Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is yvdB [H]
Identifier: 121639162
GI number: 121639162
Start: 3607108
End: 3609402
Strand: Direct
Name: yvdB [H]
Synonym: BCG_3302
Alternate gene names: 121639162
Gene position: 3607108-3609402 (Clockwise)
Preceding gene: 121639161
Following gene: 121639166
Centisome position: 82.46
GC content: 64.18
Gene sequence:
>2295_bases GTGACCATTCCGAGGAGTCAACACATGAGCACCGCAGTCAACAGCTGCACCGAGGCGCCCGCATCGCGATCACAGTGGAT GCTGGCTAATCTGCGGCACGATGTTCCCGCATCACTTGTCGTCTTCCTTGTTGCGTTGCCACTTTCGCTGGGGATCGCGA TCGCCTCCGGGGCCCCGATAATCGCCGGTGTGATCGCCGCCGTCGTAGGCGGCATTGTCGCCGGGGCGGTCGGTGGGTCG CCGGTTCAGGTCAGCGGCCCGGCCGCGGGTCTGACCGTGGTGGTCGCCGAGCTGATCGATGAGCTCGGTTGGCCGATGCT GTGTCTGATGACGATCGCCGCGGGTGCACTGCAGATCGTGTTCGGCCTAAGTCGGATGGCGCGCGCCGCGCTGGCCATCG CCCCGGTCGTGGTGCACGCCATGCTGGCCGGCATCGGTATCACCATCGCGCTGCAGCAAATTCATGTTCTGCTCGGTGGT ACGTCGCACAGCTCGGCGTGGCGGAACATCGTAGCGTTGCCGGACGGCATCCTCCATCACGAACTGCACGAAGTGATCGT CGGCGGGACGGTTATCGCGATCCTGTTGATGTGGTCAAAGCTGCCCGCCAAGGTGCGTATCATTCCCGGCCCACTGGTAG CCATCGCGGGCGCGACCGTGCTTGCGTTGCTACCCGTGCTACAAACCGAACGAATCGACCTGCAGGGCAACTTCTTTGAC GCGATTGGCTTGCCCAAACTTGCCGAAATGTCCCCGGGAGGACAGCCGTGGTCTCATGAGATCAGCGCCATCGCGCTCGG TGTCCTCACCATTGCGCTGATCGCAAGCGTCGAATCGCTGCTGTCGGCGGTCGGTGTCGACAAGCTGCATCACGGCCCGC GCACCGACTTCAACCGGGAGATGGTCGGGCAGGGCAGCGCGAACGTGGTGTCCGGATTGCTCGGCGGGCTGCCCATCACC GGTGTCATCGTGCGCAGCTCGGCCAACGTGGCCGCCGGCGCCCGAACCCGGATGTCGACGATCCTGCACGGAGTGTGGAT CCTGCTGTTTGCGTCACTGTTCACCAACCTGGTGGAACTGATTCCCAAGGCGGCGCTGGCCGGCCTGCTCATCGTGATCG GTGCCCAGCTGGTCAAGCTGGCGCACATCAAACTAGCTTGGCGCACAGGAAATTTCGTAATCTACGCCATCACCATCGTG TGTGTGGTGTTCCTCAATCTGCTGGAAGGCGTGGCCATCGGGCTGGTCGTGGCGATCGTATTCCTGTTGGTGCGGGTGGT ACGCGCGCCCGTCGAGGTCAAGCCGGTCGGCGGCGAGCAGTCCAAGCGATGGCGGGTCGATATCGACGGCACGTTGAGCT TCCTGCTGCTGCCCCGCCTGACCACGGTGCTCTCGAAGCTGCCGGAAGGGTCGGAGGTGACGTTAAACCTGAACGCAGAC TACATCGACGACTCCGTTTCCGAGGCCATCTCCGATTGGCGGCGCGCCCACGAGACGAGGGGCGGAGTGGTAGCGATCGT GGAAACGTCGCCGGCCAAACTGCACCACGCACACGCCCGACCACCGAAGCGCCACTTCGCGTCTGATCCGATTGGACTGG TTCCGTGGCGATCAGCGCGCGGCAAAGACCGCGGCAGCGCTTCGGTTCTCGACCGCATCGACGAGTATCACCGCAATGGC GCGGCCGTGCTGCACCCGCATATCGCCGGGCTGACCGATTCACAGGACCCGTATGAGCTGTTCCTCACCTGTGCCGACTC GCGGATTCTGCCGAACGTCATCACCGCCAGCGGCCCCGGCGACCTGTACACCGTCCGCAACCTCGGCAACCTGGTGCCGA CCGATCCGGACGACCGATCGGTTGACGCGGCACTCGACTTCGCCGTCAACCAGCTCGGCGTCAGCTCGGTTGTCGTCTGC GGACATTCGTCGTGTGCTGCGATGACGGCGCTCCTGGAAGACGACCCGGCCAACACGACGACTCCCATGATGCGTTGGCT CGAGAATGCCCACGACAGCCTGGTGGTGTTCCGCAATCACCACCCGGCACGCCGCAGCGCCGAATCCGCCGGTTACCCCG AAGCCGACCAGCTGAGCATCGTAAACGTTGCCGTTCAGGTGGAAAGGCTGACCCGCCACCCGATCTTGGCGACCGCGGTC GCCGCTGCTGATCTACAGGTCATCGGCATATTCTTCGACATCTCGACCGCCCGGGTATACGAGGTGGGTCCGAACGGCAT CATCTGCCCGGACGAGCCGGCCGACCGCCCCGTCGACCACGAATCAGCGCAGTAG
Upstream 100 bases:
>100_bases CGCACACCGGCGCGCTACGCCAGCTTCCGCGCGGTCGTCACCGATCCCCCGCCCACCGCCGGCGAACACAATGCCGTGTT TCTGGCCCGGCCCTGACGCT
Downstream 100 bases:
>100_bases CGCCCGCGACATCACTACCCGCTGAATCTGATTGGTGCCCTCATAGATCTGGGTGATCTTGGCGTCGCGCATAAACCGCT CGACCGGGAAGTCGGTGGTG
Product: putative transmembrane carbonic anhydrase
Products: CO2; H2O
Alternate protein names: NA
Number of amino acids: Translated: 764; Mature: 763
Protein sequence:
>764_residues MTIPRSQHMSTAVNSCTEAPASRSQWMLANLRHDVPASLVVFLVALPLSLGIAIASGAPIIAGVIAAVVGGIVAGAVGGS PVQVSGPAAGLTVVVAELIDELGWPMLCLMTIAAGALQIVFGLSRMARAALAIAPVVVHAMLAGIGITIALQQIHVLLGG TSHSSAWRNIVALPDGILHHELHEVIVGGTVIAILLMWSKLPAKVRIIPGPLVAIAGATVLALLPVLQTERIDLQGNFFD AIGLPKLAEMSPGGQPWSHEISAIALGVLTIALIASVESLLSAVGVDKLHHGPRTDFNREMVGQGSANVVSGLLGGLPIT GVIVRSSANVAAGARTRMSTILHGVWILLFASLFTNLVELIPKAALAGLLIVIGAQLVKLAHIKLAWRTGNFVIYAITIV CVVFLNLLEGVAIGLVVAIVFLLVRVVRAPVEVKPVGGEQSKRWRVDIDGTLSFLLLPRLTTVLSKLPEGSEVTLNLNAD YIDDSVSEAISDWRRAHETRGGVVAIVETSPAKLHHAHARPPKRHFASDPIGLVPWRSARGKDRGSASVLDRIDEYHRNG AAVLHPHIAGLTDSQDPYELFLTCADSRILPNVITASGPGDLYTVRNLGNLVPTDPDDRSVDAALDFAVNQLGVSSVVVC GHSSCAAMTALLEDDPANTTTPMMRWLENAHDSLVVFRNHHPARRSAESAGYPEADQLSIVNVAVQVERLTRHPILATAV AAADLQVIGIFFDISTARVYEVGPNGIICPDEPADRPVDHESAQ
Sequences:
>Translated_764_residues MTIPRSQHMSTAVNSCTEAPASRSQWMLANLRHDVPASLVVFLVALPLSLGIAIASGAPIIAGVIAAVVGGIVAGAVGGS PVQVSGPAAGLTVVVAELIDELGWPMLCLMTIAAGALQIVFGLSRMARAALAIAPVVVHAMLAGIGITIALQQIHVLLGG TSHSSAWRNIVALPDGILHHELHEVIVGGTVIAILLMWSKLPAKVRIIPGPLVAIAGATVLALLPVLQTERIDLQGNFFD AIGLPKLAEMSPGGQPWSHEISAIALGVLTIALIASVESLLSAVGVDKLHHGPRTDFNREMVGQGSANVVSGLLGGLPIT GVIVRSSANVAAGARTRMSTILHGVWILLFASLFTNLVELIPKAALAGLLIVIGAQLVKLAHIKLAWRTGNFVIYAITIV CVVFLNLLEGVAIGLVVAIVFLLVRVVRAPVEVKPVGGEQSKRWRVDIDGTLSFLLLPRLTTVLSKLPEGSEVTLNLNAD YIDDSVSEAISDWRRAHETRGGVVAIVETSPAKLHHAHARPPKRHFASDPIGLVPWRSARGKDRGSASVLDRIDEYHRNG AAVLHPHIAGLTDSQDPYELFLTCADSRILPNVITASGPGDLYTVRNLGNLVPTDPDDRSVDAALDFAVNQLGVSSVVVC GHSSCAAMTALLEDDPANTTTPMMRWLENAHDSLVVFRNHHPARRSAESAGYPEADQLSIVNVAVQVERLTRHPILATAV AAADLQVIGIFFDISTARVYEVGPNGIICPDEPADRPVDHESAQ >Mature_763_residues TIPRSQHMSTAVNSCTEAPASRSQWMLANLRHDVPASLVVFLVALPLSLGIAIASGAPIIAGVIAAVVGGIVAGAVGGSP VQVSGPAAGLTVVVAELIDELGWPMLCLMTIAAGALQIVFGLSRMARAALAIAPVVVHAMLAGIGITIALQQIHVLLGGT SHSSAWRNIVALPDGILHHELHEVIVGGTVIAILLMWSKLPAKVRIIPGPLVAIAGATVLALLPVLQTERIDLQGNFFDA IGLPKLAEMSPGGQPWSHEISAIALGVLTIALIASVESLLSAVGVDKLHHGPRTDFNREMVGQGSANVVSGLLGGLPITG VIVRSSANVAAGARTRMSTILHGVWILLFASLFTNLVELIPKAALAGLLIVIGAQLVKLAHIKLAWRTGNFVIYAITIVC VVFLNLLEGVAIGLVVAIVFLLVRVVRAPVEVKPVGGEQSKRWRVDIDGTLSFLLLPRLTTVLSKLPEGSEVTLNLNADY IDDSVSEAISDWRRAHETRGGVVAIVETSPAKLHHAHARPPKRHFASDPIGLVPWRSARGKDRGSASVLDRIDEYHRNGA AVLHPHIAGLTDSQDPYELFLTCADSRILPNVITASGPGDLYTVRNLGNLVPTDPDDRSVDAALDFAVNQLGVSSVVVCG HSSCAAMTALLEDDPANTTTPMMRWLENAHDSLVVFRNHHPARRSAESAGYPEADQLSIVNVAVQVERLTRHPILATAVA AADLQVIGIFFDISTARVYEVGPNGIICPDEPADRPVDHESAQ
Specific function: Possible Sulfate Transporter. [C]
COG id: COG0659
COG function: function code P; Sulfate permease and related transporters (MFS superfamily)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 STAS domain [H]
Homologues:
Organism=Homo sapiens, GI94721255, Length=433, Percent_Identity=22.8637413394919, Blast_Score=77, Evalue=6e-14, Organism=Homo sapiens, GI94721253, Length=433, Percent_Identity=22.8637413394919, Blast_Score=77, Evalue=6e-14, Organism=Homo sapiens, GI94721259, Length=433, Percent_Identity=22.8637413394919, Blast_Score=77, Evalue=6e-14, Organism=Homo sapiens, GI94721257, Length=238, Percent_Identity=27.7310924369748, Blast_Score=77, Evalue=8e-14, Organism=Homo sapiens, GI262206105, Length=478, Percent_Identity=23.0125523012552, Blast_Score=68, Evalue=3e-11, Organism=Homo sapiens, GI262206075, Length=478, Percent_Identity=23.0125523012552, Blast_Score=68, Evalue=3e-11, Organism=Homo sapiens, GI262206069, Length=478, Percent_Identity=23.0125523012552, Blast_Score=68, Evalue=3e-11, Organism=Homo sapiens, GI262206063, Length=478, Percent_Identity=23.0125523012552, Blast_Score=68, Evalue=3e-11, Organism=Escherichia coli, GI87081859, Length=430, Percent_Identity=26.7441860465116, Blast_Score=114, Evalue=3e-26, Organism=Escherichia coli, GI1786534, Length=193, Percent_Identity=30.5699481865285, Blast_Score=99, Evalue=1e-21, Organism=Caenorhabditis elegans, GI25147564, Length=205, Percent_Identity=30.7317073170732, Blast_Score=88, Evalue=2e-17, Organism=Caenorhabditis elegans, GI115532990, Length=208, Percent_Identity=28.3653846153846, Blast_Score=79, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6325260, Length=468, Percent_Identity=20.7264957264957, Blast_Score=96, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6324292, Length=182, Percent_Identity=26.9230769230769, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24651449, Length=546, Percent_Identity=21.7948717948718, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI85815873, Length=430, Percent_Identity=24.1860465116279, Blast_Score=87, Evalue=6e-17, Organism=Drosophila melanogaster, GI24645213, Length=204, Percent_Identity=28.4313725490196, Blast_Score=84, Evalue=4e-16, Organism=Drosophila melanogaster, GI24649801, Length=435, Percent_Identity=23.9080459770115, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI19922482, Length=431, Percent_Identity=22.2737819025522, Blast_Score=80, Evalue=8e-15, Organism=Drosophila melanogaster, GI24647160, Length=141, Percent_Identity=31.2056737588652, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI21355087, Length=141, Percent_Identity=31.2056737588652, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002645 - InterPro: IPR001902 - InterPro: IPR011547 [H]
Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]
EC number: 4.2.1.1
Molecular weight: Translated: 80567; Mature: 80436
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: PS00704 PROK_CO2_ANHYDRASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIPRSQHMSTAVNSCTEAPASRSQWMLANLRHDVPASLVVFLVALPLSLGIAIASGAPI CCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHH IAGVIAAVVGGIVAGAVGGSPVQVSGPAAGLTVVVAELIDELGWPMLCLMTIAAGALQIV HHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH FGLSRMARAALAIAPVVVHAMLAGIGITIALQQIHVLLGGTSHSSAWRNIVALPDGILHH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEECCCHHHHH ELHEVIVGGTVIAILLMWSKLPAKVRIIPGPLVAIAGATVLALLPVLQTERIDLQGNFFD HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCEECCCCEEC AIGLPKLAEMSPGGQPWSHEISAIALGVLTIALIASVESLLSAVGVDKLHHGPRTDFNRE CCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCHH MVGQGSANVVSGLLGGLPITGVIVRSSANVAAGARTRMSTILHGVWILLFASLFTNLVEL HHCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPKAALAGLLIVIGAQLVKLAHIKLAWRTGNFVIYAITIVCVVFLNLLEGVAIGLVVAIV HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH FLLVRVVRAPVEVKPVGGEQSKRWRVDIDGTLSFLLLPRLTTVLSKLPEGSEVTLNLNAD HHHHHHHHCCCEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECCH