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The map label for this gene is ynjA [H]

Identifier: 121639255

GI number: 121639255

Start: 3703047

End: 3704759

Strand: Direct

Name: ynjA [H]

Synonym: BCG_3397

Alternate gene names: 121639255

Gene position: 3703047-3704759 (Clockwise)

Preceding gene: 121639253

Following gene: 121639257

Centisome position: 84.65

GC content: 66.14

Gene sequence:

>1713_bases
ATGGTTGTTGTTGGAACCGATGCGCACAAGTACAGCCACACCTTTGTGGCCACCGACGAAGTGGGTCGCCAACTCGGTGA
GAAGACCGTCAAGGCCACCACGGCCGGGCACGCCACAGCCATCATGTGGGCCCGTGAACAGTTCGGCCTCGAGCTGATCT
GGGGCATCGAGGACTGCCGCAACATGTCGGCGCGTCTGGAGCGTGACCTACTGGCGGCCGGCCAGCAGGTGGTGCGGGTA
CCCACCAAGCTGATGGCCCAGACCCGCAAGTCGGCGCGCAGTCGGGGCAAGTCGGATCCGATCGATGCGCTGGCGGTGGC
GCGGGCGGTGCTGCGTGAAACCGACCTACCCCTGGCCACCCACGACGAGACGTCGCGGGAGTTGAAGTTGTTGACTGACC
GTCGAGATGTCCTTGTGGCCCAACGCACGTCGGCGATCAACCGGTTGCGCTGGCTCGTCCATGAACTCGATCCCGAGCGG
GCACCGGCAGCACGCTCGCTCGATGCCGCCAAGCACCAGCAGGCCCTGCGGACCTGGCTGGACACCCAGCCAGGATTGGT
CGCCGAACTCGCGCGCGCCGAGCTGACCGACATCATCCGGCTCACCGGCGAGATCAACACCCTGGCCCAGCGCATCAGCG
CCCGAGTCCACCAGGTCGCCCCCGCACTGCTGGAAATCCCTGGCTGCGCGGAGCTGACTGCAGCCAAAATCGTCGGCGAA
GCCGCCGGAGTGACCCGGTTCAAAAGCGAAGCCGCCTTCGCCTGCCATGCCGCAGTGGCTCCCATCCCGGTGTGGTCGGG
CAACACCGCCGGCCAGATGCGGCTCAGCCGCTCGGGCAACCGCCAGCTCAACGCCGCCCTACACCGCATCGCACTGACCC
AAATCCGGATGACCGACAGCCGGGGCCAGGCCTACTACCAAAGGCTGCAAGACGCCGGGAAAACCAAACGCGCAGCACTA
CGCTGCCTCAAACGCCGCCTAGCCCGCACCGTCTTCCAGGCCCTGCGCACCGTCCATCAGCCCAGCTCCGAACACACCCA
ACCCGCGGCCGCTTGCCATAGGAGCTATTGCTCGTCACACCTCGGCGAGCCACCTCGTCTAACGGATATGACACAGAAAA
CCCGCATCCAGCCCCTACCTCCCAAGCGAGCCGGCCTGTTGATCCGCGCACTGTATCGGATCGCCAAGCGGCGCTTCGGC
GAAGTTCCCGAGCCGTTCACGGTCACCGCACATCATCGGCGGCTGCTGATCGCCAATGTGGTGCACGAAGCCCTGCTGCA
GCGAGCGTCGCGGAAGCTACCGCCCAGCGTCCGTGAGCTGGCGGTGTTTTGGACCGCCCGCAGCATCGGCTGCTCGTGGT
GCGTGGACTTCGGAGCCATGCTGCAGCGCCTGGACGGGCTGGACGTGGACAGGCTCACGGACATCGACAATTACGCCACC
TCATCGAAATTCAGCGACGACGAACGCGCCGCCATCGCCTACGCCGAGGCGATGACCGCAGACCCGCATTCGGTGACCGA
CGAGCAGGTGGCCGACCTGCGGGCCCGCTTCGGCGAGGCCGGCGTGATCGAGCTGACTTACCAGATCGGCGTGGAGAACA
TGCGAGCCCGGATGAATTCGGCGCTGGGCATCACCGAGCAAGGCTTCAATTCCGGTGATGCCTGCCGCGTCCCGTGGGCT
GCGCCCGACGTTCCTTCAGCGGAGAGCCGGTGA

Upstream 100 bases:

>100_bases
GCCGGCGTGACTTGATAGGAGCGTGGCTTTCGCCCCGACTGAGATGTGTCCGCCGACCGGCCCAACCTCAACACCCCCTC
AAGTGAAGGAGGCAACCACC

Downstream 100 bases:

>100_bases
ACTTGTCGGGATTGGCGATATCCCACAGCGCGCACACCTTTCCGTCGCGCACGGTTATCGCGGTGATCCGCGGCGCCATC
GCCCGATACCCGTCGACCCC

Product: putative transposase fusion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 570; Mature: 570

Protein sequence:

>570_residues
MVVVGTDAHKYSHTFVATDEVGRQLGEKTVKATTAGHATAIMWAREQFGLELIWGIEDCRNMSARLERDLLAAGQQVVRV
PTKLMAQTRKSARSRGKSDPIDALAVARAVLRETDLPLATHDETSRELKLLTDRRDVLVAQRTSAINRLRWLVHELDPER
APAARSLDAAKHQQALRTWLDTQPGLVAELARAELTDIIRLTGEINTLAQRISARVHQVAPALLEIPGCAELTAAKIVGE
AAGVTRFKSEAAFACHAAVAPIPVWSGNTAGQMRLSRSGNRQLNAALHRIALTQIRMTDSRGQAYYQRLQDAGKTKRAAL
RCLKRRLARTVFQALRTVHQPSSEHTQPAAACHRSYCSSHLGEPPRLTDMTQKTRIQPLPPKRAGLLIRALYRIAKRRFG
EVPEPFTVTAHHRRLLIANVVHEALLQRASRKLPPSVRELAVFWTARSIGCSWCVDFGAMLQRLDGLDVDRLTDIDNYAT
SSKFSDDERAAIAYAEAMTADPHSVTDEQVADLRARFGEAGVIELTYQIGVENMRARMNSALGITEQGFNSGDACRVPWA
APDVPSAESR

Sequences:

>Translated_570_residues
MVVVGTDAHKYSHTFVATDEVGRQLGEKTVKATTAGHATAIMWAREQFGLELIWGIEDCRNMSARLERDLLAAGQQVVRV
PTKLMAQTRKSARSRGKSDPIDALAVARAVLRETDLPLATHDETSRELKLLTDRRDVLVAQRTSAINRLRWLVHELDPER
APAARSLDAAKHQQALRTWLDTQPGLVAELARAELTDIIRLTGEINTLAQRISARVHQVAPALLEIPGCAELTAAKIVGE
AAGVTRFKSEAAFACHAAVAPIPVWSGNTAGQMRLSRSGNRQLNAALHRIALTQIRMTDSRGQAYYQRLQDAGKTKRAAL
RCLKRRLARTVFQALRTVHQPSSEHTQPAAACHRSYCSSHLGEPPRLTDMTQKTRIQPLPPKRAGLLIRALYRIAKRRFG
EVPEPFTVTAHHRRLLIANVVHEALLQRASRKLPPSVRELAVFWTARSIGCSWCVDFGAMLQRLDGLDVDRLTDIDNYAT
SSKFSDDERAAIAYAEAMTADPHSVTDEQVADLRARFGEAGVIELTYQIGVENMRARMNSALGITEQGFNSGDACRVPWA
APDVPSAESR
>Mature_570_residues
MVVVGTDAHKYSHTFVATDEVGRQLGEKTVKATTAGHATAIMWAREQFGLELIWGIEDCRNMSARLERDLLAAGQQVVRV
PTKLMAQTRKSARSRGKSDPIDALAVARAVLRETDLPLATHDETSRELKLLTDRRDVLVAQRTSAINRLRWLVHELDPER
APAARSLDAAKHQQALRTWLDTQPGLVAELARAELTDIIRLTGEINTLAQRISARVHQVAPALLEIPGCAELTAAKIVGE
AAGVTRFKSEAAFACHAAVAPIPVWSGNTAGQMRLSRSGNRQLNAALHRIALTQIRMTDSRGQAYYQRLQDAGKTKRAAL
RCLKRRLARTVFQALRTVHQPSSEHTQPAAACHRSYCSSHLGEPPRLTDMTQKTRIQPLPPKRAGLLIRALYRIAKRRFG
EVPEPFTVTAHHRRLLIANVVHEALLQRASRKLPPSVRELAVFWTARSIGCSWCVDFGAMLQRLDGLDVDRLTDIDNYAT
SSKFSDDERAAIAYAEAMTADPHSVTDEQVADLRARFGEAGVIELTYQIGVENMRARMNSALGITEQGFNSGDACRVPWA
APDVPSAESR

