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The map label for this gene is 121639332

Identifier: 121639332

GI number: 121639332

Start: 3812754

End: 3813053

Strand: Direct

Name: 121639332

Synonym: BCG_3477

Alternate gene names: NA

Gene position: 3812754-3813053 (Clockwise)

Preceding gene: 121639331

Following gene: 121639333

Centisome position: 87.16

GC content: 61.0

Gene sequence:

>300_bases
ATGCGTGCTACCGTTGGGCTTGTGGAGGCAATCGGAATCCGAGAACTAAGACAGCACGCATCGCGATACCTCGCCCGGGT
TGAAGCCGGCGAGGAACTTGGCGTCACCAACAAAGGAAGACTTGTGGCCCGACTCATCCCGGTGCAGGCCGCGGAGCGTT
CTCGCGAAGCCCTGATTGAATCAGGTGTCCTGATTCCGGCTCGTCGTCCACAAAACCTTCTCGACGTCACCGCCGAACCG
GCGCGCGGCCGCAAGCGCACCCTGTCCGATGTTCTCAACGAAATGCGCGACGAGCAGTGA

Upstream 100 bases:

>100_bases
CCCGTCGACGTGTACGGGCAGGCTAGCCGGGTGATCAGCGGGGCGCCGATGGAGATCGCTGGCTGATCAACCAGTAAGCG
CAACGCAATTATGTAGCACC

Downstream 100 bases:

>100_bases
TCTATATGGACACCTCGGCCCTGACTAAGCTGCTCATCTCCGAGCCCGAGACGACCGAACTGCGGACATGGCTGACCGCG
CAAAGCGGCCAGGGCGAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MRATVGLVEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGVLIPARRPQNLLDVTAEP
ARGRKRTLSDVLNEMRDEQ

Sequences:

>Translated_99_residues
MRATVGLVEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGVLIPARRPQNLLDVTAEP
ARGRKRTLSDVLNEMRDEQ
>Mature_99_residues
MRATVGLVEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGVLIPARRPQNLLDVTAEP
ARGRKRTLSDVLNEMRDEQ

Specific function: Unknown

COG id: COG4118

COG function: function code D; Antitoxin of toxin-antitoxin stability system

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3407_MYCTU (P65077)

Other databases:

- EMBL:   BX842583
- EMBL:   AE000516
- PIR:   D70736
- RefSeq:   NP_217924.1
- RefSeq:   NP_338039.1
- EnsemblBacteria:   EBMYCT00000003484
- EnsemblBacteria:   EBMYCT00000070771
- GeneID:   887505
- GeneID:   922931
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT3515
- KEGG:   mtu:Rv3407
- TIGR:   MT3515
- TubercuList:   Rv3407
- GeneTree:   EBGT00050000018704
- HOGENOM:   HBG128072
- OMA:   CGVERIG
- ProtClustDB:   CLSK792475
- InterPro:   IPR006442
- TIGRFAMs:   TIGR01552

Pfam domain/function: PF02604 PhdYeFM

EC number: NA

Molecular weight: Translated: 11010; Mature: 11010

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRATVGLVEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
SGVLIPARRPQNLLDVTAEPARGRKRTLSDVLNEMRDEQ
CCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRATVGLVEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
SGVLIPARRPQNLLDVTAEPARGRKRTLSDVLNEMRDEQ
CCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036