Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637984
Identifier: 121637984
GI number: 121637984
Start: 2339842
End: 2341494
Strand: Direct
Name: 121637984
Synonym: BCG_2119
Alternate gene names: NA
Gene position: 2339842-2341494 (Clockwise)
Preceding gene: 121637975
Following gene: 121637985
Centisome position: 53.49
GC content: 68.72
Gene sequence:
>1653_bases ATGGCCGGGGCACTGTTCGAACCGTCGTTCGCCGCAGCGCACCCAGCGGGGCTTCTCAGACGACCCGTGACGCGAACCGT CGTGCTGTCGGTGGCCGCTACTAGTATCGCACACATGTTCGAGATATCGCTGCCGGACCCGACGGAGCTGTGCCGATCCG ATGATGGCGCGCTGGTGGCCGCGATCGAGGACTGCGCTCGTGTGGAGGCGGCTGCGAGCGCCCGGCGGTTGTCGGCGATC GCCGAGCTGACCGGCCGGCGCACCGGCGCGGACCAGCGGGCCGACTGGGCGTGTGACTTCTGGGACTGCGCGGCCGCGGA GGTGGCTGCGGCGTTGACTATCAGCCACGGCAAAGCCTCCGGACAAATGCATCTGAGCCTTGCCCTGAACCGGCTGCCCC AGGTGGCGGCGTTGTTTTTGGCCGGGCATCTTGGTGCGCGGCTTTTCTCGATCATCGCCTGGCGGACCTACCTCGTTCGC GACCCGCACGCACTGAGTCTGCTCGATGCCGCCCTGGCCGAACACGCCGGCGCGTGGGGGCCGCTGTCGGCCCCCAAACT GGAAAAGGCCATCGACTCCTGGATCGATCGCTACGATCCCGGGGCGCTGCGGCGCAGCCGTATCTCGGCCCGCACCCGCG ACCTATGCATCGGTGATCCCGATGAGGACGCCGGCACCGCCGCGCTGTGGGGCCGGCTGTATGCCACCGACGCCGCGATG CTGGATCGCCGGCTCACCGAGATGGCCCACGGCGTGTGCGAGGATGACCCGCGCACCCTGGCCCAGCGCCGCGCCGACGC GCTGGGCGCGCTGGCCGCCGGCGCCGACCACCTGGCGTGCGGCTGCGGCAAGCCCGACTGCCCCTCCGGTGCCGGCAACG ACGAGCGGGCCGCCGGTGTGGTCATCCACGTCGTCGCCGACGCCTCAGCACTTGACGCACAACCCGACCCACACCTATCC GGCGACGAACCCCCTTCGCGGCCCCTCACCCCGGAGACGACCCTGTTCGAGGCGTTGACACCCGACCCCGAACCCGATCC CCCCGCCACCCACGCGCCGGCCGAGCTGATCACCACCGGCGGCGGTGTGGTGCCCGCGCCGCTGCTGGCCGAACTCATCC GGGGTGGGGCCACCATCAGCCAAGTGCGCCATCCCGGCGATCTCGCAGCAGAGCCGCACTACCGGCCGTCGGCCAAGCTG GCTGAATTCGTCCGGATGCGGGATTTGACGTGCCGGTTTCCCGGGTGTGACGTGCCCGCCGAGTTTTGTGATATCGACCA TTCGGCGCCCTGGCCGTTGGGGCCGACGCATCCATCAAATCTGAAGTGCGCGTGTAGAAAACACCACCTTTTGAAAACTT TCTGGACGGGCTGGCGGGATGTGCAGTTACCCGATGGCACGGTCATCTGGACCGCGCCCAACGGCCACACCTACACTACC CATCCCGGCAGCCGCATCTTCTTTCCCACCTGGCACACCACCACCGCCGAACTACCCCAAACATCAACGGCAGCAGTCAA CGTCGACGCACGCGGCCTGATGATGCCGCGACGGCGCCGGACCCGAGCCGCCGAGCTGGCCCACCGCATCAACGCCGAAC GCGCCCTCAACGACGCGTACATGGCCGAACGCAACAAGCCACCATCGTTCTGA
Upstream 100 bases:
>100_bases CCACCCTCAGTCGGGGTGTTCGCCAGATTCGTCGCAGCTCAGCGCTGCGCCGGCGCCAGCATTGGCGATGGCTGGTGGTT AACGCGAGTGGTCGAAGGTG
Downstream 100 bases:
>100_bases TGGGCGGCTATTCCCACCTCATGTCAAACACCCCTTCTGGATGTCACGCCCCTTCTGGACACCACCGACGAGTTCTCGTG TCGCCGCACCTATCCAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 550; Mature: 549
Protein sequence:
>550_residues MAGALFEPSFAAAHPAGLLRRPVTRTVVLSVAATSIAHMFEISLPDPTELCRSDDGALVAAIEDCARVEAAASARRLSAI AELTGRRTGADQRADWACDFWDCAAAEVAAALTISHGKASGQMHLSLALNRLPQVAALFLAGHLGARLFSIIAWRTYLVR DPHALSLLDAALAEHAGAWGPLSAPKLEKAIDSWIDRYDPGALRRSRISARTRDLCIGDPDEDAGTAALWGRLYATDAAM LDRRLTEMAHGVCEDDPRTLAQRRADALGALAAGADHLACGCGKPDCPSGAGNDERAAGVVIHVVADASALDAQPDPHLS GDEPPSRPLTPETTLFEALTPDPEPDPPATHAPAELITTGGGVVPAPLLAELIRGGATISQVRHPGDLAAEPHYRPSAKL AEFVRMRDLTCRFPGCDVPAEFCDIDHSAPWPLGPTHPSNLKCACRKHHLLKTFWTGWRDVQLPDGTVIWTAPNGHTYTT HPGSRIFFPTWHTTTAELPQTSTAAVNVDARGLMMPRRRRTRAAELAHRINAERALNDAYMAERNKPPSF
Sequences:
>Translated_550_residues MAGALFEPSFAAAHPAGLLRRPVTRTVVLSVAATSIAHMFEISLPDPTELCRSDDGALVAAIEDCARVEAAASARRLSAI AELTGRRTGADQRADWACDFWDCAAAEVAAALTISHGKASGQMHLSLALNRLPQVAALFLAGHLGARLFSIIAWRTYLVR DPHALSLLDAALAEHAGAWGPLSAPKLEKAIDSWIDRYDPGALRRSRISARTRDLCIGDPDEDAGTAALWGRLYATDAAM LDRRLTEMAHGVCEDDPRTLAQRRADALGALAAGADHLACGCGKPDCPSGAGNDERAAGVVIHVVADASALDAQPDPHLS GDEPPSRPLTPETTLFEALTPDPEPDPPATHAPAELITTGGGVVPAPLLAELIRGGATISQVRHPGDLAAEPHYRPSAKL AEFVRMRDLTCRFPGCDVPAEFCDIDHSAPWPLGPTHPSNLKCACRKHHLLKTFWTGWRDVQLPDGTVIWTAPNGHTYTT HPGSRIFFPTWHTTTAELPQTSTAAVNVDARGLMMPRRRRTRAAELAHRINAERALNDAYMAERNKPPSF >Mature_549_residues AGALFEPSFAAAHPAGLLRRPVTRTVVLSVAATSIAHMFEISLPDPTELCRSDDGALVAAIEDCARVEAAASARRLSAIA ELTGRRTGADQRADWACDFWDCAAAEVAAALTISHGKASGQMHLSLALNRLPQVAALFLAGHLGARLFSIIAWRTYLVRD PHALSLLDAALAEHAGAWGPLSAPKLEKAIDSWIDRYDPGALRRSRISARTRDLCIGDPDEDAGTAALWGRLYATDAAML DRRLTEMAHGVCEDDPRTLAQRRADALGALAAGADHLACGCGKPDCPSGAGNDERAAGVVIHVVADASALDAQPDPHLSG DEPPSRPLTPETTLFEALTPDPEPDPPATHAPAELITTGGGVVPAPLLAELIRGGATISQVRHPGDLAAEPHYRPSAKLA EFVRMRDLTCRFPGCDVPAEFCDIDHSAPWPLGPTHPSNLKCACRKHHLLKTFWTGWRDVQLPDGTVIWTAPNGHTYTTH PGSRIFFPTWHTTTAELPQTSTAAVNVDARGLMMPRRRRTRAAELAHRINAERALNDAYMAERNKPPSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv3776
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2100_MYCTU (P64945)
Other databases:
- EMBL: BX842578 - EMBL: AE000516 - PIR: G70768 - RefSeq: NP_216616.1 - RefSeq: NP_336627.1 - EnsemblBacteria: EBMYCT00000002152 - EnsemblBacteria: EBMYCT00000069402 - GeneID: 888454 - GeneID: 924570 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2160 - KEGG: mtu:Rv2100 - TIGR: MT2160 - TubercuList: Rv2100 - GeneTree: EBGT00050000014848 - HOGENOM: HBG564681 - OMA: RNEAYLA - ProtClustDB: CLSK791628 - InterPro: IPR003870 - InterPro: IPR003615 - SMART: SM00507
Pfam domain/function: PF02720 DUF222
EC number: NA
Molecular weight: Translated: 58935; Mature: 58804
