Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121639252
Identifier: 121639252
GI number: 121639252
Start: 3700734
End: 3701120
Strand: Direct
Name: 121639252
Synonym: BCG_3394
Alternate gene names: NA
Gene position: 3700734-3701120 (Clockwise)
Preceding gene: 121639251
Following gene: 121639253
Centisome position: 84.6
GC content: 60.72
Gene sequence:
>387_bases GTGACCCGAATTCCCGACAGTGATGTCGAGAAGCCAGGTAGCTCCGGTTCGGTGTCGAGCACCGGGCCGGAGGTCGCCGC ACGGCGTCATGGTAGGCGTTGCGGGTGCGACCGCAATCGGTCACCGCCACGTTCCAAATCGGTCACACTTGACACCCGTC ATGTCGGCGGAGCCGGTATTCTTCGAATTCGAGCTTTCCCCATCAGGCCCTGGCGCCCGGTGAATCGCTCATCAAACGGA CCCGCGACCGACGAGGATTGTGATGGCCCGAAACGAACTCCGGTTCGGTATTCTCGGACCGCTAGAGATAAGCGCAGGTT TCCGCAGTCTACCGTTGGGCACACCGAAGCAACGTGCGGTCTTGGCGACGCTGATCATTCATCGTAA
Upstream 100 bases:
>100_bases GCCTCAATGGAATCTCAATGCGCACGGCGCACGACCGGATTCGGCGGCGCATGTGGGTCCGGCAAGGCAACGGCCACCCG TTGGCCGTTCATCCACGACG
Downstream 100 bases:
>100_bases TCGCCCGGTTGGGATCGACTCGTTGATCGACGCGGCTTGGGAGCAGGACCGGCCGGAGGGATCACGAGCGACCGTGTATA CGTATGTCTCGAATTTGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MTRIPDSDVEKPGSSGSVSSTGPEVAARRHGRRCGCDRNRSPPRSKSVTLDTRHVGGAGILRIRAFPIRPWRPVNRSSNG PATDEDCDGPKRTPVRYSRTARDKRRFPQSTVGHTEATCGLGDADHSS
Sequences:
>Translated_128_residues MTRIPDSDVEKPGSSGSVSSTGPEVAARRHGRRCGCDRNRSPPRSKSVTLDTRHVGGAGILRIRAFPIRPWRPVNRSSNG PATDEDCDGPKRTPVRYSRTARDKRRFPQSTVGHTEATCGLGDADHSS >Mature_127_residues TRIPDSDVEKPGSSGSVSSTGPEVAARRHGRRCGCDRNRSPPRSKSVTLDTRHVGGAGILRIRAFPIRPWRPVNRSSNGP ATDEDCDGPKRTPVRYSRTARDKRRFPQSTVGHTEATCGLGDADHSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13907; Mature: 13775
Theoretical pI: Translated: 11.26; Mature: 11.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIPDSDVEKPGSSGSVSSTGPEVAARRHGRRCGCDRNRSPPRSKSVTLDTRHVGGAGI CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCEE LRIRAFPIRPWRPVNRSSNGPATDEDCDGPKRTPVRYSRTARDKRRFPQSTVGHTEATCG EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC LGDADHSS CCCCCCCC >Mature Secondary Structure TRIPDSDVEKPGSSGSVSSTGPEVAARRHGRRCGCDRNRSPPRSKSVTLDTRHVGGAGI CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCEE LRIRAFPIRPWRPVNRSSNGPATDEDCDGPKRTPVRYSRTARDKRRFPQSTVGHTEATCG EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC LGDADHSS CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA