Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121637589
Identifier: 121637589
GI number: 121637589
Start: 1911677
End: 1912594
Strand: Direct
Name: 121637589
Synonym: BCG_1720
Alternate gene names: NA
Gene position: 1911677-1912594 (Clockwise)
Preceding gene: 121637588
Following gene: 121637590
Centisome position: 43.7
GC content: 60.02
Gene sequence:
>918_bases GTGTTGCCTCAACGCCCAAACTGCACCAAACTGTTTCGCCCACGGCGGGGCGTGTCTGAGAGGTATCGCGTGACCACCGC CCATAACGGATCCGCTCCGCGTTTTCAACGTACCCGCTCTGGCTACGACCCGGTCGCAGTCAATCATTACATCGCCGAAC TCGTGCTGCGTCAGCAGGCGCAGCACTGTGAGATTGAAACGCTCAAGGCAGAAATAGCCAGTCTGAAGGACGAAAACGCT GCCCTGAAGGACACCTCGCCGTCAGCACAGGCGGTGACCGATCGGATGGCGAAAATGCTTCGACTCGCTGTCGACGAGGT CTTCCAGATGCAGTCGGAGGCACGGGCCGAGGCCGCAACATTAGTTTCTGCGGCTAGGGATGAGGCGGAAGCGGTCCGAA CGCAGAAGCGAGAAATGCTGGCGGATATGAACGCCCGGCAAAGAGCGCTGGAGTCCGAGCATGCCGACGTGATGCGCCGC GCTCGTGAAGAGGCTGAACAGCTTGTGGCGCAGGCAACCGCCGAGGTGGAGCGGATGCGTGTCATCGATGCCAGACGCCG TGAGAAAGCCGAGCAGGAACTTGATGCCGAAATCATCAGGCTTCGCACCGATGCCCAATTTCAGATCGACGATCAGCTGC AGGCCACACAGCAGGAGTGTGAGAAGCGGCTTGGCGAAGCCAAAATCGAGGCCGATCGACGGCTGCATGTTGCCGACGAG CAGATTGAGCACGGCCTCAGCGAGGCTCGGCGAACGTTGGAAGAGATCAGCCAGCGGCGAGTCGGCATCCTCGAACAACT AGCGCGTATTCACGCACAGCTCGAGAATATTCCAGCGCTCCTGGAATCGGCTCGACATAGCGAGACGGAGCCACTGCAGT CCATAAACGGCGCCGTCGCTGAGCTACGGGCCATTTAG
Upstream 100 bases:
>100_bases CACTATAGTCCTGCTTGCACTTGAAAACAACGAGCCGTGATGCGGGTCGTAAGGGATTCCGGTAAGGAACACAGTCAAGT TCTTGCACGCGTCGGCGGCA
Downstream 100 bases:
>100_bases CGATCGCGTGCCTGAGCGCGACTCATCTGTGACAGTTCCGTCACGGCTGGGTCAGGTGCCGGTGTCCTGGCGACGCCGAC TGCGCACAGACCGAAACAGC
Product: putative coiled-coil structural protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MLPQRPNCTKLFRPRRGVSERYRVTTAHNGSAPRFQRTRSGYDPVAVNHYIAELVLRQQAQHCEIETLKAEIASLKDENA ALKDTSPSAQAVTDRMAKMLRLAVDEVFQMQSEARAEAATLVSAARDEAEAVRTQKREMLADMNARQRALESEHADVMRR AREEAEQLVAQATAEVERMRVIDARRREKAEQELDAEIIRLRTDAQFQIDDQLQATQQECEKRLGEAKIEADRRLHVADE QIEHGLSEARRTLEEISQRRVGILEQLARIHAQLENIPALLESARHSETEPLQSINGAVAELRAI
Sequences:
>Translated_305_residues MLPQRPNCTKLFRPRRGVSERYRVTTAHNGSAPRFQRTRSGYDPVAVNHYIAELVLRQQAQHCEIETLKAEIASLKDENA ALKDTSPSAQAVTDRMAKMLRLAVDEVFQMQSEARAEAATLVSAARDEAEAVRTQKREMLADMNARQRALESEHADVMRR AREEAEQLVAQATAEVERMRVIDARRREKAEQELDAEIIRLRTDAQFQIDDQLQATQQECEKRLGEAKIEADRRLHVADE QIEHGLSEARRTLEEISQRRVGILEQLARIHAQLENIPALLESARHSETEPLQSINGAVAELRAI >Mature_305_residues MLPQRPNCTKLFRPRRGVSERYRVTTAHNGSAPRFQRTRSGYDPVAVNHYIAELVLRQQAQHCEIETLKAEIASLKDENA ALKDTSPSAQAVTDRMAKMLRLAVDEVFQMQSEARAEAATLVSAARDEAEAVRTQKREMLADMNARQRALESEHADVMRR AREEAEQLVAQATAEVERMRVIDARRREKAEQELDAEIIRLRTDAQFQIDDQLQATQQECEKRLGEAKIEADRRLHVADE QIEHGLSEARRTLEEISQRRVGILEQLARIHAQLENIPALLESARHSETEPLQSINGAVAELRAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34667; Mature: 34667
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPQRPNCTKLFRPRRGVSERYRVTTAHNGSAPRFQRTRSGYDPVAVNHYIAELVLRQQA CCCCCCCHHHHHCCCCCCCHHHEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHH QHCEIETLKAEIASLKDENAALKDTSPSAQAVTDRMAKMLRLAVDEVFQMQSEARAEAAT HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVSAARDEAEAVRTQKREMLADMNARQRALESEHADVMRRAREEAEQLVAQATAEVERMR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIDARRREKAEQELDAEIIRLRTDAQFQIDDQLQATQQECEKRLGEAKIEADRRLHVADE HHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH QIEHGLSEARRTLEEISQRRVGILEQLARIHAQLENIPALLESARHSETEPLQSINGAVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH ELRAI HHHCC >Mature Secondary Structure MLPQRPNCTKLFRPRRGVSERYRVTTAHNGSAPRFQRTRSGYDPVAVNHYIAELVLRQQA CCCCCCCHHHHHCCCCCCCHHHEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHH QHCEIETLKAEIASLKDENAALKDTSPSAQAVTDRMAKMLRLAVDEVFQMQSEARAEAAT HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVSAARDEAEAVRTQKREMLADMNARQRALESEHADVMRRAREEAEQLVAQATAEVERMR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIDARRREKAEQELDAEIIRLRTDAQFQIDDQLQATQQECEKRLGEAKIEADRRLHVADE HHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH QIEHGLSEARRTLEEISQRRVGILEQLARIHAQLENIPALLESARHSETEPLQSINGAVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH ELRAI HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA