Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is glnA3 [H]
Identifier: 121637782
GI number: 121637782
Start: 2128982
End: 2130334
Strand: Direct
Name: glnA3 [H]
Synonym: BCG_1915
Alternate gene names: 121637782
Gene position: 2128982-2130334 (Clockwise)
Preceding gene: 121637781
Following gene: 121637783
Centisome position: 48.67
GC content: 64.75
Gene sequence:
>1353_bases ATGACAGCCACACCGCTTGCCGCGGCCGCGATCGCCCAATTGGAGGCAGAGGGCGTCGACACCGTCATCGGCACCGTCGT GAACCCCGCCGGACTCACCCAGGCCAAGACCGTGCCGATACGCCGGACCAACACATTCGCCAATCCTGGCCTCGGCGCCA GTCCGGTGTGGCATACCTTCTGTATCGACCAATGCAGTATTGCATTCACCGCAGACATCAGTGTGGTCGGCGATCAACGT CTCCGCATCGATCTGTCCGCCTTGCGCATCATCGGCGACGGGTTGGCGTGGGCGCCCGCCGGGTTCTTCGAGCAGGACGG CACACCGGTCCCCGCCTGCAGCCGAGGAACGCTGAGCCGGATCGAGGCCGCGCTTGCTGATGCCGGCATCGACGCGGTAA TCGGCCACGAAGTCGAATTCCTCTTGGTCGACGCGGACGGCCAGCGGCTGCCTTCGACGCTGTGGGCGCAGTACGGTGTC GCCGGGGTGCTCGAGCACGAGGCGTTCGTCCGCGATGTCAACGCCGCGGCAACGGCAGCAGGCATCGCTATCGAGCAGTT CCATCCCGAATACGGTGCCAACCAATTCGAGATCTCGTTAGCGCCGCAGCCGCCGGTCGCGGCCGCCGATCAGCTGGTGC TGACCCGCCTCATCATCGGCCGTACCGCCCGCCGGCACGGGTTACGCGTGAGCCTATCGCCAGCGCCCTTCGCCGGAAGT ATCGGATCCGGTGCCCACCAACACTTCTCGCTGACTATGTCGGAAGGGATGCTGTTCTCCGGTGGGACTGGAGCAGCTGG CATGACCTCGGCCGGGGAGGCCGCGGTGGCAGGAGTGCTTCGCGGACTGCCGGACGCCCAAGGCATCCTGTGCGGATCGA TCGTGTCCGGTCTGCGAATGCGACCCGGTAACTGGGCCGGAATCTATGCATGCTGGGGTACCGAAAACCGGGAAGCGGCG GTGCGATTCGTCAAGGGCGGGGCTGGCAGCGCGTACGGCGGGAACGTGGAGGTGAAGGTCGTCGACCCGTCGGCCAACCC GTATCTCGCGTCGGCGGCGATCCTCGGACTGGCACTCGACGGCATGAAGACCAAGGCGGTGTTGCCGTCGGAAACGACCG TAGACCCGACACAGCTGTCTGACGTGGATCGTGACCGTGCCGGCATTCTGCGACTTGCTGCCGATCAGGCGGATGCAATT GCTGTACTGGATAGTTCGAAACTGCTTCGGTGCATCCTTGGCGATCCCGTGGTAGATGCAGTGGTCGCGGTACGCCAGTT AGAGCATGAGCGCTACGGTGACCTCGATCCTGCGCAGCTGGCCGACAAGTTCCGGATGGCTTGGAGTGTGTAA
Upstream 100 bases:
>100_bases TCTGGGCGACCTGTCGGAATCACGCCAACTCGCGGCTACAACGTAGCGATGCTTGCCGCGCGTAGCCGCGCGAGCTGATC CGCGCTGCAGAATGACTGCC
Downstream 100 bases:
>100_bases CGATGGCCGACTCCGCCGGTTCGGACCTGACGCGGCACACGGCCGAAGTGCCGTTGATCGATCAGCACGTCCACGGATGC TGGCTGACCGAGGGGAACCG
Product: putative glutamine synthetase glnA3
Products: NA
Alternate protein names: Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MTATPLAAAAIAQLEAEGVDTVIGTVVNPAGLTQAKTVPIRRTNTFANPGLGASPVWHTFCIDQCSIAFTADISVVGDQR LRIDLSALRIIGDGLAWAPAGFFEQDGTPVPACSRGTLSRIEAALADAGIDAVIGHEVEFLLVDADGQRLPSTLWAQYGV AGVLEHEAFVRDVNAAATAAGIAIEQFHPEYGANQFEISLAPQPPVAAADQLVLTRLIIGRTARRHGLRVSLSPAPFAGS IGSGAHQHFSLTMSEGMLFSGGTGAAGMTSAGEAAVAGVLRGLPDAQGILCGSIVSGLRMRPGNWAGIYACWGTENREAA VRFVKGGAGSAYGGNVEVKVVDPSANPYLASAAILGLALDGMKTKAVLPSETTVDPTQLSDVDRDRAGILRLAADQADAI AVLDSSKLLRCILGDPVVDAVVAVRQLEHERYGDLDPAQLADKFRMAWSV
Sequences:
>Translated_450_residues MTATPLAAAAIAQLEAEGVDTVIGTVVNPAGLTQAKTVPIRRTNTFANPGLGASPVWHTFCIDQCSIAFTADISVVGDQR LRIDLSALRIIGDGLAWAPAGFFEQDGTPVPACSRGTLSRIEAALADAGIDAVIGHEVEFLLVDADGQRLPSTLWAQYGV AGVLEHEAFVRDVNAAATAAGIAIEQFHPEYGANQFEISLAPQPPVAAADQLVLTRLIIGRTARRHGLRVSLSPAPFAGS IGSGAHQHFSLTMSEGMLFSGGTGAAGMTSAGEAAVAGVLRGLPDAQGILCGSIVSGLRMRPGNWAGIYACWGTENREAA VRFVKGGAGSAYGGNVEVKVVDPSANPYLASAAILGLALDGMKTKAVLPSETTVDPTQLSDVDRDRAGILRLAADQADAI AVLDSSKLLRCILGDPVVDAVVAVRQLEHERYGDLDPAQLADKFRMAWSV >Mature_449_residues TATPLAAAAIAQLEAEGVDTVIGTVVNPAGLTQAKTVPIRRTNTFANPGLGASPVWHTFCIDQCSIAFTADISVVGDQRL RIDLSALRIIGDGLAWAPAGFFEQDGTPVPACSRGTLSRIEAALADAGIDAVIGHEVEFLLVDADGQRLPSTLWAQYGVA GVLEHEAFVRDVNAAATAAGIAIEQFHPEYGANQFEISLAPQPPVAAADQLVLTRLIIGRTARRHGLRVSLSPAPFAGSI GSGAHQHFSLTMSEGMLFSGGTGAAGMTSAGEAAVAGVLRGLPDAQGILCGSIVSGLRMRPGNWAGIYACWGTENREAAV RFVKGGAGSAYGGNVEVKVVDPSANPYLASAAILGLALDGMKTKAVLPSETTVDPTQLSDVDRDRAGILRLAADQADAIA VLDSSKLLRCILGDPVVDAVVAVRQLEHERYGDLDPAQLADKFRMAWSV
Specific function: Unknown
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1790301, Length=256, Percent_Identity=28.90625, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI87081870, Length=341, Percent_Identity=26.9794721407625, Blast_Score=93, Evalue=3e-20,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR004809 - InterPro: IPR001637 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 46721; Mature: 46589
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATPLAAAAIAQLEAEGVDTVIGTVVNPAGLTQAKTVPIRRTNTFANPGLGASPVWHTF CCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEECEEECCCCCCCCCCCCCHHHHH CIDQCSIAFTADISVVGDQRLRIDLSALRIIGDGLAWAPAGFFEQDGTPVPACSRGTLSR HHHCCCEEEEEEEEEECCCEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH IEAALADAGIDAVIGHEVEFLLVDADGQRLPSTLWAQYGVAGVLEHEAFVRDVNAAATAA HHHHHHHCCCCEEECCCEEEEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH GIAIEQFHPEYGANQFEISLAPQPPVAAADQLVLTRLIIGRTARRHGLRVSLSPAPFAGS HEEHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC IGSGAHQHFSLTMSEGMLFSGGTGAAGMTSAGEAAVAGVLRGLPDAQGILCGSIVSGLRM CCCCCCEEEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCC RPGNWAGIYACWGTENREAAVRFVKGGAGSAYGGNVEVKVVDPSANPYLASAAILGLALD CCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHC GMKTKAVLPSETTVDPTQLSDVDRDRAGILRLAADQADAIAVLDSSKLLRCILGDPVVDA CCCCEEECCCCCCCCCHHHCCCCCCHHCEEEEECCCCCEEEEECCHHHHHHHHCCHHHHH VVAVRQLEHERYGDLDPAQLADKFRMAWSV HHHHHHHHHHHCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure TATPLAAAAIAQLEAEGVDTVIGTVVNPAGLTQAKTVPIRRTNTFANPGLGASPVWHTF CCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEECEEECCCCCCCCCCCCCHHHHH CIDQCSIAFTADISVVGDQRLRIDLSALRIIGDGLAWAPAGFFEQDGTPVPACSRGTLSR HHHCCCEEEEEEEEEECCCEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH IEAALADAGIDAVIGHEVEFLLVDADGQRLPSTLWAQYGVAGVLEHEAFVRDVNAAATAA HHHHHHHCCCCEEECCCEEEEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH GIAIEQFHPEYGANQFEISLAPQPPVAAADQLVLTRLIIGRTARRHGLRVSLSPAPFAGS HEEHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC IGSGAHQHFSLTMSEGMLFSGGTGAAGMTSAGEAAVAGVLRGLPDAQGILCGSIVSGLRM CCCCCCEEEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCC RPGNWAGIYACWGTENREAAVRFVKGGAGSAYGGNVEVKVVDPSANPYLASAAILGLALD CCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHC GMKTKAVLPSETTVDPTQLSDVDRDRAGILRLAADQADAIAVLDSSKLLRCILGDPVVDA CCCCEEECCCCCCCCCHHHCCCCCCHHCEEEEECCCCCEEEEECCHHHHHHHHCCHHHHH VVAVRQLEHERYGDLDPAQLADKFRMAWSV HHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2572584 [H]