Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639410
Identifier: 121639410
GI number: 121639410
Start: 3889387
End: 3889965
Strand: Direct
Name: 121639410
Synonym: BCG_3555
Alternate gene names: NA
Gene position: 3889387-3889965 (Clockwise)
Preceding gene: 121639409
Following gene: 121639423
Centisome position: 88.91
GC content: 62.35
Gene sequence:
>579_bases GTGAACATCCGTTGCGGACTGGCCGCTGGGGCCGTCATCTGCTCGGCCGTCGCACTGGGAATTGCGCTGCACTCCGGTGA CCCGGCGCGTGCGCTCGGACCGCCGCCGGATGGCAGTTACTCCTTCAACCAGGCCGGAGTGTCCGGGGTGACGTGGACGA TTACCGCGCTGTGCGATCAGCCGTCGGGAACCCGTAACATGAACGACTATTCTGACCCCATCGTTTGGGCGTTCAACTGC GCTCTCAACGTGGTGAGTACGACGCCCCAACAGATCACCCGTACGGACCGGCTGCAGAACTTCAGCGGCAGGGCTCGGAT GAGTAGCATGCTGTGGACCTTCCAGGTGAATCAGGCAGACGGCGTGGCGTGTCCGGACGGCAGCACGGCACCGTCCAGCG AAACCTATGCGTTCAGCGACGAGACGCTGACCGGGACGCACACCACCGTGCATGGCGCCGTGTGTGGCCTGCAGCCAAAG TTGAGCAAACAACCGTTTTCACTGCAGCTCATCGGCCCGCCACCCAGCCCGGTCCAGCGTTATCCGTTGTACTGCAACAA CATTGCGATGTGCTATTAA
Upstream 100 bases:
>100_bases CGAAATTGGGCGATTCTGCGTCTGCTCGCGCCCTGGAAGCTGGTGCGGCTGCCCAAAGGCTGTGATACTCGATGGAGCGC GAAGGCCCGAAGGAGGGCAT
Downstream 100 bases:
>100_bases ATCGGCGTGATGTAGGCGATCAGCCATTTGCCGTCAATCCGCTGGAAATCCACCCGCAGTCGGCTGCCGTCGTAGAGCGG CTGTCGCGTCTTGTCGGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MNIRCGLAAGAVICSAVALGIALHSGDPARALGPPPDGSYSFNQAGVSGVTWTITALCDQPSGTRNMNDYSDPIVWAFNC ALNVVSTTPQQITRTDRLQNFSGRARMSSMLWTFQVNQADGVACPDGSTAPSSETYAFSDETLTGTHTTVHGAVCGLQPK LSKQPFSLQLIGPPPSPVQRYPLYCNNIAMCY
Sequences:
>Translated_192_residues MNIRCGLAAGAVICSAVALGIALHSGDPARALGPPPDGSYSFNQAGVSGVTWTITALCDQPSGTRNMNDYSDPIVWAFNC ALNVVSTTPQQITRTDRLQNFSGRARMSSMLWTFQVNQADGVACPDGSTAPSSETYAFSDETLTGTHTTVHGAVCGLQPK LSKQPFSLQLIGPPPSPVQRYPLYCNNIAMCY >Mature_192_residues MNIRCGLAAGAVICSAVALGIALHSGDPARALGPPPDGSYSFNQAGVSGVTWTITALCDQPSGTRNMNDYSDPIVWAFNC ALNVVSTTPQQITRTDRLQNFSGRARMSSMLWTFQVNQADGVACPDGSTAPSSETYAFSDETLTGTHTTVHGAVCGLQPK LSKQPFSLQLIGPPPSPVQRYPLYCNNIAMCY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20363; Mature: 20363
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIRCGLAAGAVICSAVALGIALHSGDPARALGPPPDGSYSFNQAGVSGVTWTITALCDQ CCEECCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECC PSGTRNMNDYSDPIVWAFNCALNVVSTTPQQITRTDRLQNFSGRARMSSMLWTFQVNQAD CCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHCCCCHHHHEEEEEEEEECCCC GVACPDGSTAPSSETYAFSDETLTGTHTTVHGAVCGLQPKLSKQPFSLQLIGPPPSPVQR CEECCCCCCCCCCCEEEECCCEECCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCC YPLYCNNIAMCY CCEEECCEEEEC >Mature Secondary Structure MNIRCGLAAGAVICSAVALGIALHSGDPARALGPPPDGSYSFNQAGVSGVTWTITALCDQ CCEECCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECC PSGTRNMNDYSDPIVWAFNCALNVVSTTPQQITRTDRLQNFSGRARMSSMLWTFQVNQAD CCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHCCCCHHHHEEEEEEEEECCCC GVACPDGSTAPSSETYAFSDETLTGTHTTVHGAVCGLQPKLSKQPFSLQLIGPPPSPVQR CEECCCCCCCCCCCEEEECCCEECCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCC YPLYCNNIAMCY CCEEECCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA