Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is entC_1
Identifier: 121639102
GI number: 121639102
Start: 3544736
End: 3545854
Strand: Direct
Name: entC_1
Synonym: BCG_3242
Alternate gene names: 121639102
Gene position: 3544736-3545854 (Clockwise)
Preceding gene: 121639101
Following gene: 121639103
Centisome position: 81.03
GC content: 66.4
Gene sequence:
>1119_bases GTGAGCGCACACGTGGCAACCTTGCACCCAGAACCACCGTTCGCACTGTGCGGACCAAGAGGCACCCTGATTGCCCGCGG GGTGCGGACACGATACTGCGACGTGCGGGCCGCGCAAGCGGCACTTCGCTCAGGTACAGCACCAATACTGTTGGGCGCGT TGCCTTTCGACGTGAGCAGACCCGCCGCATTGATGGTGCCGGATGGCGTGCTGCGGGCCCGGAAGCTGCCTGACTGGCCG ACCGGCCCGCTGCCCAAGGTACGCGTCGCCGCCGCCCTTCCGCCACCTGCCGACTACCTGACCCGGATCGGCCGCGCACG GGATCTGCTGGCCGCCTTCGACGGCCCGTTGCACAAAGTGGTGCTCGCGCGCGCCGTGCAACTGACCGCCGATGCTCCGC TGGACGCGCGGGTACTGTTGCGCAGGTTGGTCGTCGCCGACCCGACCGCTTACGGCTATCTCGTCGACCTCACCTCTGCG GGCAACGACGACACCGGGGCAGCCCTGGTCGGCGCCAGCCCAGAGCTTCTGGTCGCACGATCCGGCAATCGCGTCATGTG CAAGCCATTTGCCGGCTCAGCCCCACGCGCCGCCGACCCCAAACTCGACGCCGCCAACGCGGCCGCACTAGCCAGTTCGG CCAAGAACCGACACGAACACCAATTGGTCGTCGACACGATGCGGGTAGCCCTAGAGCCACTATGCGAGGACCTGACAATC CCAGCCCAGCCCCAGTTGAACCGCACCGCAGCCGTTTGGCATCTGTGCACCGCGATCACCGGCCGGCTGCGCAACATCTC GACGACGGCAATCGATCTGGCTTTGGCGCTACATCCCACCCCGGCGGTTGGTGGGGTCCCGACAAAAGCTGCCACCGAGC TCATCGCCGAACTCGAGGGCGACCGTGGCTTCTACGCCGGCGCGGTTGGTTGGTGCGACGGCCGGGGCGACGGCCATTGG GTGGTGTCTATCCGGTGCGCGCAACTTTCGGCTGATCGACGCGCAGCCCTTGCGCACGCTGGCGGTGGCATCGTCGCCGA ATCAGACCCCGATGACGAACTTGAAGAAACCACAACGAAGTTCGCCACGATATTGACCGCACTGGGAGTTGAGCAGTGA
Upstream 100 bases:
>100_bases CGATGCCCACCGCCTCGATCGGGATCTGCGGGTTCGAGCACGGCGTGCGTCAGCTCGCCGTGCTCGGGTTGACCGGTCAT CCGCAGCCGATCGCAGCCGG
Downstream 100 bases:
>100_bases CCGATACCATCCGCCGCGCTACACCGGCGGATACCGCCGACATCGTGGCCATGATTCACGCGCTGGGCGGAATTCGAGTA TGCCGCCGATCAATGCACTG
Product: putative isochorismate synthase entC
Products: NA
Alternate protein names: Isochorismate mutase
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MSAHVATLHPEPPFALCGPRGTLIARGVRTRYCDVRAAQAALRSGTAPILLGALPFDVSRPAALMVPDGVLRARKLPDWP TGPLPKVRVAAALPPPADYLTRIGRARDLLAAFDGPLHKVVLARAVQLTADAPLDARVLLRRLVVADPTAYGYLVDLTSA GNDDTGAALVGASPELLVARSGNRVMCKPFAGSAPRAADPKLDAANAAALASSAKNRHEHQLVVDTMRVALEPLCEDLTI PAQPQLNRTAAVWHLCTAITGRLRNISTTAIDLALALHPTPAVGGVPTKAATELIAELEGDRGFYAGAVGWCDGRGDGHW VVSIRCAQLSADRRAALAHAGGGIVAESDPDDELEETTTKFATILTALGVEQ
Sequences:
>Translated_372_residues MSAHVATLHPEPPFALCGPRGTLIARGVRTRYCDVRAAQAALRSGTAPILLGALPFDVSRPAALMVPDGVLRARKLPDWP TGPLPKVRVAAALPPPADYLTRIGRARDLLAAFDGPLHKVVLARAVQLTADAPLDARVLLRRLVVADPTAYGYLVDLTSA GNDDTGAALVGASPELLVARSGNRVMCKPFAGSAPRAADPKLDAANAAALASSAKNRHEHQLVVDTMRVALEPLCEDLTI PAQPQLNRTAAVWHLCTAITGRLRNISTTAIDLALALHPTPAVGGVPTKAATELIAELEGDRGFYAGAVGWCDGRGDGHW VVSIRCAQLSADRRAALAHAGGGIVAESDPDDELEETTTKFATILTALGVEQ >Mature_371_residues SAHVATLHPEPPFALCGPRGTLIARGVRTRYCDVRAAQAALRSGTAPILLGALPFDVSRPAALMVPDGVLRARKLPDWPT GPLPKVRVAAALPPPADYLTRIGRARDLLAAFDGPLHKVVLARAVQLTADAPLDARVLLRRLVVADPTAYGYLVDLTSAG NDDTGAALVGASPELLVARSGNRVMCKPFAGSAPRAADPKLDAANAAALASSAKNRHEHQLVVDTMRVALEPLCEDLTIP AQPQLNRTAAVWHLCTAITGRLRNISTTAIDLALALHPTPAVGGVPTKAATELIAELEGDRGFYAGAVGWCDGRGDGHWV VSIRCAQLSADRRAALAHAGGGIVAESDPDDELEETTTKFATILTALGVEQ
Specific function: Might be involved in the biosynthesis of menaquinone. Converts chorismate to isochorismate
COG id: COG1169
COG function: function code HQ; Isochorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the isochorismate synthase family
Homologues:
Organism=Escherichia coli, GI1786809, Length=330, Percent_Identity=39.3939393939394, Blast_Score=218, Evalue=7e-58, Organism=Escherichia coli, GI1788114, Length=204, Percent_Identity=32.843137254902, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1787518, Length=270, Percent_Identity=30, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI87082077, Length=265, Percent_Identity=31.3207547169811, Blast_Score=86, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6320935, Length=229, Percent_Identity=36.6812227074236, Blast_Score=110, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6324361, Length=405, Percent_Identity=21.2345679012346, Blast_Score=80, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MENF_MYCTU (O05851)
Other databases:
- EMBL: BX842582 - EMBL: AE000516 - PIR: H70595 - RefSeq: NP_217731.1 - RefSeq: NP_337839.1 - HSSP: P05041 - ProteinModelPortal: O05851 - SMR: O05851 - EnsemblBacteria: EBMYCT00000003063 - EnsemblBacteria: EBMYCT00000069773 - GeneID: 888824 - GeneID: 923007 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT3311 - KEGG: mtu:Rv3215 - TIGR: MT3311 - TubercuList: Rv3215 - GeneTree: EBGT00050000015088 - HOGENOM: HBG405459 - OMA: ESSFFFA - ProtClustDB: CLSK872155 - InterPro: IPR005801 - InterPro: IPR015890 - InterPro: IPR004561 - Gene3D: G3DSA:3.60.120.10 - PANTHER: PTHR11236:SF3 - PANTHER: PTHR11236 - TIGRFAMs: TIGR00543
Pfam domain/function: PF00425 Chorismate_bind; SSF56322 TRPE_1_chor_bd
EC number: =5.4.4.2
Molecular weight: Translated: 38938; Mature: 38807
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAHVATLHPEPPFALCGPRGTLIARGVRTRYCDVRAAQAALRSGTAPILLGALPFDVSR CCCCEEEECCCCCEEEECCCCCEEECCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC PAALMVPDGVLRARKLPDWPTGPLPKVRVAAALPPPADYLTRIGRARDLLAAFDGPLHKV CEEEECCCHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHH VLARAVQLTADAPLDARVLLRRLVVADPTAYGYLVDLTSAGNDDTGAALVGASPELLVAR HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEECCCCCEEEEE SGNRVMCKPFAGSAPRAADPKLDAANAAALASSAKNRHEHQLVVDTMRVALEPLCEDLTI CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC PAQPQLNRTAAVWHLCTAITGRLRNISTTAIDLALALHPTPAVGGVPTKAATELIAELEG CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHCC DRGFYAGAVGWCDGRGDGHWVVSIRCAQLSADRRAALAHAGGGIVAESDPDDELEETTTK CCCEEECEEEEECCCCCCEEEEEEEEEECCCCHHHHHHHCCCCEEECCCCCHHHHHHHHH FATILTALGVEQ HHHHHHHHCCCC >Mature Secondary Structure SAHVATLHPEPPFALCGPRGTLIARGVRTRYCDVRAAQAALRSGTAPILLGALPFDVSR CCCEEEECCCCCEEEECCCCCEEECCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC PAALMVPDGVLRARKLPDWPTGPLPKVRVAAALPPPADYLTRIGRARDLLAAFDGPLHKV CEEEECCCHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHH VLARAVQLTADAPLDARVLLRRLVVADPTAYGYLVDLTSAGNDDTGAALVGASPELLVAR HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEECCCCCEEEEE SGNRVMCKPFAGSAPRAADPKLDAANAAALASSAKNRHEHQLVVDTMRVALEPLCEDLTI CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC PAQPQLNRTAAVWHLCTAITGRLRNISTTAIDLALALHPTPAVGGVPTKAATELIAELEG CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHCC DRGFYAGAVGWCDGRGDGHWVVSIRCAQLSADRRAALAHAGGGIVAESDPDDELEETTTK CCCEEECEEEEECCCCCCEEEEEEEEEECCCCHHHHHHHCCCCEEECCCCCHHHHHHHHH FATILTALGVEQ HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036