Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639166
Identifier: 121639166
GI number: 121639166
Start: 3612349
End: 3613167
Strand: Direct
Name: 121639166
Synonym: BCG_3306
Alternate gene names: NA
Gene position: 3612349-3613167 (Clockwise)
Preceding gene: 121639162
Following gene: 121639169
Centisome position: 82.58
GC content: 61.66
Gene sequence:
>819_bases ATGAACGAGGTGACCGCCGGGGTGCGTGAGCTCGCCACGGCCATCATGGTGTCACGGCATCTGACCGGCGTACTTGCCGG CCACGGCAGCCAAACCGTTACGTATCATTTTGCGTCGATTTTGTGTTCGTCCGTACACTCACTTGTTGTGTCCTTTGCCG ATGCCACCATCGCGCGCCTTCCCGGGGTGGTCCAGCCCTATGCGCAGCGCCACCATGAGCTGATCAAATTTGCCATCGTC GGCGGCACCACATTCATCATCGACACAGCAATTTTCTACACCCTCAAGCTGACGGTTCTCGAACCCAAGCCGGTGACCGC GAAGGTGATCGCCGGCATCGTCGCCGTCATCGCGTCCTACGTGTTGAACAGGGAGTGGAGCTTCCGCGACCGCGGCGGTC GCGAGCGCCACCATGAGGCGCTGCTGTTCTTTGCGTTCAGCGGCGTGGGAGTGCTGCTGAGCATGGCGCCGTTGTGGTTT TCCAGCTACATCCTGCAGCTACGGGTGCCAACGGTGTCACTGACCATGGAAAACATCGCCGACTTCATCTCGGCCTACAT TATTGGCAACTTGCTGCAAATGGCGTTCCGCTTCTGGGCGTTTCGGCGCTGGGTGTTCCCCGACGAGTTCGCCCGCAACC CCGACAAGGCCCTGGAATCCGCCCTTACCGCGGGCGGCATCGCCGAAGTCTTCGAGGACGTCTTGGAGGGCGGCTTCGAG GACGGCAACGTCACCCTGCTGCGGGCCTGGCGTAACCGGGCCAACCGGTTCGCTCAGCTGGGCGACTCGTCGGAGCCCAG GGTGTCGAAAACCTTGTGA
Upstream 100 bases:
>100_bases CGAGGTGACCAATACACGGAGGTTCTGCCCCAGCGCGATGGCAGCCTGATGGGTCATCCGGGCCAGCTGACCGCCACCGA CCATCGCAACGAGGGGGGCA
Downstream 100 bases:
>100_bases TACAGCAACGCATGCACCTCCCGCAGGCGCGGAATGTTGTAGAACTCGAGCGGATCTTGTGACGCGGACTCGATAATCAA CGTCCCGGTGCGAAAAATCC
Product: putative transmembrane protein
Products: NA
Alternate protein names: Transmembrane Protein; GtrA-Like Protein; Conserved Membrane Protein; Gtra-Like Protein
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MNEVTAGVRELATAIMVSRHLTGVLAGHGSQTVTYHFASILCSSVHSLVVSFADATIARLPGVVQPYAQRHHELIKFAIV GGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWF SSYILQLRVPTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAEVFEDVLEGGFE DGNVTLLRAWRNRANRFAQLGDSSEPRVSKTL
Sequences:
>Translated_272_residues MNEVTAGVRELATAIMVSRHLTGVLAGHGSQTVTYHFASILCSSVHSLVVSFADATIARLPGVVQPYAQRHHELIKFAIV GGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWF SSYILQLRVPTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAEVFEDVLEGGFE DGNVTLLRAWRNRANRFAQLGDSSEPRVSKTL >Mature_272_residues MNEVTAGVRELATAIMVSRHLTGVLAGHGSQTVTYHFASILCSSVHSLVVSFADATIARLPGVVQPYAQRHHELIKFAIV GGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWF SSYILQLRVPTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAEVFEDVLEGGFE DGNVTLLRAWRNRANRFAQLGDSSEPRVSKTL
Specific function: Unknown
COG id: COG2246
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30105; Mature: 30105
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEVTAGVRELATAIMVSRHLTGVLAGHGSQTVTYHFASILCSSVHSLVVSFADATIARL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIASY CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHH VLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTMENIA HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH DFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAEVFEDVLEGGFE HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCC DGNVTLLRAWRNRANRFAQLGDSSEPRVSKTL CCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MNEVTAGVRELATAIMVSRHLTGVLAGHGSQTVTYHFASILCSSVHSLVVSFADATIARL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIASY CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHH VLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTMENIA HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH DFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAEVFEDVLEGGFE HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCC DGNVTLLRAWRNRANRFAQLGDSSEPRVSKTL CCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA