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The map label for this gene is ycdQ [C]

Identifier: 121637441

GI number: 121637441

Start: 1723369

End: 1724409

Strand: Direct

Name: ycdQ [C]

Synonym: BCG_1572

Alternate gene names: 121637441

Gene position: 1723369-1724409 (Clockwise)

Preceding gene: 121637440

Following gene: 121637442

Centisome position: 39.4

GC content: 63.11

Gene sequence:

>1041_bases
GTGAGTATCGTCTCGATCTCCTACAACCAAGAGGAGTACATTCGCGAGGCCCTGGACGGCTTCGCCGCCCAGAGGACCGA
GTTCCCCGTCGAGGTGATCATCGCTGACGATGCCTCCACGGACGCCACCCCGAGGATCATAGGAGAGTACGCCGCCCGCT
ATCCGCAGCTGTTTCGGCCGATCCTGCGGCAGACCAACATCGGTGTCCACGCCAATTTCAAGGATGTGCTGTCCGCCGCT
CGTGGCGAGTACCTCGCACTGTGCGAAGGCGACGATTACTGGACCGATCCGCTGAAGCTGTCCAAGCAAGTAAAGTACCT
GGACCGGCATCCGGAGACGACGGTGTGTTTTCATCCTGTGCGAGTGATCTATGAGGATGGCGCAAAAGACTCCGAGTTCC
CGCCGCTCAGCTGGCGCCGCGACCTGAGCGTCGATGCCCTGCTCGCGCGGAACTTCATCCAAACCAACTCGGTCGTGTAC
CGCCGTCAGCCGAGCTACGACGACATCCCGGCCAACGTCATGCCGATAGATTGGTACTTGCATGTGCGGCATGCGGTGGG
CGGCGAGATCGCCATGTTGCCCGAGACGATGGCGGTCTACCGTCGCCACGCTCACGGTATTTGGCATTCCGCGTACACTG
ACCGCCGAAAGTTTTGGGAGACACGAGGCCATGGGATGGCCGCGACGCTCGAGGCGATGCTCGACCTAGTTCACGGCCAC
CGCGAGCGCGAGGCGATCGTCGGTGAGGTGTCCGCCTGGGTGCTTCGCGAGATCGGAAAGACACCCGGCCGACAGGGTCG
CGCCCTGCTTCTGAAGTCCATCGCGGACCATCCGCGGATGACGATGCTGTCGCTACAACACCGGTGGGCGCAAACGCCCT
GGCGGCGGTTCAAGCGCCGGCTGTCCACCGAGTTATCGAGCTTGGCGGCGCTTGCGTACGCCACCCGACGGCGCGCACTC
GAAGGTCGGGACGGCGGTTATCGCGAAACCACTTCTCCGCCGACCGGTAGGGGACGTAACGTCCGCGGATCACATGCCTA
G

Upstream 100 bases:

>100_bases
CACGACCACATGGCCATTGCCGACGTTGCGCGGGTCGTTGCGCCGTTCGGGGAAGGGTTAGCGCGCGGTGGTTGACCCGA
CAGCGACGGATTCGCCCAAG

Downstream 100 bases:

>100_bases
ATCTTGATAGATCGCCCGTCTGGCCTCTATGGATGGAGCATGCGGGATCGGACCGGTTGCCGCCGACTCGACGACCGAAA
GAGCCATCAAATAGCCTTGC

Product: putative sugar transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MSIVSISYNQEEYIREALDGFAAQRTEFPVEVIIADDASTDATPRIIGEYAARYPQLFRPILRQTNIGVHANFKDVLSAA
RGEYLALCEGDDYWTDPLKLSKQVKYLDRHPETTVCFHPVRVIYEDGAKDSEFPPLSWRRDLSVDALLARNFIQTNSVVY
RRQPSYDDIPANVMPIDWYLHVRHAVGGEIAMLPETMAVYRRHAHGIWHSAYTDRRKFWETRGHGMAATLEAMLDLVHGH
REREAIVGEVSAWVLREIGKTPGRQGRALLLKSIADHPRMTMLSLQHRWAQTPWRRFKRRLSTELSSLAALAYATRRRAL
EGRDGGYRETTSPPTGRGRNVRGSHA

Sequences:

>Translated_346_residues
MSIVSISYNQEEYIREALDGFAAQRTEFPVEVIIADDASTDATPRIIGEYAARYPQLFRPILRQTNIGVHANFKDVLSAA
RGEYLALCEGDDYWTDPLKLSKQVKYLDRHPETTVCFHPVRVIYEDGAKDSEFPPLSWRRDLSVDALLARNFIQTNSVVY
RRQPSYDDIPANVMPIDWYLHVRHAVGGEIAMLPETMAVYRRHAHGIWHSAYTDRRKFWETRGHGMAATLEAMLDLVHGH
REREAIVGEVSAWVLREIGKTPGRQGRALLLKSIADHPRMTMLSLQHRWAQTPWRRFKRRLSTELSSLAALAYATRRRAL
EGRDGGYRETTSPPTGRGRNVRGSHA
>Mature_345_residues
SIVSISYNQEEYIREALDGFAAQRTEFPVEVIIADDASTDATPRIIGEYAARYPQLFRPILRQTNIGVHANFKDVLSAAR
GEYLALCEGDDYWTDPLKLSKQVKYLDRHPETTVCFHPVRVIYEDGAKDSEFPPLSWRRDLSVDALLARNFIQTNSVVYR
RQPSYDDIPANVMPIDWYLHVRHAVGGEIAMLPETMAVYRRHAHGIWHSAYTDRRKFWETRGHGMAATLEAMLDLVHGHR
EREAIVGEVSAWVLREIGKTPGRQGRALLLKSIADHPRMTMLSLQHRWAQTPWRRFKRRLSTELSSLAALAYATRRRALE
GRDGGYRETTSPPTGRGRNVRGSHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1520_MYCTU (P64863)

Other databases:

- EMBL:   BX842576
- EMBL:   AE000516
- PIR:   H70722
- RefSeq:   NP_216036.1
- RefSeq:   NP_336023.1
- ProteinModelPortal:   P64863
- EnsemblBacteria:   EBMYCT00000001663
- EnsemblBacteria:   EBMYCT00000070067
- GeneID:   886447
- GeneID:   924384
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT1570
- KEGG:   mtu:Rv1520
- TIGR:   MT1570
- TubercuList:   Rv1520
- GeneTree:   EBGT00050000018032
- HOGENOM:   HBG565158
- OMA:   HRNEPER
- ProtClustDB:   CLSK791221
- InterPro:   IPR001173

Pfam domain/function: PF00535 Glycos_transf_2

EC number: NA

Molecular weight: Translated: 39578; Mature: 39447

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIVSISYNQEEYIREALDGFAAQRTEFPVEVIIADDASTDATPRIIGEYAARYPQLFRP
CEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
ILRQTNIGVHANFKDVLSAARGEYLALCEGDDYWTDPLKLSKQVKYLDRHPETTVCFHPV
HHHHCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEECHH
RVIYEDGAKDSEFPPLSWRRDLSVDALLARNFIQTNSVVYRRQPSYDDIPANVMPIDWYL
EEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEHHHE
HVRHAVGGEIAMLPETMAVYRRHAHGIWHSAYTDRRKFWETRGHGMAATLEAMLDLVHGH
EEHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
REREAIVGEVSAWVLREIGKTPGRQGRALLLKSIADHPRMTMLSLQHRWAQTPWRRFKRR
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHH
LSTELSSLAALAYATRRRALEGRDGGYRETTSPPTGRGRNVRGSHA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SIVSISYNQEEYIREALDGFAAQRTEFPVEVIIADDASTDATPRIIGEYAARYPQLFRP
EEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
ILRQTNIGVHANFKDVLSAARGEYLALCEGDDYWTDPLKLSKQVKYLDRHPETTVCFHPV
HHHHCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEECHH
RVIYEDGAKDSEFPPLSWRRDLSVDALLARNFIQTNSVVYRRQPSYDDIPANVMPIDWYL
EEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEHHHE
HVRHAVGGEIAMLPETMAVYRRHAHGIWHSAYTDRRKFWETRGHGMAATLEAMLDLVHGH
EEHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
REREAIVGEVSAWVLREIGKTPGRQGRALLLKSIADHPRMTMLSLQHRWAQTPWRRFKRR
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHH
LSTELSSLAALAYATRRRALEGRDGGYRETTSPPTGRGRNVRGSHA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036