Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639405
Identifier: 121639405
GI number: 121639405
Start: 3885269
End: 3885718
Strand: Direct
Name: 121639405
Synonym: BCG_3550
Alternate gene names: NA
Gene position: 3885269-3885718 (Clockwise)
Preceding gene: 121639403
Following gene: 121639407
Centisome position: 88.82
GC content: 64.44
Gene sequence:
>450_bases TTGCACGCCGAGGGCCCCCCTTCCGTCATTTGTATACGGCTGTTGGTGGGGTTGGTGTTTCTCAGTGAGGGAATCCAGAA ATTCATGTATCCAGATCAGCTGGGTCCGGGCCGCTTCGAGCGGATCGGCATCCCCGCCGCCACGTTCTTCGCCGATCTGG ACGGGGTGGTCGAGATTGTCTGCGGCACACTGGTCCTCCTCGGCCTGCTGACCCGGGTCGCGGCGGTGCCGTTGCTCATC GACATGGTGGGAGCGATCGTGCTGACCAAACTCCGAGCACTGCAGCCGGGCGGGTTTCTCGGGGTAGAGGGCTTCTGGGG CATGGCCCACGCTGCCCGGACCGACCTGTCGATGCTGCTCGGATTGATCTTCCTGCTGTGGTCCGGCCCCGGCCGGTGGT CACTAGATAGGCGACTGTCCAAACGCGCCACGGCTTGCGGCGCGAGGTGA
Upstream 100 bases:
>100_bases TGCGCGTCCACGGTAGGCTTCAACCACGAATTATCGGGCAACGATATCGGAGTCGGAGTTGGCAATAACTGGTTCGGCCG CACCGTCATGGCCGCGACTA
Downstream 100 bases:
>100_bases ACCCGCGACGTAGCGCGACCGATGCACCGGACTCAACGACGAGTCAGCGGTGGCGTCGCGAATGAACTGCCCGATCTGAC GCAACGAACGGGTCGCTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MHAEGPPSVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLLGLLTRVAAVPLLI DMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLLWSGPGRWSLDRRLSKRATACGAR
Sequences:
>Translated_149_residues MHAEGPPSVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLLGLLTRVAAVPLLI DMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLLWSGPGRWSLDRRLSKRATACGAR >Mature_149_residues MHAEGPPSVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLLGLLTRVAAVPLLI DMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLLWSGPGRWSLDRRLSKRATACGAR
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16002; Mature: 16002
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAEGPPSVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIV CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHH CGTLVLLGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH GLIFLLWSGPGRWSLDRRLSKRATACGAR HHHHHHHCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MHAEGPPSVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIV CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHH CGTLVLLGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH GLIFLLWSGPGRWSLDRRLSKRATACGAR HHHHHHHCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA