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The map label for this gene is 121637865

Identifier: 121637865

GI number: 121637865

Start: 2206134

End: 2206385

Strand: Reverse

Name: 121637865

Synonym: BCG_1999c

Alternate gene names: NA

Gene position: 2206385-2206134 (Counterclockwise)

Preceding gene: 121637867

Following gene: 121637864

Centisome position: 50.44

GC content: 66.67

Gene sequence:

>252_bases
GTGGGTAAGAACACGTCCTTCGTCCTCGACGAGCACTACAGCGCCTTCATCGACGGCGAGATCGCCGCGGGCCGCTACCG
GTCGGCCAGTGAAGTCATCCGCTCCGCGTTGCGACTGCTCGAGGACCGTGAAACCCAGCTGCGCGCGCTTCGTGAGGCTC
TCGAGGCCGGCGAACGCAGCGGCAGCTCGACACCGTTCGACTTCGACGGATTCCTCGGTCGTAAGCGGGCTGACGCCTCG
CGTGGCCGGTGA

Upstream 100 bases:

>100_bases
CGCCTGGTGCGGCCATGCCGATCCCCAGGAGATTCTGCCGCTGGGGCTTGGGGTGTCCCAGGGGCTAACACCTACTACCA
ACAATTGGTATTGTGCGTTC

Downstream 100 bases:

>100_bases
GTAGCCGATACCTTCTCTCGCCTGCCGCGCAGGCACATCTGGAAGAGATCTGGGACTGCACCTATGACCGTTGGGGTGTC
GATCAGGCCGAGCAGTACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERSGSSTPFDFDGFLGRKRADAS
RGR

Sequences:

>Translated_83_residues
MGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERSGSSTPFDFDGFLGRKRADAS
RGR
>Mature_82_residues
GKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERSGSSTPFDFDGFLGRKRADASR
GR

Specific function: Unknown

COG id: COG3609

COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0156 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1960_MYCTU (P67298)

Other databases:

- EMBL:   BX842578
- EMBL:   AE000516
- PIR:   D70639
- RefSeq:   NP_216476.1
- RefSeq:   NP_336467.1
- EnsemblBacteria:   EBMYCT00000001541
- EnsemblBacteria:   EBMYCT00000071552
- GeneID:   885957
- GeneID:   923513
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT2009
- KEGG:   mtu:Rv1960c
- TIGR:   MT2009
- TubercuList:   Rv1960c
- GeneTree:   EBGT00050000017772
- HOGENOM:   HBG753338
- OMA:   RYKNASE
- ProtClustDB:   CLSK791517
- InterPro:   IPR005360
- InterPro:   IPR010985
- InterPro:   IPR022789
- TIGRFAMs:   TIGR02606

Pfam domain/function: PF03693 RHH_2; SSF47598 Met_repress_like

EC number: NA

Molecular weight: Translated: 9239; Mature: 9108

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS
CCCCCCEEECCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC
GSSTPFDFDGFLGRKRADASRGR
CCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERS
CCCCCEEECCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC
GSSTPFDFDGFLGRKRADASRGR
CCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036