YIDDSVSEAISDWRRAHETRGGVVAIVETSPAKLHHAHARPPKRHFASDPIGLVPWRSAR HCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCHHHCCCCCCCCCCCCCCC GKDRGSASVLDRIDEYHRNGAAVLHPHIAGLTDSQDPYELFLTCADSRILPNVITASGPG CCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHEEEEECCCCCCCCCEECCCCC DLYTVRNLGNLVPTDPDDRSVDAALDFAVNQLGVSSVVVCGHSSCAAMTALLEDDPANTT CEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCH TPMMRWLENAHDSLVVFRNHHPARRSAESAGYPEADQLSIVNVAVQVERLTRHPILATAV HHHHHHHHCCCCCEEEEECCCCHHHCCCCCCCCCCCCEEHHHHHHHHHHHHCCCHHHHHH AAADLQVIGIFFDISTARVYEVGPNGIICPDEPADRPVDHESAQ HHHCEEEEEEEEEECCEEEEEECCCCEECCCCCCCCCCCCCCCC >Mature Secondary Structure TIPRSQHMSTAVNSCTEAPASRSQWMLANLRHDVPASLVVFLVALPLSLGIAIASGAPI CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHH IAGVIAAVVGGIVAGAVGGSPVQVSGPAAGLTVVVAELIDELGWPMLCLMTIAAGALQIV HHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH FGLSRMARAALAIAPVVVHAMLAGIGITIALQQIHVLLGGTSHSSAWRNIVALPDGILHH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEECCCHHHHH ELHEVIVGGTVIAILLMWSKLPAKVRIIPGPLVAIAGATVLALLPVLQTERIDLQGNFFD HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCEECCCCEEC AIGLPKLAEMSPGGQPWSHEISAIALGVLTIALIASVESLLSAVGVDKLHHGPRTDFNRE CCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCHH MVGQGSANVVSGLLGGLPITGVIVRSSANVAAGARTRMSTILHGVWILLFASLFTNLVEL HHCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPKAALAGLLIVIGAQLVKLAHIKLAWRTGNFVIYAITIVCVVFLNLLEGVAIGLVVAIV HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH FLLVRVVRAPVEVKPVGGEQSKRWRVDIDGTLSFLLLPRLTTVLSKLPEGSEVTLNLNAD HHHHHHHHCCCEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECCH YIDDSVSEAISDWRRAHETRGGVVAIVETSPAKLHHAHARPPKRHFASDPIGLVPWRSAR HCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCHHHCCCCCCCCCCCCCCC GKDRGSASVLDRIDEYHRNGAAVLHPHIAGLTDSQDPYELFLTCADSRILPNVITASGPG CCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHEEEEECCCCCCCCCEECCCCC DLYTVRNLGNLVPTDPDDRSVDAALDFAVNQLGVSSVVVCGHSSCAAMTALLEDDPANTT CEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCH TPMMRWLENAHDSLVVFRNHHPARRSAESAGYPEADQLSIVNVAVQVERLTRHPILATAV HHHHHHHHCCCCCEEEEECCCCHHHCCCCCCCCCCCCEEHHHHHHHHHHHHCCCHHHHHH AAADLQVIGIFFDISTARVYEVGPNGIICPDEPADRPVDHESAQ HHHCEEEEEEEEEECCEEEEEECCCCEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: H2CO3
Specific reaction: H2CO3 = CO2 + H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]