Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637859
Identifier: 121637859
GI number: 121637859
Start: 2203383
End: 2203904
Strand: Reverse
Name: 121637859
Synonym: BCG_1993c
Alternate gene names: NA
Gene position: 2203904-2203383 (Counterclockwise)
Preceding gene: 121637863
Following gene: 121637856
Centisome position: 50.38
GC content: 63.98
Gene sequence:
>522_bases ATGGCGGCTGGATCAGGGGGCGGCACAGTTGGTCTTGTCCTGCCTCGAGTGGCGTCGTTGTCCGGCTTGGACGGGGCTCC GACGGTACCGGAGGGCAGCGACAAAGCACTTATGCACTTGGGCGACCCGCCGAGACGGTGCGACACCCATCCCGACGGCA CAAGCTCAGCCGCGGCCGCTCTTGTTCTTCGTCGGATCGACGTTCACCCACTTCTGACCGGGCTTGGGCGAGGGAGGCAG ACGGTGTCCCTTCGGAACGGTCACCTCGTTGCCACCGCCAACCGGGCGATACTGTCCCGACGTCGGAGCCGGCTTACCCG GGGACGTAGCTTTACGAGCCATCTGATCACCTCCTGTCCCAGACTCGATGACCACCAGCACCGGCATCCCACCCGCTGTC GCGCGGAACACGCCGGGTGTACAGTCGCAACCTGCATCCCCAATGCACGCGACCCTGCCCCTGGCCATCAGACCCCGAGG TGGGGTCCTTTTCGTCTAAAACCAGCTTATACCAGAATATAG
Upstream 100 bases:
>100_bases CACGATCAGCGCGGCCCGGGCCTGATCAGGAAGCTTGTCGAACTCCTTCTTGAATACCGGCCGGCCATCCACAGATGCCC GGAAGAACTTCCAGGTACCC
Downstream 100 bases:
>100_bases GCTGTAACCTATATGCCCAGCTAGGGGCTGCATGATGAGGTTTGTGCCCCGGCGGGCGAACACGAATATGCGCAGCACCT TGTCGTCGAACCAGCGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MAAGSGGGTVGLVLPRVASLSGLDGAPTVPEGSDKALMHLGDPPRRCDTHPDGTSSAAAALVLRRIDVHPLLTGLGRGRQ TVSLRNGHLVATANRAILSRRRSRLTRGRSFTSHLITSCPRLDDHQHRHPTRCRAEHAGCTVATCIPNARDPAPGHQTPR WGPFRLKPAYTRI
Sequences:
>Translated_173_residues MAAGSGGGTVGLVLPRVASLSGLDGAPTVPEGSDKALMHLGDPPRRCDTHPDGTSSAAAALVLRRIDVHPLLTGLGRGRQ TVSLRNGHLVATANRAILSRRRSRLTRGRSFTSHLITSCPRLDDHQHRHPTRCRAEHAGCTVATCIPNARDPAPGHQTPR WGPFRLKPAYTRI >Mature_172_residues AAGSGGGTVGLVLPRVASLSGLDGAPTVPEGSDKALMHLGDPPRRCDTHPDGTSSAAAALVLRRIDVHPLLTGLGRGRQT VSLRNGHLVATANRAILSRRRSRLTRGRSFTSHLITSCPRLDDHQHRHPTRCRAEHAGCTVATCIPNARDPAPGHQTPRW GPFRLKPAYTRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18500; Mature: 18369
Theoretical pI: Translated: 11.96; Mature: 11.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAGSGGGTVGLVLPRVASLSGLDGAPTVPEGSDKALMHLGDPPRRCDTHPDGTSSAAAA CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHCCCCCCCCHHHHHH LVLRRIDVHPLLTGLGRGRQTVSLRNGHLVATANRAILSRRRSRLTRGRSFTSHLITSCP HHHHHHCHHHHHHHCCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHCC RLDDHQHRHPTRCRAEHAGCTVATCIPNARDPAPGHQTPRWGPFRLKPAYTRI CCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEECCHHCCC >Mature Secondary Structure AAGSGGGTVGLVLPRVASLSGLDGAPTVPEGSDKALMHLGDPPRRCDTHPDGTSSAAAA CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHCCCCCCCCHHHHHH LVLRRIDVHPLLTGLGRGRQTVSLRNGHLVATANRAILSRRRSRLTRGRSFTSHLITSCP HHHHHHCHHHHHHHCCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHCC RLDDHQHRHPTRCRAEHAGCTVATCIPNARDPAPGHQTPRWGPFRLKPAYTRI CCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]