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2313c [H]

Homologues:

Organism=Escherichia coli, GI1788050, Length=181, Percent_Identity=32.5966850828729, Blast_Score=86, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 62962; Mature: 62962

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVVGTDAHKYSHTFVATDEVGRQLGEKTVKATTAGHATAIMWAREQFGLELIWGIEDCR
CEEECCCCCHHCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHEEHHHHCCCEEEECHHHHH
NMSARLERDLLAAGQQVVRVPTKLMAQTRKSARSRGKSDPIDALAVARAVLRETDLPLAT
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
HDETSRELKLLTDRRDVLVAQRTSAINRLRWLVHELDPERAPAARSLDAAKHQQALRTWL
CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
DTQPGLVAELARAELTDIIRLTGEINTLAQRISARVHQVAPALLEIPGCAELTAAKIVGE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AAGVTRFKSEAAFACHAAVAPIPVWSGNTAGQMRLSRSGNRQLNAALHRIALTQIRMTDS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHEECCC
RGQAYYQRLQDAGKTKRAALRCLKRRLARTVFQALRTVHQPSSEHTQPAAACHRSYCSSH
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LGEPPRLTDMTQKTRIQPLPPKRAGLLIRALYRIAKRRFGEVPEPFTVTAHHRRLLIANV
CCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHH
VHEALLQRASRKLPPSVRELAVFWTARSIGCSWCVDFGAMLQRLDGLDVDRLTDIDNYAT
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHCCCHHHHC
SSKFSDDERAAIAYAEAMTADPHSVTDEQVADLRARFGEAGVIELTYQIGVENMRARMNS
CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHCHHHHHHHHHH
ALGITEQGFNSGDACRVPWAAPDVPSAESR
HCCCCCCCCCCCCCEECCCCCCCCCCCCCC
>Mature Secondary Structure
MVVVGTDAHKYSHTFVATDEVGRQLGEKTVKATTAGHATAIMWAREQFGLELIWGIEDCR
CEEECCCCCHHCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHEEHHHHCCCEEEECHHHHH
NMSARLERDLLAAGQQVVRVPTKLMAQTRKSARSRGKSDPIDALAVARAVLRETDLPLAT
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
HDETSRELKLLTDRRDVLVAQRTSAINRLRWLVHELDPERAPAARSLDAAKHQQALRTWL
CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
DTQPGLVAELARAELTDIIRLTGEINTLAQRISARVHQVAPALLEIPGCAELTAAKIVGE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AAGVTRFKSEAAFACHAAVAPIPVWSGNTAGQMRLSRSGNRQLNAALHRIALTQIRMTDS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHEECCC
RGQAYYQRLQDAGKTKRAALRCLKRRLARTVFQALRTVHQPSSEHTQPAAACHRSYCSSH
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LGEPPRLTDMTQKTRIQPLPPKRAGLLIRALYRIAKRRFGEVPEPFTVTAHHRRLLIANV
CCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHH
VHEALLQRASRKLPPSVRELAVFWTARSIGCSWCVDFGAMLQRLDGLDVDRLTDIDNYAT
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHCCCHHHHC
SSKFSDDERAAIAYAEAMTADPHSVTDEQVADLRARFGEAGVIELTYQIGVENMRARMNS
CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHCHHHHHHHHHH
ALGITEQGFNSGDACRVPWAAPDVPSAESR
HCCCCCCCCCCCCCEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]