Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is PE17 [H]
Identifier: 121637554
GI number: 121637554
Start: 1861010
End: 1861942
Strand: Direct
Name: PE17 [H]
Synonym: BCG_1685
Alternate gene names: 121637554
Gene position: 1861010-1861942 (Clockwise)
Preceding gene: 121637552
Following gene: 121637555
Centisome position: 42.54
GC content: 65.17
Gene sequence:
>933_bases ATGTCGTTTCTCACCGTGGCGCCGGACATGGTAACGGCGGCCGCCGGGAATTTGGAAAGCGTTGGCTCGGCACTGAATGA GGCCGCTGCGGCGGCGGCGCCAGCCACGGTTGGGCTGGCGGCCCCGGCCGCGGATCGGGTGTCGGCGGTCGTCGCGGCGA TGTTGGGGGCATATGCCCGGGATTTTCAAGGCATCAGTGCTCAGATCGCGGGTTTTCATAACCAGTTCGTGGGCGCGTTG CGGGGCGGTGCGGCCGCCTACGCCAGCGCCGAAGCCGCCAACGTCCAGCAGACCGTGGTGAACGCCGTGAATGCGCCCGC CCAGGCGCTGTTGGGGCACCCGTTGATCGGGCCCGAGACGGTCGGCTCCAGCGCCGCCGCGGTCTCCTTCGGCTTCGGCC CGTTGCTCCTCGCTGGTAGCGATCCGCTGCTGGCCGTGCCATTCAGCTATCCGGCCAGTCTGCCCACCCCATTCGGTCCA GTAACGATGACGCTCAACGGGTCGTTTGATCCGCTTACCCAACAGGTTGTTTTCGACTCGGGATCACTCACCGCGCCCGC TCCGTTCGTGTACGGTCTTGGTGCGGTAGGTCCAGCTCTCACCACCATGACCGCGCTGCAAAACAGCGGCACAGCATTTT CCGGCGCGGTGCAAAGCGGGAACCTGCTAGGGGCCGCGGGCGCGCTTCTGCAAGCTCCCGGCAACGCGGTGACCGGCTTC CTGTTTGGCCAAACAGCGATATCGCAGTCGATACCGGGGCCATCGAATCTGGGCTACGAGTCGGTGGGTATCAGCGTTCC GGTCGGGGGGCTCTTGGCTCCGCTGCAGCCCGTGACGGTCACGTTGACGCCCACATCTGGTATGCCGACTGCCATTCAAT TGAGTGGTACGCAGTTTGGCGGCCTTCTTCCCGCCCTACTCAACGGTTTCTAA
Upstream 100 bases:
>100_bases AGTTTTTAACTAGATCAGGATTGCTTAGCTGTAGACTTTATTTCTCAATGACCACGTAAGGATTGCTGCGGCCAGTACAA CGTGTACAAGGAGTCGGGCT
Downstream 100 bases:
>100_bases CCGTCTGCGGACAGCCGCCGCAAACCGCGTGATCAGCGTGTTTGATGCGACTTGTGCCACAAACACCGAGGTCGTCATTG CCGGGCTCAGCCCGCACCAC
Product: PE family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGAL RGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLIGPETVGSSAAAVSFGFGPLLLAGSDPLLAVPFSYPASLPTPFGP VTMTLNGSFDPLTQQVVFDSGSLTAPAPFVYGLGAVGPALTTMTALQNSGTAFSGAVQSGNLLGAAGALLQAPGNAVTGF LFGQTAISQSIPGPSNLGYESVGISVPVGGLLAPLQPVTVTLTPTSGMPTAIQLSGTQFGGLLPALLNGF
Sequences:
>Translated_310_residues MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGAL RGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLIGPETVGSSAAAVSFGFGPLLLAGSDPLLAVPFSYPASLPTPFGP VTMTLNGSFDPLTQQVVFDSGSLTAPAPFVYGLGAVGPALTTMTALQNSGTAFSGAVQSGNLLGAAGALLQAPGNAVTGF LFGQTAISQSIPGPSNLGYESVGISVPVGGLLAPLQPVTVTLTPTSGMPTAIQLSGTQFGGLLPALLNGF >Mature_309_residues SFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALR GGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLIGPETVGSSAAAVSFGFGPLLLAGSDPLLAVPFSYPASLPTPFGPV TMTLNGSFDPLTQQVVFDSGSLTAPAPFVYGLGAVGPALTTMTALQNSGTAFSGAVQSGNLLGAAGALLQAPGNAVTGFL FGQTAISQSIPGPSNLGYESVGISVPVGGLLAPLQPVTVTLTPTSGMPTAIQLSGTQFGGLLPALLNGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mycobacterial PE family. PGRS subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000084 [H]
Pfam domain/function: PF00934 PE [H]
EC number: NA
Molecular weight: Translated: 30220; Mature: 30088
Theoretical pI: Translated: 3.96; Mature: 3.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR CCEEECCCHHHHHHCCCHHHHHHHHHHHHHHCCCCHHEECCCCHHHHHHHHHHHHHHHHH DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLIGPET HHCCCHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHH VGSSAAAVSFGFGPLLLAGSDPLLAVPFSYPASLPTPFGPVTMTLNGSFDPLTQQVVFDS CCCCCEEEEECCCEEEEECCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHEECC GSLTAPAPFVYGLGAVGPALTTMTALQNSGTAFSGAVQSGNLLGAAGALLQAPGNAVTGF CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEECCHHHHCCCCCCEEEE LFGQTAISQSIPGPSNLGYESVGISVPVGGLLAPLQPVTVTLTPTSGMPTAIQLSGTQFG EHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCEEEEECCCCHH GLLPALLNGF HHHHHHHCCC >Mature Secondary Structure SFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR CEEECCCHHHHHHCCCHHHHHHHHHHHHHHCCCCHHEECCCCHHHHHHHHHHHHHHHHH DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLIGPET HHCCCHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHH VGSSAAAVSFGFGPLLLAGSDPLLAVPFSYPASLPTPFGPVTMTLNGSFDPLTQQVVFDS CCCCCEEEEECCCEEEEECCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHEECC GSLTAPAPFVYGLGAVGPALTTMTALQNSGTAFSGAVQSGNLLGAAGALLQAPGNAVTGF CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEECCHHHHCCCCCCEEEE LFGQTAISQSIPGPSNLGYESVGISVPVGGLLAPLQPVTVTLTPTSGMPTAIQLSGTQFG EHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCEEEEECCCCHH GLLPALLNGF HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]