRQNSPGALLRGRVERMHRACLILTFGGGTNEVQRDIIGMVALGLPRANR
>Mature_400_residues
MRISYTPQQEELRRELRSYFATLMTPERREALSSVQGEYGVGNVYRETIAQMGRDGWLALGWPKEYGGQGRSAMDQLIFT
DEAAIAGAPVPFLTINSVAPTIMAYGTDEQKRFFLPRIAAGDLHFSIGYSEPGAGTDLANLRTTAVRDGDDYVVNGQKMW
TSLIQYADYVWLAVRTNPESSGAKKHRGISVLIVPTTAEGFSWTPVHTMAGPDTSATYYSDVRVPVANRVGEENAGWKLV
TNQLNHERVALVSPAPIFGCLREVREWAQNTKDAGGTRLIDSEWVQLNLARVHAKAEVLKLINWELASSQSGPKDAGPSP
ADASAAKVFGTELATEAYRLLMEVLGTAATLRQNSPGALLRGRVERMHRACLILTFGGGTNEVQRDIIGMVALGLPRANR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=397, Percent_Identity=26.9521410579345, Blast_Score=129, Evalue=5e-30,
Organism=Homo sapiens, GI226958412, Length=398, Percent_Identity=24.1206030150754, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI226958414, Length=353, Percent_Identity=24.929178470255, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI4557231, Length=399, Percent_Identity=25.5639097744361, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI187960098, Length=399, Percent_Identity=25.5639097744361, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI4501859, Length=351, Percent_Identity=26.7806267806268, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI4557233, Length=398, Percent_Identity=24.8743718592965, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI21361497, Length=369, Percent_Identity=26.5582655826558, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI76496475, Length=397, Percent_Identity=25.4408060453401, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI4557235, Length=397, Percent_Identity=25.4408060453401, Blast_Score=99, Evalue=8e-21,
Organism=Homo sapiens, GI7656849, Length=389, Percent_Identity=27.5064267352185, Blast_Score=99, Evalue=8e-21,
Organism=Escherichia coli, GI87081958, Length=398, Percent_Identity=24.8743718592965, Blast_Score=88, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17508101, Length=381, Percent_Identity=27.5590551181102, Blast_Score=132, Evalue=4e-31,
Organism=Caenorhabditis elegans, GI17570075, Length=399, Percent_Identity=27.5689223057644, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI17551932, Length=362, Percent_Identity=30.1104972375691, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17506239, Length=343, Percent_Identity=28.2798833819242, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17534899, Length=352, Percent_Identity=27.8409090909091, Blast_Score=117, Evalue=8e-27,
Organism=Caenorhabditis elegans, GI17505929, Length=347, Percent_Identity=29.6829971181556, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71990804, Length=285, Percent_Identity=27.719298245614, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17569725, Length=356, Percent_Identity=25.2808988764045, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI32563615, Length=233, Percent_Identity=31.7596566523605, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17538396, Length=353, Percent_Identity=24.6458923512748, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17533517, Length=355, Percent_Identity=26.1971830985915, Blast_Score=94, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI71985184, Length=298, Percent_Identity=26.1744966442953, Blast_Score=88, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI71985192, Length=183, Percent_Identity=30.0546448087432, Blast_Score=85, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI71982178, Length=235, Percent_Identity=28.0851063829787, Blast_Score=78, Evalue=9e-15,
Organism=Drosophila melanogaster, GI21355753, Length=353, Percent_Identity=28.6118980169972, Blast_Score=122, Evalue=3e-28,
Organism=Drosophila melanogaster, GI21356377, Length=351, Percent_Identity=27.9202279202279, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI281363737, Length=411, Percent_Identity=25.7907542579075, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI24666513, Length=300, Percent_Identity=27.3333333333333, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24646207, Length=365, Percent_Identity=26.027397260274, Blast_Score=95, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24660351, Length=295, Percent_Identity=27.7966101694915, Blast_Score=88, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 43785; Mature: 43785

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRISYTPQQEELRRELRSYFATLMTPERREALSSVQGEYGVGNVYRETIAQMGRDGWLAL
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEE
GWPKEYGGQGRSAMDQLIFTDEAAIAGAPVPFLTINSVAPTIMAYGTDEQKRFFLPRIAA
CCCHHHCCCCHHHHHHHHCCCCHHHCCCCCCEEEECCCCCEEEEECCCCCCEEECCEEEC
GDLHFSIGYSEPGAGTDLANLRTTAVRDGDDYVVNGQKMWTSLIQYADYVWLAVRTNPES
CCEEEEECCCCCCCCCCHHHHHEEEEECCCCEEECCHHHHHHHHHHCCEEEEEEEECCCC
SGAKKHRGISVLIVPTTAEGFSWTPVHTMAGPDTSATYYSDVRVPVANRVGEENAGWKLV
CCCHHHCCEEEEEEEECCCCCCCCCEEECCCCCCCCEEEECEECCHHHHCCCCCCCEEEE
TNQLNHERVALVSPAPIFGCLREVREWAQNTKDAGGTRLIDSEWVQLNLARVHAKAEVLK
ECCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEECCHHHEEHHHHHHHHHHHHH
LINWELASSQSGPKDAGPSPADASAAKVFGTELATEAYRLLMEVLGTAATLRQNSPGALL
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
RGRVERMHRACLILTFGGGTNEVQRDIIGMVALGLPRANR
HHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRISYTPQQEELRRELRSYFATLMTPERREALSSVQGEYGVGNVYRETIAQMGRDGWLAL
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEE
GWPKEYGGQGRSAMDQLIFTDEAAIAGAPVPFLTINSVAPTIMAYGTDEQKRFFLPRIAA
CCCHHHCCCCHHHHHHHHCCCCHHHCCCCCCEEEECCCCCEEEEECCCCCCEEECCEEEC
GDLHFSIGYSEPGAGTDLANLRTTAVRDGDDYVVNGQKMWTSLIQYADYVWLAVRTNPES
CCEEEEECCCCCCCCCCHHHHHEEEEECCCCEEECCHHHHHHHHHHCCEEEEEEEECCCC
SGAKKHRGISVLIVPTTAEGFSWTPVHTMAGPDTSATYYSDVRVPVANRVGEENAGWKLV
CCCHHHCCEEEEEEEECCCCCCCCCEEECCCCCCCCEEEECEECCHHHHCCCCCCCEEEE
TNQLNHERVALVSPAPIFGCLREVREWAQNTKDAGGTRLIDSEWVQLNLARVHAKAEVLK
ECCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEECCHHHEEHHHHHHHHHHHHH
LINWELASSQSGPKDAGPSPADASAAKVFGTELATEAYRLLMEVLGTAATLRQNSPGALL
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
RGRVERMHRACLILTFGGGTNEVQRDIIGMVALGLPRANR
HHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]