Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is eccB5 [H]
Identifier: 121637684
GI number: 121637684
Start: 2018745
End: 2020265
Strand: Direct
Name: eccB5 [H]
Synonym: BCG_1815
Alternate gene names: 121637684
Gene position: 2018745-2020265 (Clockwise)
Preceding gene: 121637682
Following gene: 121637685
Centisome position: 46.15
GC content: 65.09
Gene sequence:
>1521_bases GTGGCTGAAGAGAGCCGCGGGCAGCGGGGGTCGGGGTATGGCCTTGGGTTGTCCACGCGGACCCAGGTAACCGGTTATCA GTTCCTGGCGCGTCGAACCGCAATGGCGTTGACACGCTGGCATGTGCGTATGGAGATTGAGCCGGGTCGGCGGCAGACGT TGGCGGTGGTGGCGTCGGTGTCGGCGGCGTTGGTGATCTGTCTGGGGGCGCTGTTGTGGTCGTTCATCAGCCCGTCCGGC CAGTTGAATGAGTCGCCGATCATCGCAGACCGCGATTCCGGTGCGCTCTATGTCCGTGTCGGTGACAGGTTGTACCCGGC GCTGAATTTGGCATCGGCACGGCTGATCACCGGGCGGCCGGACAACCCGCACCTGGTTCGGTCAAGCCAGATTGCCACCA TGCCGCGCGGTCCGCTGGTGGGTATCCCGGGTGCGCCGTCATCGTTCTCGCCAAAGAGTCCACCCGCGTCGTCTTGGCTG GTCTGCGACACGGTAGCGACCTCGTCAAGCATCGGGTCGCTGCAAGGCGTGACGGTGACGGTCATCGACGGGACCCCGGA CCTTACCGGTCACCGGCAGATTTTGAGTGGATCGGACGCGGTAGTGCTGCGCTACGGCGGAGATGCGTGGGTCATCCGGG AGGGGCGCCGGTCACGAATCGAGCCGACGAATCGAGCGGTGTTGTTGCCGCTGGGGTTGACGCCGGAGCAGGTTAGCCAG GCGCGTCCGATGAGCCGGGCATTGTTCGACGCTTTGCCGGTCGGGCCCGAACTGTTGGTGCCGGAAGTGCCGAATGCGGG TGGTCCTGCGACGTTCCCGGGCGCTCCCGGACCGATCGGGACGGTAATCGTCACACCGCAAATCAGTGGACCACAACAGT ATTCGTTGGTCCTGGGCGATGGAGTGCAAACGCTCCCGCCGTTGGTGGCCCAGATCCTGCAGAACGCTGGTAGTGCGGGC AACACCAAGCCGTTGACCGTGGAACCCTCAACGCTGGCCAAGATGCCGGTGGTGAATCGGTTGGATCTCTCTGCGTATCC GGACAATCCCCTGGAAGTGGTGGACATTCGCGAGCATCCGTCGACCTGTTGGTGGTGGGAGCGGACGGCCGGTGAAAACC GGGCCCGTGTGCGGGTCGTGTCCGGGCCTACCATTCCGGTCGCGGCGACCGAGATGAACAAGGTGGTGTCGTTGGTGAAG GCCGACACGAGTGGCCGCCAAGCCGATCAGGTCTACTTCGGCCCCGACCATGCGAACTTCGTGGCCGTCACCGGCAACAA CCCGGGGGCCCAAACGTCCGAATCGCTATGGTGGGTGACCGATGCGGGCGCGCGGTTCGGGGTGGAGGACAGCAAAGAAG CGCGTGACGCGTTGGGGTTGACCCTGACGCCGAGCCTGGCGCCGTGGGTGGCGCTGCGGCTGCTGCCACAGGGCCCCACG CTGTCACGAGCGGACGCGTTGGTGGAGCACGACACGCTCCCAATGGACATGACCCCGGCAGAGTTGGTGGTACCGAAATG A
Upstream 100 bases:
>100_bases ATGCCCAGTGAAGACACGACGAATCCTTGGGGGATCCGCGCAGTGGCAAATACCCAGGTCAATGTCCAGGTGTTCTGAGC AGACCGGAAGGTGATCTAGC
Downstream 100 bases:
>100_bases AGCGTGGTTTTGCCCGCCCGACACCGGAAAAGCCTCCGGTCATCAAGCCCGAGAATATTGTCCTATCGACACCGCTGAGC ATTCCGCCGCCGGAGGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: ESX conserved component B5; Type VII secretion system protein eccB5; T7SS protein eccB5 [H]
Number of amino acids: Translated: 506; Mature: 505
Protein sequence:
>506_residues MAEESRGQRGSGYGLGLSTRTQVTGYQFLARRTAMALTRWHVRMEIEPGRRQTLAVVASVSAALVICLGALLWSFISPSG QLNESPIIADRDSGALYVRVGDRLYPALNLASARLITGRPDNPHLVRSSQIATMPRGPLVGIPGAPSSFSPKSPPASSWL VCDTVATSSSIGSLQGVTVTVIDGTPDLTGHRQILSGSDAVVLRYGGDAWVIREGRRSRIEPTNRAVLLPLGLTPEQVSQ ARPMSRALFDALPVGPELLVPEVPNAGGPATFPGAPGPIGTVIVTPQISGPQQYSLVLGDGVQTLPPLVAQILQNAGSAG NTKPLTVEPSTLAKMPVVNRLDLSAYPDNPLEVVDIREHPSTCWWWERTAGENRARVRVVSGPTIPVAATEMNKVVSLVK ADTSGRQADQVYFGPDHANFVAVTGNNPGAQTSESLWWVTDAGARFGVEDSKEARDALGLTLTPSLAPWVALRLLPQGPT LSRADALVEHDTLPMDMTPAELVVPK
Sequences:
>Translated_506_residues MAEESRGQRGSGYGLGLSTRTQVTGYQFLARRTAMALTRWHVRMEIEPGRRQTLAVVASVSAALVICLGALLWSFISPSG QLNESPIIADRDSGALYVRVGDRLYPALNLASARLITGRPDNPHLVRSSQIATMPRGPLVGIPGAPSSFSPKSPPASSWL VCDTVATSSSIGSLQGVTVTVIDGTPDLTGHRQILSGSDAVVLRYGGDAWVIREGRRSRIEPTNRAVLLPLGLTPEQVSQ ARPMSRALFDALPVGPELLVPEVPNAGGPATFPGAPGPIGTVIVTPQISGPQQYSLVLGDGVQTLPPLVAQILQNAGSAG NTKPLTVEPSTLAKMPVVNRLDLSAYPDNPLEVVDIREHPSTCWWWERTAGENRARVRVVSGPTIPVAATEMNKVVSLVK ADTSGRQADQVYFGPDHANFVAVTGNNPGAQTSESLWWVTDAGARFGVEDSKEARDALGLTLTPSLAPWVALRLLPQGPT LSRADALVEHDTLPMDMTPAELVVPK >Mature_505_residues AEESRGQRGSGYGLGLSTRTQVTGYQFLARRTAMALTRWHVRMEIEPGRRQTLAVVASVSAALVICLGALLWSFISPSGQ LNESPIIADRDSGALYVRVGDRLYPALNLASARLITGRPDNPHLVRSSQIATMPRGPLVGIPGAPSSFSPKSPPASSWLV CDTVATSSSIGSLQGVTVTVIDGTPDLTGHRQILSGSDAVVLRYGGDAWVIREGRRSRIEPTNRAVLLPLGLTPEQVSQA RPMSRALFDALPVGPELLVPEVPNAGGPATFPGAPGPIGTVIVTPQISGPQQYSLVLGDGVQTLPPLVAQILQNAGSAGN TKPLTVEPSTLAKMPVVNRLDLSAYPDNPLEVVDIREHPSTCWWWERTAGENRARVRVVSGPTIPVAATEMNKVVSLVKA DTSGRQADQVYFGPDHANFVAVTGNNPGAQTSESLWWVTDAGARFGVEDSKEARDALGLTLTPSLAPWVALRLLPQGPTL SRADALVEHDTLPMDMTPAELVVPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eccB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007795 [H]
Pfam domain/function: PF05108 DUF690 [H]
EC number: NA
Molecular weight: Translated: 53703; Mature: 53572
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEESRGQRGSGYGLGLSTRTQVTGYQFLARRTAMALTRWHVRMEIEPGRRQTLAVVASV CCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCEEHHHHHHH SAALVICLGALLWSFISPSGQLNESPIIADRDSGALYVRVGDRLYPALNLASARLITGRP HHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEECCCCCCHHCCCCEEEEECCC DNPHLVRSSQIATMPRGPLVGIPGAPSSFSPKSPPASSWLVCDTVATSSSIGSLQGVTVT CCCCEEECCCEEECCCCCEEECCCCCCCCCCCCCCCCCEEEEEEHHCCCCCCCCCCEEEE VIDGTPDLTGHRQILSGSDAVVLRYGGDAWVIREGRRSRIEPTNRAVLLPLGLTPEQVSQ EECCCCCCCCCHHEECCCCEEEEEECCCEEEEECCCCCCCCCCCCEEEEEECCCHHHHHH ARPMSRALFDALPVGPELLVPEVPNAGGPATFPGAPGPIGTVIVTPQISGPQQYSLVLGD CCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECC GVQTLPPLVAQILQNAGSAGNTKPLTVEPSTLAKMPVVNRLDLSAYPDNPLEVVDIREHP CCHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHCCCCCEEECCCCCCCCEEEEEECCCC STCWWWERTAGENRARVRVVSGPTIPVAATEMNKVVSLVKADTSGRQADQVYFGPDHANF CCEEEEECCCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCE VAVTGNNPGAQTSESLWWVTDAGARFGVEDSKEARDALGLTLTPSLAPWVALRLLPQGPT EEEECCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHCCEEECCCHHCEEEEEEECCCCC LSRADALVEHDTLPMDMTPAELVVPK CHHHHHHHHCCCCCCCCCCHHEECCC >Mature Secondary Structure AEESRGQRGSGYGLGLSTRTQVTGYQFLARRTAMALTRWHVRMEIEPGRRQTLAVVASV CCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCEEHHHHHHH SAALVICLGALLWSFISPSGQLNESPIIADRDSGALYVRVGDRLYPALNLASARLITGRP HHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEECCCCCCHHCCCCEEEEECCC DNPHLVRSSQIATMPRGPLVGIPGAPSSFSPKSPPASSWLVCDTVATSSSIGSLQGVTVT CCCCEEECCCEEECCCCCEEECCCCCCCCCCCCCCCCCEEEEEEHHCCCCCCCCCCEEEE VIDGTPDLTGHRQILSGSDAVVLRYGGDAWVIREGRRSRIEPTNRAVLLPLGLTPEQVSQ EECCCCCCCCCHHEECCCCEEEEEECCCEEEEECCCCCCCCCCCCEEEEEECCCHHHHHH ARPMSRALFDALPVGPELLVPEVPNAGGPATFPGAPGPIGTVIVTPQISGPQQYSLVLGD CCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECC GVQTLPPLVAQILQNAGSAGNTKPLTVEPSTLAKMPVVNRLDLSAYPDNPLEVVDIREHP CCHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHCCCCCEEECCCCCCCCEEEEEECCCC STCWWWERTAGENRARVRVVSGPTIPVAATEMNKVVSLVKADTSGRQADQVYFGPDHANF CCEEEEECCCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCE VAVTGNNPGAQTSESLWWVTDAGARFGVEDSKEARDALGLTLTPSLAPWVALRLLPQGPT EEEECCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHCCEEECCCHHCEEEEEEECCCCC LSRADALVEHDTLPMDMTPAELVVPK CHHHHHHHHCCCCCCCCCCHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]