Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121638112
Identifier: 121638112
GI number: 121638112
Start: 2481380
End: 2482117
Strand: Reverse
Name: 121638112
Synonym: BCG_2247c
Alternate gene names: NA
Gene position: 2482117-2481380 (Counterclockwise)
Preceding gene: 121638113
Following gene: 121638111
Centisome position: 56.74
GC content: 65.31
Gene sequence:
>738_bases ATGAAAGCCGGAGTGGCACAGCAACGGTCGCTACTGGAATTGGCGAAGCTGGATGCTGAGCTGACCCGGATCGCGCATCG GGCTACCCATCTGCCGCAGCGGGCGGCTTACCAGCAGGTGCAGGCCGAGCACAACGCCGCCAACGACAGGATGGCGGCCC TGCGAATCGCGGCGGAGGACTTGGACGGCCAGGTGTCGCGTTTTGAGTCGGAGATCGATGCGGTGCGTAAGCGTGGCGAC CGGGACCGGTCGTTGCTCACTTCGGGTGCAACGGACGCCAAGCAATTGGCTGATCTGCAGCACGAGCTCGACAGCTTGCA ACGCCGTCAAGCCAGTTTGGAAGATGCCCTGCTGGAGGTGCTGGAACGCCGCGAGGAGCTGCAGGCTCAACAGACCGCCG AGTCGCGGGCGCTCCAAGCGTTGCGGGCCGACCTGGCCGCCGCCCAGCAGGCTTTGGACGAGGCACTTGCCGAAATCGAC CAAGCCCGGCACCAACATTCATCGCAACGCGACATGCTGACGGCGACACTTGATCCCGAGCTTGCGGGGCTCTACGAAAG ACAGCGGGCCGGAGGCGGGCCAGGGGCCGGGCGGTTGCAAGGTCATCGATGTGGTGCCTGCCGGATCGAGATCGGCCGCG GCGAGCTGGCCCAGATCTCGGCGGCCGCCGAGGATGAAGTGGTGCGCTGCCCGGAATGCGGAGCGATCTTGTTGCAGCTC GAAGGATTTGAGGAGTGA
Upstream 100 bases:
>100_bases AAGTGTTGCGGTCTCATTTCGGCGCGTCGCTGCCGGTGCGTGTGTGCACCATCTGCACCGACCCGTGGAACCTCGATCAC GAAACTGGGAGAGATCAGGC
Downstream 100 bases:
>100_bases AAGTTGTCATCGAAGCCGACGGCGGATCGCGGGGCAATCCCGGACCGGCCGGATACGGCGCGGTGGTGTGGACCGCCGAT CACTCCACCGTGCTGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MKAGVAQQRSLLELAKLDAELTRIAHRATHLPQRAAYQQVQAEHNAANDRMAALRIAAEDLDGQVSRFESEIDAVRKRGD RDRSLLTSGATDAKQLADLQHELDSLQRRQASLEDALLEVLERREELQAQQTAESRALQALRADLAAAQQALDEALAEID QARHQHSSQRDMLTATLDPELAGLYERQRAGGGPGAGRLQGHRCGACRIEIGRGELAQISAAAEDEVVRCPECGAILLQL EGFEE
Sequences:
>Translated_245_residues MKAGVAQQRSLLELAKLDAELTRIAHRATHLPQRAAYQQVQAEHNAANDRMAALRIAAEDLDGQVSRFESEIDAVRKRGD RDRSLLTSGATDAKQLADLQHELDSLQRRQASLEDALLEVLERREELQAQQTAESRALQALRADLAAAQQALDEALAEID QARHQHSSQRDMLTATLDPELAGLYERQRAGGGPGAGRLQGHRCGACRIEIGRGELAQISAAAEDEVVRCPECGAILLQL EGFEE >Mature_245_residues MKAGVAQQRSLLELAKLDAELTRIAHRATHLPQRAAYQQVQAEHNAANDRMAALRIAAEDLDGQVSRFESEIDAVRKRGD RDRSLLTSGATDAKQLADLQHELDSLQRRQASLEDALLEVLERREELQAQQTAESRALQALRADLAAAQQALDEALAEID QARHQHSSQRDMLTATLDPELAGLYERQRAGGGPGAGRLQGHRCGACRIEIGRGELAQISAAAEDEVVRCPECGAILLQL EGFEE
Specific function: Unknown
COG id: COG1579
COG function: function code R; Zn-ribbon protein, possibly nucleic acid-binding
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003743 [H]
Pfam domain/function: PF02591 DUF164 [H]
EC number: NA
Molecular weight: Translated: 26823; Mature: 26823
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAGVAQQRSLLELAKLDAELTRIAHRATHLPQRAAYQQVQAEHNAANDRMAALRIAAED CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LDGQVSRFESEIDAVRKRGDRDRSLLTSGATDAKQLADLQHELDSLQRRQASLEDALLEV HCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LERREELQAQQTAESRALQALRADLAAAQQALDEALAEIDQARHQHSSQRDMLTATLDPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEHHCCHH LAGLYERQRAGGGPGAGRLQGHRCGACRIEIGRGELAQISAAAEDEVVRCPECGAILLQL HHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCEECCCCCEEEEEE EGFEE CCCCC >Mature Secondary Structure MKAGVAQQRSLLELAKLDAELTRIAHRATHLPQRAAYQQVQAEHNAANDRMAALRIAAED CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LDGQVSRFESEIDAVRKRGDRDRSLLTSGATDAKQLADLQHELDSLQRRQASLEDALLEV HCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LERREELQAQQTAESRALQALRADLAAAQQALDEALAEIDQARHQHSSQRDMLTATLDPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEHHCCHH LAGLYERQRAGGGPGAGRLQGHRCGACRIEIGRGELAQISAAAEDEVVRCPECGAILLQL HHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCEECCCCCEEEEEE EGFEE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]