Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637294
Identifier: 121637294
GI number: 121637294
Start: 1561121
End: 1561906
Strand: Reverse
Name: 121637294
Synonym: BCG_1425c
Alternate gene names: NA
Gene position: 1561906-1561121 (Counterclockwise)
Preceding gene: 121637295
Following gene: 121637293
Centisome position: 35.7
GC content: 63.74
Gene sequence:
>786_bases ATGGCTGAGACAACCGAACCACCGTCGGACGCGGGGACATCGCAAGCCGACGCGATGGCGTTGGCCGCCGAAGCCGAAGC CGCCGAAGCCGAAGCGCTGGCCGCCGCGGCGCGGGCCCGTGCCCGTGCCGCCCGGTTGAAGCGTGAGGCGCTGGCGATGG CCCCAGCCGAGGACGAGAACGTCCCCGAGGAGTATGCAGACTGGGAAGACGCCGAAGACTATGACGACTATGACGACTAT GAGGCCGCAGACCAGGAGGCCGCACGGTCGGCATCCTGGCGACGGCGGTTGCGGGTGCGGTTACCAAGACTGTCCACGAT TGCCATGGCGGCCGCAGTCGTCATCATCTGCGGCTTCACCGGGCTCAGCGGATACATTGTGTGGCAACACCATGAGGCCA CCGAACGCCAGCAGCGCGCCGCGGCGTTCGCCGCCGGAGCCAAGCAAGGTGTCATCAACATGACCTCGCTGGACTTCAAC AAGGCCAAAGAAGACGTCGCGCGTGTGATCGACAGCTCCACCGGCGAATTCAGGGATGACTTCCAGCAGCGGGCAGCCGA TTTCACCAAGGTTGTCGAACAGTCCAAAGTGGTCACCGAAGGCACGGTGAACGCGACAGCCGTCGAATCCATGAACGAGC ATTCCGCCGTGGTGCTCGTCGCGGCGACTTCACGGGTCACCAATTCCGCTGGGGCGAAAGACGAACCACGTGCGTGGCGG CTCAAAGTGACCGTGACCGAAGAGGGGGGACAGTACAAGATGTCGAAAGTTGAGTTCGTACCGTGA
Upstream 100 bases:
>100_bases CCTCGTAGGAGTTCGCTGGGGCCTCGAATGTTAGCAATGGGCAATACTGTGAGCGATACCGGAGTTCAGTCGAGAATGAT ACTGACGGGCTGTATCCACG
Downstream 100 bases:
>100_bases CCGATGACGTACGCGACGTCAACACCGAAACCACTGACGCCACCGAAGTCGCTGAGATCGACTCAGCCGCAGGCGAAGCC GGTGATTCGGCGACCGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MAETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAARLKREALAMAPAEDENVPEEYADWEDAEDYDDYDDY EAADQEAARSASWRRRLRVRLPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFN KAKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWR LKVTVTEEGGQYKMSKVEFVP
Sequences:
>Translated_261_residues MAETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAARLKREALAMAPAEDENVPEEYADWEDAEDYDDYDDY EAADQEAARSASWRRRLRVRLPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFN KAKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWR LKVTVTEEGGQYKMSKVEFVP >Mature_260_residues AETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAARLKREALAMAPAEDENVPEEYADWEDAEDYDDYDDYE AADQEAARSASWRRRLRVRLPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNK AKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWRL KVTVTEEGGQYKMSKVEFVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv1362c
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1363_MYCTU (Q11033)
Other databases:
- EMBL: BX842576 - EMBL: AE000516 - PIR: B70742 - RefSeq: NP_215879.1 - RefSeq: NP_335857.1 - EnsemblBacteria: EBMYCT00000000033 - EnsemblBacteria: EBMYCT00000070615 - GeneID: 886811 - GeneID: 924544 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT1408 - KEGG: mtu:Rv1363c - TIGR: MT1408 - TubercuList: Rv1363c - GeneTree: EBGT00050000014807 - HOGENOM: HBG670697 - OMA: GVVNMTS - ProtClustDB: CLSK791123
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28308; Mature: 28177
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x15663be4)-;
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAARLKREALAMAPAEDEN CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VPEEYADWEDAEDYDDYDDYEAADQEAARSASWRRRLRVRLPRLSTIAMAAAVVIICGFT CCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC GLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDD CCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCHHHHH FQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWR HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEEECCHHHCCCCCCCCCCEEE LKVTVTEEGGQYKMSKVEFVP EEEEEECCCCCEEECEEECCH >Mature Secondary Structure AETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAARLKREALAMAPAEDEN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VPEEYADWEDAEDYDDYDDYEAADQEAARSASWRRRLRVRLPRLSTIAMAAAVVIICGFT CCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC GLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDD CCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCHHHHH FQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWR HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEEECCHHHCCCCCCCCCCEEE LKVTVTEEGGQYKMSKVEFVP EEEEEECCCCCEEECEEECCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036