Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637178
Identifier: 121637178
GI number: 121637178
Start: 1422916
End: 1423704
Strand: Reverse
Name: 121637178
Synonym: BCG_1309c
Alternate gene names: NA
Gene position: 1423704-1422916 (Counterclockwise)
Preceding gene: 121637180
Following gene: 121637177
Centisome position: 32.55
GC content: 66.92
Gene sequence:
>789_bases ATGAGCGCTCGACGAATCAGGTCTTGGAAAAGGTTCGACAATCGATCCGCAAATGCAGCTGAGCCGGACCCGCAGCTGGC CGGGACCGGCGGGCGGCCCAAAGTGTCCACGCGGGCATTGGCGCAGGTCATCGAACGGAGTTCGCGGATACAGGGCCCGG CAGCACAGGCGTATGTGGCCCGCCTGCGTCGCGCCCACCCGGGGGCCAGCCCCGCCAAGATCGTAGCCAAGCTCGAGAAA CGCTTCTTGTCGGTGGTGACGGCCAGTGGAGCGGCGGTAGGTACGGCCGCGACCTTACCGGGGATCGGCACCCTGGCCGC ATGGTTCGCCGCGGCCGGAGAGGTTGTCGTGTTCCTCGAGGCCACCGCGCTGTTCGTGCTGGCGCTGGCCTCGGTACACG CCATTCCCCTCGACCACCGAGAACGGCGCCGTGCCCTGGTCTTGGCGGTGCTGGTCGGCGACAACACTACTGCGGTGGCC GATCTGCTCGGTCCGGGCCGAACCAGCGGCGGCTGGGTGTCGGAGACCATGGCCTCGCTGCCGCTGCCGGCGATATCGTC GTTGAACTCGCGAATGCTCAAATACGTCGTCAAACGATTCGCGCTGAAACGCGGCGCGCTCATGTTTGGCAAGCTGGTGC CGATGGGTATCGGCGCGATCATCGGCGCCATCGGCAATCGGCTGGTCGGCAAGAAGCTCGTCCGTAATGCGCGATCGGCA TTCGGCACCCCGCCGGCGCGCTGGCCGGTCACCCTGCACGTGCTACCGACCGTTCGGGATGCCAGCTAG
Upstream 100 bases:
>100_bases ATTATTCCGCTTCGAGCGGTGAACCGCGCCGCTACCGAAACACATGCTCGGATCGTTGAACCGGCATTAGCCTGAGGGGA CGCCATTCGCAGGAGAGAAG
Downstream 100 bases:
>100_bases CGCGCGTTGCCCGGTCTCTCTGGCGAATCGCTGGCAAAGCGTTAGCCTTTATGGGGCAGACCGTTCACCGACTGCCAGCA GGCGCCGCGCAATGCGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MSARRIRSWKRFDNRSANAAEPDPQLAGTGGRPKVSTRALAQVIERSSRIQGPAAQAYVARLRRAHPGASPAKIVAKLEK RFLSVVTASGAAVGTAATLPGIGTLAAWFAAAGEVVVFLEATALFVLALASVHAIPLDHRERRRALVLAVLVGDNTTAVA DLLGPGRTSGGWVSETMASLPLPAISSLNSRMLKYVVKRFALKRGALMFGKLVPMGIGAIIGAIGNRLVGKKLVRNARSA FGTPPARWPVTLHVLPTVRDAS
Sequences:
>Translated_262_residues MSARRIRSWKRFDNRSANAAEPDPQLAGTGGRPKVSTRALAQVIERSSRIQGPAAQAYVARLRRAHPGASPAKIVAKLEK RFLSVVTASGAAVGTAATLPGIGTLAAWFAAAGEVVVFLEATALFVLALASVHAIPLDHRERRRALVLAVLVGDNTTAVA DLLGPGRTSGGWVSETMASLPLPAISSLNSRMLKYVVKRFALKRGALMFGKLVPMGIGAIIGAIGNRLVGKKLVRNARSA FGTPPARWPVTLHVLPTVRDAS >Mature_261_residues SARRIRSWKRFDNRSANAAEPDPQLAGTGGRPKVSTRALAQVIERSSRIQGPAAQAYVARLRRAHPGASPAKIVAKLEKR FLSVVTASGAAVGTAATLPGIGTLAAWFAAAGEVVVFLEATALFVLALASVHAIPLDHRERRRALVLAVLVGDNTTAVAD LLGPGRTSGGWVSETMASLPLPAISSLNSRMLKYVVKRFALKRGALMFGKLVPMGIGAIIGAIGNRLVGKKLVRNARSAF GTPPARWPVTLHVLPTVRDAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27602; Mature: 27470
Theoretical pI: Translated: 12.32; Mature: 12.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARRIRSWKRFDNRSANAAEPDPQLAGTGGRPKVSTRALAQVIERSSRIQGPAAQAYVA CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH RLRRAHPGASPAKIVAKLEKRFLSVVTASGAAVGTAATLPGIGTLAAWFAAAGEVVVFLE HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHCHHHHCCCHHHHHHHHHCCCCEEEEHH ATALFVLALASVHAIPLDHRERRRALVLAVLVGDNTTAVADLLGPGRTSGGWVSETMASL HHHHHHHHHHHHHCCCCCHHHHHHEEEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHC PLPAISSLNSRMLKYVVKRFALKRGALMFGKLVPMGIGAIIGAIGNRLVGKKLVRNARSA CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGTPPARWPVTLHVLPTVRDAS CCCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure SARRIRSWKRFDNRSANAAEPDPQLAGTGGRPKVSTRALAQVIERSSRIQGPAAQAYVA CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH RLRRAHPGASPAKIVAKLEKRFLSVVTASGAAVGTAATLPGIGTLAAWFAAAGEVVVFLE HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHCHHHHCCCHHHHHHHHHCCCCEEEEHH ATALFVLALASVHAIPLDHRERRRALVLAVLVGDNTTAVADLLGPGRTSGGWVSETMASL HHHHHHHHHHHHHCCCCCHHHHHHEEEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHC PLPAISSLNSRMLKYVVKRFALKRGALMFGKLVPMGIGAIIGAIGNRLVGKKLVRNARSA CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGTPPARWPVTLHVLPTVRDAS CCCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA