Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is yebQ [C]
Identifier: 121637780
GI number: 121637780
Start: 2126863
End: 2128398
Strand: Direct
Name: yebQ [C]
Synonym: BCG_1913
Alternate gene names: 121637780
Gene position: 2126863-2128398 (Clockwise)
Preceding gene: 121637779
Following gene: 121637781
Centisome position: 48.62
GC content: 64.91
Gene sequence:
>1536_bases ATGGCGGGCCCCACAGCACCGACCACTGCCCCCACCGCAATCCGAGCCGGTGGCCCGCTGCTCAGTCCGGTGCGACGCAA CATTATTTTCACCGCACTTGTGTTCGGGGTGCTGGTCGCTGCGACCGGCCAAACCATCGTTGTGCCCGCATTGCCGACGA TCGTCGCCGAGCTGGGCAGCACCGTTGACCAGTCGTGGGCGGTCACCAGCTATCTGCTGGGGGGAACTGTCGTGGTTGTG GTGGCTGGCAAGCTCGGTGATCTGCTCGGCCGCAACAGGGTGCTGCTAGGCTCCGTCGTGGTCTTCGTCGTTGGCTCTGT GCTGTGCGGGTTATCGCAGACGATGACCATGCTGGCGATCTCTCGCGCACTGCAGGGCGTCGGTGCCGGTGCGATTTCCG TCACCGCCTACGCGCTGGCCGCTGAGGTGGTCCCACTGCGGGACCGTGGCCGCTACCAGGGCGTCTTAGGTGCGGTGTTC GGTGTCAACACGGTCACCGGTCCGCTGCTGGGGGGCTGGCTCACCGACTATCTGAGCTGGCGGTGGGCGTTTTGGATCAA CGTGCCGGTTTCGATCGCGGTGCTGACAGTGGCGGCAACCGCCGTCCCTGCGTTGGCCCGACCGCCCAAACCGGTCATCG ACTACCTTGGGATCCTGGTCATCGCTGTGGCCACGACCGCTTTGATCATGGCCACAAGTTGGGGCGGAACCACCTACGCC TGGGGCTCAGCGACCATTGTCGGGCTGTTGATCGGGGCCGCAGTGGCGCTGGGTTTCTTCGTGTGGCTGGAGGGCCGCGC CCGCTGCGGCCATCCTGCCGCCCAGGCTGTTTGGCAGCCCAGTATTTGCCGTGTGCTGCGTCCTGTCCTTCGTGGTCGGA TTCGCGATGCTGGGTGCACTGACCTTCGTACCGATCTATCTGGGGTACGTGGACGGCGCGTCGGCGACCGCGTCAGGTCT GCGCACGTTGCCGATGGTGATCGGCCTGCTGATCGCCTCGACCGGGACGGGTGTCCTGGTCGGCCGGACGGGCCGCTACA AGATCTTCCCGGTCGCGGGGATGGCGCTGATGGCGGTTGCGTTCCTGCTGATGTCGCAGATGGACGAGTGGACGCCACCG CTGCTGCAATCGCTGTACCTGGTCGTCCTAGGTGCCGGCATCGGATTGTCCATGCAGGTGCTCGTTCTCATCGTGCAGAA CACGTCGTCTTTCGAAGACCTCGGCGTCGCAACATCGGGTGTGACCTTCTTCCGGGTGGTCGGCGCCTCGTTTGGTACCG CAACATTCGGTGCGTTGTTCGTAAACTTCCTGGACCGAAGACTCGGTTCCGCGCTGACGTCGGGCGCCGTGCCTGTCCCG GCAGTGCCATCTCCGGCTGTCTTGCATCAGCTGCCCCAGAGCATGGCCGCCCCGATCGTGCGGGCATATGCCGAGTCGCT CACCCAGGTGTTCCTTTGCGCGGTCTCGGTCACGGTGGTCGGTTTCATCCTGGCGCTGTTGCTGCGAGAGGTACCGCTCA CCGACATCCACGATGA
Upstream 100 bases:
>100_bases TCGCCCACCGACCTGATGCCCGCTTGAGGATTCTCCGATACCACTCCGGGCGCCGCTGATAAGCTCTAGCATCGACTCGA ACAGCGATGGGAGGGCGGAT
Downstream 100 bases:
>100_bases CGCCGACGACCTCGGCGACGGGTTCGGTGTGCCCAGAGCCGAATCGCCGGAGGATGTGTTGGAAATCGCGGTTCGGCGTA TGCTGCCGAACGGGGTGCGA
Product: putative integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 511; Mature: 510
Protein sequence:
>511_residues MAGPTAPTTAPTAIRAGGPLLSPVRRNIIFTALVFGVLVAATGQTIVVPALPTIVAELGSTVDQSWAVTSYLLGGTVVVV VAGKLGDLLGRNRVLLGSVVVFVVGSVLCGLSQTMTMLAISRALQGVGAGAISVTAYALAAEVVPLRDRGRYQGVLGAVF GVNTVTGPLLGGWLTDYLSWRWAFWINVPVSIAVLTVAATAVPALARPPKPVIDYLGILVIAVATTALIMATSWGGTTYA WGSATIVGLLIGAAVALGFFVWLEGRARCGHPAAQAVWQPSICRVLRPVLRGRIRDAGCTDLRTDLSGVRGRRVGDRVRS AHVADGDRPADRLDRDGCPGRPDGPLQDLPGRGDGADGGCVPADVADGRVDATAAAIAVPGRPRCRHRIVHAGARSHRAE HVVFRRPRRRNIGCDLLPGGRRLVWYRNIRCVVRKLPGPKTRFRADVGRRACPGSAISGCLASAAPEHGRPDRAGICRVA HPGVPLRGLGHGGRFHPGAVAARGTAHRHPR
Sequences:
>Translated_511_residues MAGPTAPTTAPTAIRAGGPLLSPVRRNIIFTALVFGVLVAATGQTIVVPALPTIVAELGSTVDQSWAVTSYLLGGTVVVV VAGKLGDLLGRNRVLLGSVVVFVVGSVLCGLSQTMTMLAISRALQGVGAGAISVTAYALAAEVVPLRDRGRYQGVLGAVF GVNTVTGPLLGGWLTDYLSWRWAFWINVPVSIAVLTVAATAVPALARPPKPVIDYLGILVIAVATTALIMATSWGGTTYA WGSATIVGLLIGAAVALGFFVWLEGRARCGHPAAQAVWQPSICRVLRPVLRGRIRDAGCTDLRTDLSGVRGRRVGDRVRS AHVADGDRPADRLDRDGCPGRPDGPLQDLPGRGDGADGGCVPADVADGRVDATAAAIAVPGRPRCRHRIVHAGARSHRAE HVVFRRPRRRNIGCDLLPGGRRLVWYRNIRCVVRKLPGPKTRFRADVGRRACPGSAISGCLASAAPEHGRPDRAGICRVA HPGVPLRGLGHGGRFHPGAVAARGTAHRHPR >Mature_510_residues AGPTAPTTAPTAIRAGGPLLSPVRRNIIFTALVFGVLVAATGQTIVVPALPTIVAELGSTVDQSWAVTSYLLGGTVVVVV AGKLGDLLGRNRVLLGSVVVFVVGSVLCGLSQTMTMLAISRALQGVGAGAISVTAYALAAEVVPLRDRGRYQGVLGAVFG VNTVTGPLLGGWLTDYLSWRWAFWINVPVSIAVLTVAATAVPALARPPKPVIDYLGILVIAVATTALIMATSWGGTTYAW GSATIVGLLIGAAVALGFFVWLEGRARCGHPAAQAVWQPSICRVLRPVLRGRIRDAGCTDLRTDLSGVRGRRVGDRVRSA HVADGDRPADRLDRDGCPGRPDGPLQDLPGRGDGADGGCVPADVADGRVDATAAAIAVPGRPRCRHRIVHAGARSHRAEH VVFRRPRRRNIGCDLLPGGRRLVWYRNIRCVVRKLPGPKTRFRADVGRRACPGSAISGCLASAAPEHGRPDRAGICRVAH PGVPLRGLGHGGRFHPGAVAARGTAHRHPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=213, Percent_Identity=32.3943661971831, Blast_Score=95, Evalue=9e-21, Organism=Escherichia coli, GI1789042, Length=236, Percent_Identity=28.3898305084746, Blast_Score=89, Evalue=8e-19, Organism=Escherichia coli, GI1788710, Length=182, Percent_Identity=31.3186813186813, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1790146, Length=176, Percent_Identity=30.6818181818182, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790195, Length=174, Percent_Identity=32.183908045977, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1788392, Length=201, Percent_Identity=31.8407960199005, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1788509, Length=141, Percent_Identity=31.2056737588652, Blast_Score=69, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6325455, Length=234, Percent_Identity=26.4957264957265, Blast_Score=90, Evalue=7e-19, Organism=Saccharomyces cerevisiae, GI6322958, Length=248, Percent_Identity=22.5806451612903, Blast_Score=88, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6323735, Length=183, Percent_Identity=30.6010928961749, Blast_Score=88, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6321663, Length=145, Percent_Identity=29.6551724137931, Blast_Score=87, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6319770, Length=216, Percent_Identity=27.7777777777778, Blast_Score=77, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001958 - InterPro: IPR011991 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 53430; Mature: 53299
