Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121638149
Identifier: 121638149
GI number: 121638149
Start: 2520096
End: 2521262
Strand: Reverse
Name: 121638149
Synonym: BCG_2284c
Alternate gene names: NA
Gene position: 2521262-2520096 (Counterclockwise)
Preceding gene: 121638150
Following gene: 121638146
Centisome position: 57.64
GC content: 56.9
Gene sequence:
>1167_bases ATGAAGGCTCTCCGTTCGTCGTCTCGACTTTCCCGGTGGCGCGAGTGGGCCGCACCGCTGTGGGTCGGCTGCAACTTCTC GGCCTGGATGCGGCTTTTGATCCGTAACCGCTTCGCCGTGCATCACAGCCGCTGGCACTTCGCGGTCCTCTATACGTTTC TCAGCATGGTCAATTCCTGTCTGGGGTTGTGGCAGAAGATCGTTTTCGGTAGGCGAGTGGCCGAAACGGTGATCGCCGAT CCGCCAATCTTCATTGTTGGGCATTGGCGTACCGGCACCACCTTGCTGCATGAACTGTTGGTCGTCGATGATCGCCACAC CGGTCCCACCGGCTACGAATGCCTTGCGCCACACCATTTTCTACTGACCGAGTGGTTTGCGCCATATGTGGAATTCCTGG TATCGAAGCATCGGGCAATGGACAACATGGATTTGAGCTTGCATCACCCGCAGGAAGACGAGTTCGTGTGGTGTATGCAG GGCCTGCCGTCGCCGTATCTGACCATCGCATTCCCGAACCGGCCGCCCCAGTATGAGGAGTACCTGGATCTAGAGCAGGT GGCACCGCGAGAACTAGAAATCTGGAAACGGACCCTGTTCCGGTTCGTTCAGCAGGTGTACTTCCGCCGTCGCAAGACGG TGATCCTCAAGAATCCAACGCATAGTTTTCGAATCAAGGTGCTGCTGGAGGTATTCCCGCAAGCGAAGTTCATCCACATC GTCCGAGATCCCTATGTGGTCTATCCATCAACCATCCATCTTCATAAGGCGCTGTACCGCATACATGGCTTGCAACAACC GACGTTCGACGGGTTGGACGACAAGGTCGTGTCGACCTACGTCGACCTATACCGAAAGTTGGACGAAGGCCGAGAACTCG TTGACCCCACACGCTTTTACGAATTGCGTTATGAGGATTTGATCGGTGATCCCGAGGGACAGCTGCGCCGGCTATACCAG CACCTGGGACTGGGCGACTTCGAGTGTTACCTGCCGCGTCTGCGGCAATACCTAGCTGACCATGCGGACTACAAAACCAA CAGCTATCAACTGACCGTCGAGCAGCGTGCGATTGTCGATGAGCACTGGGGCGAGATCATCGACCGCTACGGCTACGATC GTCACACACCTGAGCCGGCACGTCTTCGGCCTGCGGTTGGCGGCTGA
Upstream 100 bases:
>100_bases TCGACCGAATAGAGGTGGTCGAGCCGCCGACGTGGACGACAAACGCCAACCTTCGCGGCTTGACCCGGTTACGGGTCGCC GTTACCCCCCGCGTCGCACC
Downstream 100 bases:
>100_bases TCAAGCCGCCTTTGGCTCTCGACCGCACTCGAACGCGTCGGCAGCGGTCATGCCAGACGGGGCGTCTCGCCAACATCATC CTGTTCGGCCACCGCGAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MKALRSSSRLSRWREWAAPLWVGCNFSAWMRLLIRNRFAVHHSRWHFAVLYTFLSMVNSCLGLWQKIVFGRRVAETVIAD PPIFIVGHWRTGTTLLHELLVVDDRHTGPTGYECLAPHHFLLTEWFAPYVEFLVSKHRAMDNMDLSLHHPQEDEFVWCMQ GLPSPYLTIAFPNRPPQYEEYLDLEQVAPRELEIWKRTLFRFVQQVYFRRRKTVILKNPTHSFRIKVLLEVFPQAKFIHI VRDPYVVYPSTIHLHKALYRIHGLQQPTFDGLDDKVVSTYVDLYRKLDEGRELVDPTRFYELRYEDLIGDPEGQLRRLYQ HLGLGDFECYLPRLRQYLADHADYKTNSYQLTVEQRAIVDEHWGEIIDRYGYDRHTPEPARLRPAVGG
Sequences:
>Translated_388_residues MKALRSSSRLSRWREWAAPLWVGCNFSAWMRLLIRNRFAVHHSRWHFAVLYTFLSMVNSCLGLWQKIVFGRRVAETVIAD PPIFIVGHWRTGTTLLHELLVVDDRHTGPTGYECLAPHHFLLTEWFAPYVEFLVSKHRAMDNMDLSLHHPQEDEFVWCMQ GLPSPYLTIAFPNRPPQYEEYLDLEQVAPRELEIWKRTLFRFVQQVYFRRRKTVILKNPTHSFRIKVLLEVFPQAKFIHI VRDPYVVYPSTIHLHKALYRIHGLQQPTFDGLDDKVVSTYVDLYRKLDEGRELVDPTRFYELRYEDLIGDPEGQLRRLYQ HLGLGDFECYLPRLRQYLADHADYKTNSYQLTVEQRAIVDEHWGEIIDRYGYDRHTPEPARLRPAVGG >Mature_388_residues MKALRSSSRLSRWREWAAPLWVGCNFSAWMRLLIRNRFAVHHSRWHFAVLYTFLSMVNSCLGLWQKIVFGRRVAETVIAD PPIFIVGHWRTGTTLLHELLVVDDRHTGPTGYECLAPHHFLLTEWFAPYVEFLVSKHRAMDNMDLSLHHPQEDEFVWCMQ GLPSPYLTIAFPNRPPQYEEYLDLEQVAPRELEIWKRTLFRFVQQVYFRRRKTVILKNPTHSFRIKVLLEVFPQAKFIHI VRDPYVVYPSTIHLHKALYRIHGLQQPTFDGLDDKVVSTYVDLYRKLDEGRELVDPTRFYELRYEDLIGDPEGQLRRLYQ HLGLGDFECYLPRLRQYLADHADYKTNSYQLTVEQRAIVDEHWGEIIDRYGYDRHTPEPARLRPAVGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2267_MYCTU (P64963)
Other databases:
- EMBL: BX842579 - EMBL: AE000516 - PIR: G70729 - RefSeq: NP_216783.1 - RefSeq: NP_336797.1 - ProteinModelPortal: P64963 - EnsemblBacteria: EBMYCT00000001716 - EnsemblBacteria: EBMYCT00000072935 - GeneID: 888487 - GeneID: 924097 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2329 - KEGG: mtu:Rv2267c - TIGR: MT2329 - TubercuList: Rv2267c - GeneTree: EBGT00050000016940 - HOGENOM: HBG167105 - OMA: FFTNTIQ - ProtClustDB: CLSK872041 - InterPro: IPR000863
Pfam domain/function: PF00685 Sulfotransfer_1
EC number: NA
Molecular weight: Translated: 46062; Mature: 46062
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALRSSSRLSRWREWAAPLWVGCNFSAWMRLLIRNRFAVHHSRWHFAVLYTFLSMVNSC CCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LGLWQKIVFGRRVAETVIADPPIFIVGHWRTGTTLLHELLVVDDRHTGPTGYECLAPHHF HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHCCHHH LLTEWFAPYVEFLVSKHRAMDNMDLSLHHPQEDEFVWCMQGLPSPYLTIAFPNRPPQYEE HHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEHHHHCCCCCEEEEEECCCCCCHHH YLDLEQVAPRELEIWKRTLFRFVQQVYFRRRKTVILKNPTHSFRIKVLLEVFPQAKFIHI HCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHCCCCCEEEE VRDPYVVYPSTIHLHKALYRIHGLQQPTFDGLDDKVVSTYVDLYRKLDEGRELVDPTRFY ECCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCHHHHH ELRYEDLIGDPEGQLRRLYQHLGLGDFECYLPRLRQYLADHADYKTNSYQLTVEQRAIVD HHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHH EHWGEIIDRYGYDRHTPEPARLRPAVGG HHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKALRSSSRLSRWREWAAPLWVGCNFSAWMRLLIRNRFAVHHSRWHFAVLYTFLSMVNSC CCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LGLWQKIVFGRRVAETVIADPPIFIVGHWRTGTTLLHELLVVDDRHTGPTGYECLAPHHF HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHCCHHH LLTEWFAPYVEFLVSKHRAMDNMDLSLHHPQEDEFVWCMQGLPSPYLTIAFPNRPPQYEE HHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEHHHHCCCCCEEEEEECCCCCCHHH YLDLEQVAPRELEIWKRTLFRFVQQVYFRRRKTVILKNPTHSFRIKVLLEVFPQAKFIHI HCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHCCCCCEEEE VRDPYVVYPSTIHLHKALYRIHGLQQPTFDGLDDKVVSTYVDLYRKLDEGRELVDPTRFY ECCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCHHHHH ELRYEDLIGDPEGQLRRLYQHLGLGDFECYLPRLRQYLADHADYKTNSYQLTVEQRAIVD HHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHH EHWGEIIDRYGYDRHTPEPARLRPAVGG HHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036