Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is lppOb [H]
Identifier: 121638172
GI number: 121638172
Start: 2539842
End: 2540207
Strand: Direct
Name: lppOb [H]
Synonym: BCG_2307
Alternate gene names: 121638172
Gene position: 2539842-2540207 (Clockwise)
Preceding gene: 121638171
Following gene: 121638173
Centisome position: 58.06
GC content: 60.38
Gene sequence:
>366_bases ATGGTAGAGGGACATACGCACACAATTTCCGGAGCGGTCGAGTGCCGCACCTCGCCAGCGGTAAGGACGGCGACGCCGTC GGAGTCGGGGACTCAAACTACACGGGTTAACGCACACGACGATTCGGCCTCGGTGACACTGTCCCTGTCCGACTCCACGC CCCCAGACGTCAATGGTTTTGGTATCTCCCTTAAAATCGGAAGCGTCGACTACCAGATGCCCTACCAGCCGGTTCAGTCC CCAACTCAGGTCGAAGCGACCAGGCAGGGCAAGAGTTACACACTGACCGGGACGGGTCACGCGGTGATCCCGGGCCAAAC CGGCATGCGTGAGCTGCCGTTCGGGGTACATGTAACCTGTCCGTAA
Upstream 100 bases:
>100_bases TCGGCGTGTCGGCACTCGGGGCAACTCTGCCGGCCTGCTCCGCACACAGCGGGCCGGGTTCTCCCCCAGTGCGCCGTCAG CTCCCGCGGCCGCGACCGTC
Downstream 100 bases:
>100_bases CTACACTGATTGCGCGACAAGGGAATTAGCCGCGTTGGCAGGCAACACGGAGGTGACCGGTGCAAGCCCGTGGTCAGGTC CTGATCACCGCCGCGGAACT
Product: putative lipoprotein lppOb
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MVEGHTHTISGAVECRTSPAVRTATPSESGTQTTRVNAHDDSASVTLSLSDSTPPDVNGFGISLKIGSVDYQMPYQPVQS PTQVEATRQGKSYTLTGTGHAVIPGQTGMRELPFGVHVTCP
Sequences:
>Translated_121_residues MVEGHTHTISGAVECRTSPAVRTATPSESGTQTTRVNAHDDSASVTLSLSDSTPPDVNGFGISLKIGSVDYQMPYQPVQS PTQVEATRQGKSYTLTGTGHAVIPGQTGMRELPFGVHVTCP >Mature_121_residues MVEGHTHTISGAVECRTSPAVRTATPSESGTQTTRVNAHDDSASVTLSLSDSTPPDVNGFGISLKIGSVDYQMPYQPVQS PTQVEATRQGKSYTLTGTGHAVIPGQTGMRELPFGVHVTCP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12683; Mature: 12683
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEGHTHTISGAVECRTSPAVRTATPSESGTQTTRVNAHDDSASVTLSLSDSTPPDVNGF CCCCCEEEECCEEEECCCCCEEEECCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCE GISLKIGSVDYQMPYQPVQSPTQVEATRQGKSYTLTGTGHAVIPGQTGMRELPFGVHVTC EEEEEECCEEEECCCCCCCCCCEEEEECCCCEEEEECCCCEEECCCCCCEECCCEEEEEC P C >Mature Secondary Structure MVEGHTHTISGAVECRTSPAVRTATPSESGTQTTRVNAHDDSASVTLSLSDSTPPDVNGF CCCCCEEEECCEEEECCCCCEEEECCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCE GISLKIGSVDYQMPYQPVQSPTQVEATRQGKSYTLTGTGHAVIPGQTGMRELPFGVHVTC EEEEEECCEEEECCCCCCCCCCEEEEECCCCEEEEECCCCEEECCCCCCEECCCEEEEEC P C
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]