Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is lysX [H]
Identifier: 121637526
GI number: 121637526
Start: 1823822
End: 1825276
Strand: Direct
Name: lysX [H]
Synonym: BCG_1657
Alternate gene names: 121637526
Gene position: 1823822-1825276 (Clockwise)
Preceding gene: 121637525
Following gene: 121637533
Centisome position: 41.69
GC content: 65.98
Gene sequence:
>1455_bases ATGGTGGCAGCGGCCGGCGAGCCGCTGAATTGCCAGCGAGCGAACCCGGAGGTGACTGTGAAGCTGCCGTCGGCCGATGT GGTACCGAGGCTCCGTGGTCGCCAGCGTGTAGTCGTGCACGTCGATTCCCGCACGGCCCGCTGTGTCGGCGCGCTGGCGC TGGTGTGCGCGGCCTGCTGGCTGATCGCGCTGCTCGCCGGCGACTACCGGCACGCCCAGTGGGCGGTCGCCGGCCGGTTG GGCTGGTCGCTGACGGTCCTGGCTGCGGTGGCATTCATTGCTCGCGGCATCTTCCTGGGCCGCCCGGTCACGGCCATGCA TGCGACCGCGGCCGGCCTATTTTTGCTCGCCGGACTGGCTGCCCACGTGTTGGTCGCAGATCTGCTCGGTGAGATTCTGA TAGCCGGTTCGGGATGGGCACTGATGTGGCCGACGTCGGCGCATCCGCGACCCGAAGATCTGCCCCGCGTGTGGGCGTTG ATCAATGCCACCCGCGCGGACTCGCTTGCTCCGTTTGCCATGCAGGCGGGCAAGAGCCATCACTTCAGCGCGGCCGGCAC CGCGGCTCTGGCGTATCGGACCCGTATCGGCTATGCGGTGGTCAGCGGCGACCCGATCGGCGACGAGGCGCAATTCCCCC AGCTGGTCGCCGACTTCGCGGCCATGTGTCACATGCACGGCTGGCGAATCGTGGTCGTGGGCTGCAGCGAACGACGGCTC GGCCTGTGGAGCGACCCCATGGTGGTCGGACAATCGTTGCGGCCCATACCGATTGGCCGGGATGTCGTCATCGACGTGTC TAACTTTGAGATGACCGGGCGTAGGTTTCGCAACCTGCGTCAGGCGGTGAAACGCACCCACAATTTCGGCGTCACGACCG AGATCGTCGCTGAACAGCAACTCGACGACCAGCGGCAGGCGGAGCTGGCCGAGGTGCTGGCGGCGTCACCTAGCGGCGCC CGCACCGATCGCGGCTTTTGCATGAACCTGGACGGCGTGCTGGAGGGTCGATACCCCGGAATACAACTGATCATCGCGCG AGACGCATCGGGTCGGGTGCAGGGTTTCCACCGGTACGCGACCGCCGGCGGCGGCAGCGACATGTCTCTGGATGTACCGT GGCGGCGCCGCGGGGCCCCGAACGGGATCGATGAGCGGCTCAGCGCTGACATGATTGCGGCCGCCAAAGATGCTGGGGTA CAACGGTTGTCACTGGCATTCGCCGCGTTCCCCGACCTTTTCGGCGCCAACCAGCTCGGCCGCCTGCAGCGTGTCTGCCG TGCGTTGATCCATATCCTCGATCCGTTGATCGCTCTCGAGTCGTTATACCGATACCTGCGCAAGTTCCACGCGCTGGATG AGCGGCGTTACGTGCTGATATCGATGACTCAGGTCTTTGCGCTGGCGTTGGTGTTGTTGTCGCTGGAGTTCGTCCCGCGG CGGCGACATCTCTGA
Upstream 100 bases:
>100_bases GTATTTTCCCGCCACCCCTGACAGTGCGGCAGGACGCTCGTAGGATTCCGGGTCAGCACGGCTGTGATCAGGCGTAACGT TCCTGGTAGCCAGATGACCG
Downstream 100 bases:
>100_bases TCCGTCGCTATGGACAGCTCGGCGCATTGAATGTCGTTGGGCAGGTGGTGGGTGGCTACCACCACGGTCCGCATAGCGCT CATGATCCCGGAGTTCGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Lysyl-tRNA synthetase; Phosphatidylglycerol lysyltransferase; Lysylphosphatidylglycerol synthetase; LPG synthetase [H]
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MVAAAGEPLNCQRANPEVTVKLPSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACWLIALLAGDYRHAQWAVAGRL GWSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLAAHVLVADLLGEILIAGSGWALMWPTSAHPRPEDLPRVWAL INATRADSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRL GLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASPSGA RTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGV QRLSLAFAAFPDLFGANQLGRLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPR RRHL
Sequences:
>Translated_484_residues MVAAAGEPLNCQRANPEVTVKLPSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACWLIALLAGDYRHAQWAVAGRL GWSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLAAHVLVADLLGEILIAGSGWALMWPTSAHPRPEDLPRVWAL INATRADSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRL GLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASPSGA RTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGV QRLSLAFAAFPDLFGANQLGRLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPR RRHL >Mature_484_residues MVAAAGEPLNCQRANPEVTVKLPSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACWLIALLAGDYRHAQWAVAGRL GWSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLAAHVLVADLLGEILIAGSGWALMWPTSAHPRPEDLPRVWAL INATRADSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRL GLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASPSGA RTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGV QRLSLAFAAFPDLFGANQLGRLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPR RRHL
Specific function: Catalyzes the production of L-lysyl-tRNA(Lys)transfer and the transfer of a lysyl group from L-lysyl-tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), one of the components of the bacterial membrane wit
COG id: COG2898
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 OB DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004364 - InterPro: IPR018150 - InterPro: IPR006195 - InterPro: IPR002313 - InterPro: IPR018149 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00152 tRNA-synt_2; PF01336 tRNA_anti [H]
EC number: =6.1.1.6; =2.3.2.3 [H]
Molecular weight: Translated: 52643; Mature: 52643
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAAAGEPLNCQRANPEVTVKLPSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACW CCCCCCCCCCCCCCCCEEEEECCCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHH LIALLAGDYRHAQWAVAGRLGWSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLA HHHHHHCCCCHHHEEEHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH AHVLVADLLGEILIAGSGWALMWPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSH HHHHHHHHHHHHEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCC HFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRL CCCCCCHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCC GLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQ CCCCCCHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LDDQRQAELAEVLAASPSGARTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYA CCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHH TAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLG CCCCCCCCEEECCHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHH RLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCC RRHL CCCC >Mature Secondary Structure MVAAAGEPLNCQRANPEVTVKLPSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACW CCCCCCCCCCCCCCCCEEEEECCCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHH LIALLAGDYRHAQWAVAGRLGWSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLA HHHHHHCCCCHHHEEEHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH AHVLVADLLGEILIAGSGWALMWPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSH HHHHHHHHHHHHEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCC HFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRL CCCCCCHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCC GLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQ CCCCCCHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LDDQRQAELAEVLAASPSGARTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYA CCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHH TAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLG CCCCCCCCEEECCHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHH RLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCC RRHL CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA