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The map label for this gene is yfdE [H]

Identifier: 121637769

GI number: 121637769

Start: 2114099

End: 2116435

Strand: Direct

Name: yfdE [H]

Synonym: BCG_1902

Alternate gene names: 121637769

Gene position: 2114099-2116435 (Clockwise)

Preceding gene: 121637765

Following gene: 121637770

Centisome position: 48.33

GC content: 66.8

Gene sequence:

>2337_bases
ATGGTGACACGACTGCTCGCCGACCTGGGCGCAGACGTTCTCAAGGTGCAACCCCCCGGCGGCAGCCCAGGACGCCACGT
GCGGCCCACGCTGGCCGGCACCAGCATCGGGTTCGCCATGCACAACGCGAACAAACGCAGCGCAGTGCTCAACCCGCTCG
ACGAGAGCGACCGTCGGCGGTTCTTGGACCTCGCCGCCAGCGCCGACATCGTCGTCGACTGTGGTCTTCCGGGACAGGCC
GCCGCGTACGGGGCATCGTGTGCCGAGTTGGCCGATCGCTACCGACACCTGGTGGCGCTGTCGATCACCGACTTTGGCGC
TGCCGGTCCGCGGTCGTCATGGCGCGCGACCGATCCGGTGCTGTACGCGATGAGTGGTGCTCTCTCGCGGTCGGGCCCTA
CCGCCGGCACGCCGGTACTGCCGCCGGACGGTATCGCTTCGGCAACCGCAGCGGTGCAGGCAGCCTGGGCCGTACTGGTC
GCCTATTTCAACCGATTACGTTGTGGTACTGGGGATTACATCGACTTCTCCCGGTTTGACGCCGTCGTTATGGCGTTGGA
TCCCCCCTTCGGGGCGCACGGGCAGGTCGCAGCCGGCATCCGCAGCACCGGGCGATGGCGGGGACGGCCCAAGAACCAGG
ACGCTTACCCGATTTATCCGTGCCGGGACGGCTACGTACGGTTCTGCGTGATGGCGCCGCGGCAGTGGCGCGGGCTGCGC
CGCTGGTTGGGGGAGCCCGAAGATTTTCAGGACCCCAAGTACGACGTGATCGGCGCACGTTTGGCCGCATGGCCGCAGAT
CAGCGTGTTGGTCGCGAAGTTGTGCGCCGAGAAGACCATGAAGGAGTTGGTGGCAGCCGGCCAAGCGCTCGGGGTTCCCA
TTACCGCGGTGCTGACACCGTCGAGAATCCTGGCCTCCGAACACTTCCAGGCGGTGGGTGCGATCACCGATGCCGAGCTC
GTTCCGGGGGTGCGCACCGGGGTGCCTACCGGATACTTCGTTGTCGACGGGAAGCGCGCCGGTTTCCGTACTCCGGCCCC
CGCCGCGGGGCAGGACGAACCGCGCTGGCTCGCGGATCCAGCGCCGGTGCCCCCACCCTCAGGCCGGGTCGGCGGCTATC
CATTCGAAGGTCTGCGGATTCTTGATCTGGGCATCATCGTGGCCGGCGGCGAGCTCAGCCGGCTGTTCGGCGACTTGGGC
GCCGAGGTCATCAAGGTCGAAAGTGCCGACCACCCCGACGGGTTGCGGCAGACCCGAGTCGGGGATGCGATGAGTGAATC
ATTCGCGTGGACCCATCGCAATCACCTCGCGCTGGGCCTGGACCTGCGCAACAGCGAGGGCAAAGCGATCTTCGGTCGCC
TGGTCGCTGAATCCGACGCGGTGTTCGCCAACTTCAAACCGGGAACCCTTACCTCACTTGGGTTTTCCTACGATGTACTG
CACGCCTTCAACCCCCGGATCGTGCTCGCCGGGAGTAGTGCATTCGGGAACCGAGGGCCGTGGAGCACCCGGATGGGCTA
CGGGCCACTGGTGCGCGCCGCCACCGGGGTCACCCGTGTTTGGACATCCGATGAGGCGCAGCCGGACAACTCTCGGCACC
CCTTCTACGACGCGACGACGATCTTCCCCGACCACGTTGTCGGGCGGGTCGGTGCCCTGCTCGCGCTGGCGGCCCTGATC
CACCGCGATCGAACTGGCGGCGGAGCCCACGTCCACATCTCCCAGGCCGAAGTCGTCGTCAATCAGCTAGACACCATGTT
CGTTGCCGAGGCCGCCCGAGCGACCGACGTTGCCGAGATCCACCCGGACACCAGTGTGCATGCGGTCTACCCTTGTGCTG
GCGACGACGAATGGTGCGTCATCTCAATCCGCTCCGACGATGAATGGCGTCGCGCGACATCTGTTTTCGGCCAGCCTGAA
TTGGCGAACGACCCACGCTTCGGGGCAAGCCGGTCACGCGTGGCCAACCGTTCGGAGTTGGTGGCCGCAGTGTCGGCCTG
GACCAGCACCCGTACCCCGGTGCAAGCGGCCGGCGCGCTGCAGGCGGCCGGAGTTGCGGCCGGCCCGATGAATCGCCCGT
CGGATATCCTCGAGGATCCCCAGCTGATCGAGCGAAACCTGTTCCGCGACATGGTGCATCCGCTGATCGCCCGTCCGCTG
CCCGCCGAGACGGGTCCGGCTCCGTTTCGTCACATTCCGCAGGCACCCCAACGCCCGGCGCCGCTGCCCGGACAGGACAG
CGTTCAGATCTGCCGCAAGCTGCTCGGCATGACCGCGGACGAGACCGAACGCCTAATCAACGAGCGCGTAATGTTCGGGC
CGGCCGTCACTGCCTAA

Upstream 100 bases:

>100_bases
ACGCCGATGAAACAGCTACGGTGTGCACGTGCCCGAACGATTGCTCGATGCCGTGCGTGTGCTCGACTTGTCCGACGGCT
GTTCTGCTGGAGGCACCGAT

Downstream 100 bases:

>100_bases
GTGGTCTCGCCGGTGTCGTTCGTCGACGGTCGGCTGATTGCCCTTCCGGCTCCGAGATCGACGTTTTGCCCGCCTGTTCG
TGCTTTATCTGCGAAGCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 778; Mature: 778

Protein sequence:

>778_residues
MVTRLLADLGADVLKVQPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRFLDLAASADIVVDCGLPGQA
AAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVLYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLV
AYFNRLRCGTGDYIDFSRFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR
RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTPSRILASEHFQAVGAITDAEL
VPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADPAPVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLG
AEVIKVESADHPDGLRQTRVGDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL
HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATTIFPDHVVGRVGALLALAALI
HRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEIHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPE
LANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPL
PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA

Sequences:

>Translated_778_residues
MVTRLLADLGADVLKVQPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRFLDLAASADIVVDCGLPGQA
AAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVLYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLV
AYFNRLRCGTGDYIDFSRFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR
RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTPSRILASEHFQAVGAITDAEL
VPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADPAPVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLG
AEVIKVESADHPDGLRQTRVGDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL
HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATTIFPDHVVGRVGALLALAALI
HRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEIHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPE
LANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPL
PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA
>Mature_778_residues
MVTRLLADLGADVLKVQPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRRFLDLAASADIVVDCGLPGQA
AAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVLYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLV
AYFNRLRCGTGDYIDFSRFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR
RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTPSRILASEHFQAVGAITDAEL
VPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADPAPVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLG
AEVIKVESADHPDGLRQTRVGDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL
HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATTIFPDHVVGRVGALLALAALI
HRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEIHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPE
LANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPL
PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=389, Percent_Identity=24.9357326478149, Blast_Score=136, Evalue=6e-32,
Organism=Homo sapiens, GI300863124, Length=416, Percent_Identity=23.5576923076923, Blast_Score=122, Evalue=1e-27,
Organism=Homo sapiens, GI300863126, Length=150, Percent_Identity=32.6666666666667, Blast_Score=84, Evalue=5e-16,
Organism=Escherichia coli, GI87082093, Length=351, Percent_Identity=26.7806267806268, Blast_Score=131, Evalue=2e-31,
Organism=Escherichia coli, GI1788717, Length=415, Percent_Identity=23.1325301204819, Blast_Score=102, Evalue=8e-23,
Organism=Escherichia coli, GI1786222, Length=408, Percent_Identity=22.3039215686275, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24648431, Length=408, Percent_Identity=25, Blast_Score=130, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 83182; Mature: 83182

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTRLLADLGADVLKVQPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR
CHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHCCCCCHHHHHH
FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV
HHHHHCCCCEEEECCCCCCHHHHCCHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCH
LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHC
AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR
EEEEEECCCCCCCCCCHHCHHCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCHHHHHHH
RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP
HHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP
HHHHHHHHHHHHHCCCCHHHCCCHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV
CCCCCCCCCCCCCCCCCEEEEEEEEEEECCHHHHHHHHHCCEEEEEECCCCCCCHHHHHH
GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL
HHHHHHHHCEECCCEEEEEEEEECCCCCEEHHHHHHCCCCEEEECCCCCEECCCCCCHHH
HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT
HHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCC
IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCHHHC
HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL
CCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHCCHHHH
VAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPL
HHHHHHHCCCCCCHHHHCCHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCC
PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA
CCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVTRLLADLGADVLKVQPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLDESDRRR
CHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHCCCCCHHHHHH
FLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPV
HHHHHCCCCEEEECCCCCCHHHHCCHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCH
LYAMSGALSRSGPTAGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFD
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHC
AVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLR
EEEEEECCCCCCCCCCHHCHHCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCHHHHHHH
RWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP
HHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADP
HHHHHHHHHHHHHCCCCHHHCCCHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
APVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRV
CCCCCCCCCCCCCCCCCEEEEEEEEEEECCHHHHHHHHHCCEEEEEECCCCCCCHHHHHH
GDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRLVAESDAVFANFKPGTLTSLGFSYDVL
HHHHHHHHCEECCCEEEEEEEEECCCCCEEHHHHHHCCCCEEEECCCCCEECCCCCCHHH
HAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATT
HHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCC
IFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEI
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCHHHC
HPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSEL
CCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHCCHHHH
VAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPL
HHHHHHHCCCCCCHHHHCCHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCC
PAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA
CCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]