Theoretical pI: Translated: 11.79; Mature: 11.79
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGPTAPTTAPTAIRAGGPLLSPVRRNIIFTALVFGVLVAATGQTIVVPALPTIVAELGS CCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCC TVDQSWAVTSYLLGGTVVVVVAGKLGDLLGRNRVLLGSVVVFVVGSVLCGLSQTMTMLAI HHHHHHHHHHHHHCCEEEEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SRALQGVGAGAISVTAYALAAEVVPLRDRGRYQGVLGAVFGVNTVTGPLLGGWLTDYLSW HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCE RWAFWINVPVSIAVLTVAATAVPALARPPKPVIDYLGILVIAVATTALIMATSWGGTTYA EEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCEEE WGSATIVGLLIGAAVALGFFVWLEGRARCGHPAAQAVWQPSICRVLRPVLRGRIRDAGCT CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCH DLRTDLSGVRGRRVGDRVRSAHVADGDRPADRLDRDGCPGRPDGPLQDLPGRGDGADGGC HHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCC VPADVADGRVDATAAAIAVPGRPRCRHRIVHAGARSHRAEHVVFRRPRRRNIGCDLLPGG CCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCHHHCCHHHHHHCCCCCCCCCCEECCCC RRLVWYRNIRCVVRKLPGPKTRFRADVGRRACPGSAISGCLASAAPEHGRPDRAGICRVA CEEEEEHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEC HPGVPLRGLGHGGRFHPGAVAARGTAHRHPR CCCCCCCCCCCCCCCCCCCCEECCCCCCCCC >Mature Secondary Structure AGPTAPTTAPTAIRAGGPLLSPVRRNIIFTALVFGVLVAATGQTIVVPALPTIVAELGS CCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCC TVDQSWAVTSYLLGGTVVVVVAGKLGDLLGRNRVLLGSVVVFVVGSVLCGLSQTMTMLAI HHHHHHHHHHHHHCCEEEEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SRALQGVGAGAISVTAYALAAEVVPLRDRGRYQGVLGAVFGVNTVTGPLLGGWLTDYLSW HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCE RWAFWINVPVSIAVLTVAATAVPALARPPKPVIDYLGILVIAVATTALIMATSWGGTTYA EEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCEEE WGSATIVGLLIGAAVALGFFVWLEGRARCGHPAAQAVWQPSICRVLRPVLRGRIRDAGCT CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCH DLRTDLSGVRGRRVGDRVRSAHVADGDRPADRLDRDGCPGRPDGPLQDLPGRGDGADGGC HHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCC VPADVADGRVDATAAAIAVPGRPRCRHRIVHAGARSHRAEHVVFRRPRRRNIGCDLLPGG CCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCHHHCCHHHHHHCCCCCCCCCCEECCCC RRLVWYRNIRCVVRKLPGPKTRFRADVGRRACPGSAISGCLASAAPEHGRPDRAGICRVA CEEEEEHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEC HPGVPLRGLGHGGRFHPGAVAARGTAHRHPR CCCCCCCCCCCCCCCCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]