Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is bfrA
Identifier: 121637779
GI number: 121637779
Start: 2126299
End: 2126778
Strand: Direct
Name: bfrA
Synonym: BCG_1912
Alternate gene names: 121637779
Gene position: 2126299-2126778 (Clockwise)
Preceding gene: 121637778
Following gene: 121637780
Centisome position: 48.61
GC content: 56.67
Gene sequence:
>480_bases ATGCAAGGTGATCCCGATGTTCTGCGCCTGCTCAACGAACAATTGACCAGCGAGCTCACCGCTATCAACCAATACTTTCT GCACTCCAAGATGCAGGACAACTGGGGTTTTACCGAGCTGGCGGCCCACACCCGCGCGGAGTCGTTCGACGAAATGCGGC ACGCCGAGGAAATCACCGATCGCATCTTGTTGCTGGATGGTTTGCCGAACTACCAGCGCATCGGTTCGTTGCGTATCGGC CAGACGCTCCGCGAGCAATTTGAGGCCGATCTGGCGATCGAATACGACGTGTTGAATCGTCTCAAGCCAGGAATCGTCAT GTGCCGGGAGAAACAGGACACCACCAGCGCCGTACTGCTGGAGAAAATCGTTGCCGACGAGGAAGAACACATCGACTACT TGGAAACGCAGCTGGAGCTGATGGACAAGCTAGGAGAGGAGCTTTACTCGGCGCAGTGCGTCTCTCGCCCACCGACCTGA
Upstream 100 bases:
>100_bases GTGCTGTTATCAGCCCAAGACGAGCCCGACACCGGTGCGCTCCAGCCCTGCCCACCTGGCGCGGTTCGCCACGACAGCCT TATATCCCATAGGAGTGGTC
Downstream 100 bases:
>100_bases TGCCCGCTTGAGGATTCTCCGATACCACTCCGGGCGCCGCTGATAAGCTCTAGCATCGACTCGAACAGCGATGGGAGGGC GGATATGGCGGGCCCCACAG
Product: putative bacterioferritin bfrA
Products: NA
Alternate protein names: BFR
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MQGDPDVLRLLNEQLTSELTAINQYFLHSKMQDNWGFTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLRIG QTLREQFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEKIVADEEEHIDYLETQLELMDKLGEELYSAQCVSRPPT
Sequences:
>Translated_159_residues MQGDPDVLRLLNEQLTSELTAINQYFLHSKMQDNWGFTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLRIG QTLREQFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEKIVADEEEHIDYLETQLELMDKLGEELYSAQCVSRPPT >Mature_159_residues MQGDPDVLRLLNEQLTSELTAINQYFLHSKMQDNWGFTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLRIG QTLREQFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEKIVADEEEHIDYLETQLELMDKLGEELYSAQCVSRPPT
Specific function: May perform analogous functions in iron detoxification and storage to that of animal ferritins
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain
Homologues:
Organism=Escherichia coli, GI1789733, Length=149, Percent_Identity=44.9664429530201, Blast_Score=129, Evalue=8e-32,
Paralogues:
None
Copy number: 1639 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): BFR_MYCBO (P63698)
Other databases:
- EMBL: BX248340 - RefSeq: NP_855559.1 - ProteinModelPortal: P63698 - SMR: P63698 - EnsemblBacteria: EBMYCT00000016741 - GeneID: 1093043 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb1907 - GeneTree: EBGT00050000018263 - HOGENOM: HBG288894 - OMA: FLDGFPN - ProtClustDB: CLSK791451 - BioCyc: MBOV233413:MB1907-MONOMER - InterPro: IPR002024 - InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - Gene3D: G3DSA:1.20.1260.10 - PIRSF: PIRSF002560 - PRINTS: PR00601 - TIGRFAMs: TIGR00754
Pfam domain/function: PF00210 Ferritin; SSF47240 Ferritin/RR_like
EC number: NA
Molecular weight: Translated: 18341; Mature: 18341
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: PS00549 BACTERIOFERRITIN; PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGDPDVLRLLNEQLTSELTAINQYFLHSKMQDNWGFTELAAHTRAESFDEMRHAEEITD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RILLLDGLPNYQRIGSLRIGQTLREQFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVLL HHHHHCCCCCHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEECCCCCHHHHHHH EKIVADEEEHIDYLETQLELMDKLGEELYSAQCVSRPPT HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQGDPDVLRLLNEQLTSELTAINQYFLHSKMQDNWGFTELAAHTRAESFDEMRHAEEITD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RILLLDGLPNYQRIGSLRIGQTLREQFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVLL HHHHHCCCCCHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEECCCCCHHHHHHH EKIVADEEEHIDYLETQLELMDKLGEELYSAQCVSRPPT HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972