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGALFEPSFAAAHPAGLLRRPVTRTVVLSVAATSIAHMFEISLPDPTELCRSDDGALVA CCCCCCCCCHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHCCCCCEEEH AIEDCARVEAAASARRLSAIAELTGRRTGADQRADWACDFWDCAAAEVAAALTISHGKAS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCC GQMHLSLALNRLPQVAALFLAGHLGARLFSIIAWRTYLVRDPHALSLLDAALAEHAGAWG CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC PLSAPKLEKAIDSWIDRYDPGALRRSRISARTRDLCIGDPDEDAGTAALWGRLYATDAAM CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH LDRRLTEMAHGVCEDDPRTLAQRRADALGALAAGADHLACGCGKPDCPSGAGNDERAAGV HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHEECCCCCCCCCCCCCCCCCCCE VIHVVADASALDAQPDPHLSGDEPPSRPLTPETTLFEALTPDPEPDPPATHAPAELITTG EEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHEECC GGVVPAPLLAELIRGGATISQVRHPGDLAAEPHYRPSAKLAEFVRMRDLTCRFPGCDVPA CCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCEECCCCCCCCH EFCDIDHSAPWPLGPTHPSNLKCACRKHHLLKTFWTGWRDVQLPDGTVIWTAPNGHTYTT HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCEEEE HPGSRIFFPTWHTTTAELPQTSTAAVNVDARGLMMPRRRRTRAAELAHRINAERALNDAY CCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MAERNKPPSF HHHCCCCCCC >Mature Secondary Structure AGALFEPSFAAAHPAGLLRRPVTRTVVLSVAATSIAHMFEISLPDPTELCRSDDGALVA CCCCCCCCHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHCCCCCEEEH AIEDCARVEAAASARRLSAIAELTGRRTGADQRADWACDFWDCAAAEVAAALTISHGKAS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCC GQMHLSLALNRLPQVAALFLAGHLGARLFSIIAWRTYLVRDPHALSLLDAALAEHAGAWG CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC PLSAPKLEKAIDSWIDRYDPGALRRSRISARTRDLCIGDPDEDAGTAALWGRLYATDAAM CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH LDRRLTEMAHGVCEDDPRTLAQRRADALGALAAGADHLACGCGKPDCPSGAGNDERAAGV HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHEECCCCCCCCCCCCCCCCCCCE VIHVVADASALDAQPDPHLSGDEPPSRPLTPETTLFEALTPDPEPDPPATHAPAELITTG EEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHEECC GGVVPAPLLAELIRGGATISQVRHPGDLAAEPHYRPSAKLAEFVRMRDLTCRFPGCDVPA CCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCEECCCCCCCCH EFCDIDHSAPWPLGPTHPSNLKCACRKHHLLKTFWTGWRDVQLPDGTVIWTAPNGHTYTT HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCEEEE HPGSRIFFPTWHTTTAELPQTSTAAVNVDARGLMMPRRRRTRAAELAHRINAERALNDAY CCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MAERNKPPSF HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036