Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637160
Identifier: 121637160
GI number: 121637160
Start: 1404044
End: 1404586
Strand: Reverse
Name: 121637160
Synonym: BCG_1291c
Alternate gene names: NA
Gene position: 1404586-1404044 (Counterclockwise)
Preceding gene: 121637161
Following gene: 121637159
Centisome position: 32.11
GC content: 66.85
Gene sequence:
>543_bases GTGAGCAAACCCTTCGCGCCGCGCCGTCTGTACACCCCACGCACATCGCGCACGCTCGCCCCGCGGCTGGATCCCGAGGC CGTCGGCAGGACAACCGAATCCATCGCACGGTTTTTCGGAACCGGCCGTTACCTGCTGGTGCAGACGCTGCTCGTACTGA CATGGATCGTGCTGAACCTGTTTGCGGTCGGCTTGCGCTGGGATCCGTACCCCTTCATCCTGCTCAATCTGGCCTTCTCC ACGCAGGCCTCGTACGCCGCACCGCTGATTCTGCTCGCCCAGAACCGTCAGGAAAAGCGTGACCGCGCGGTGTTCGAAGA GGATCGTCGGCGGGCCGCACAGACCAAGGCCGACACCGAGTACAACGCCCGCGAGCTGGCAGCGCTGCGGCTGGCCATCG GCGAGGTCCCCACGCGCGACTACCTGCGCCACGAACTGGACAGCCTGCGCGCTCTGTTGGCGGAGCTGCAGCCGACGGAT CCGGATGTGGCGCAGCCGCGGGTGGCCGACGAGGCGGAGCAGCACGCCAAGAAATCGGGGTGA
Upstream 100 bases:
>100_bases CCGTGGACGACCTGCTCGACCATCTATTGCCGCATGACTGGCGTGTAGATATGCCGGAGCTCGACCCCTCCGGAGCACCG GACAGACCCGGAGGACCACG
Downstream 100 bases:
>100_bases TTACCGAGTCGGCCATTGCGCCACTCCCGTGACAAGAGTTATGTATGGTGATCTAGTTCACGAAACGAAGAAAGAAGCTA AGAAGACATAGGTTTCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSKPFAPRRLYTPRTSRTLAPRLDPEAVGRTTESIARFFGTGRYLLVQTLLVLTWIVLNLFAVGLRWDPYPFILLNLAFS TQASYAAPLILLAQNRQEKRDRAVFEEDRRRAAQTKADTEYNARELAALRLAIGEVPTRDYLRHELDSLRALLAELQPTD PDVAQPRVADEAEQHAKKSG
Sequences:
>Translated_180_residues MSKPFAPRRLYTPRTSRTLAPRLDPEAVGRTTESIARFFGTGRYLLVQTLLVLTWIVLNLFAVGLRWDPYPFILLNLAFS TQASYAAPLILLAQNRQEKRDRAVFEEDRRRAAQTKADTEYNARELAALRLAIGEVPTRDYLRHELDSLRALLAELQPTD PDVAQPRVADEAEQHAKKSG >Mature_179_residues SKPFAPRRLYTPRTSRTLAPRLDPEAVGRTTESIARFFGTGRYLLVQTLLVLTWIVLNLFAVGLRWDPYPFILLNLAFST QASYAAPLILLAQNRQEKRDRAVFEEDRRRAAQTKADTEYNARELAALRLAIGEVPTRDYLRHELDSLRALLAELQPTDP DVAQPRVADEAEQHAKKSG
Specific function: Unknown
COG id: COG4420
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20446; Mature: 20314
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPFAPRRLYTPRTSRTLAPRLDPEAVGRTTESIARFFGTGRYLLVQTLLVLTWIVLNL CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FAVGLRWDPYPFILLNLAFSTQASYAAPLILLAQNRQEKRDRAVFEEDRRRAAQTKADTE HHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC YNARELAALRLAIGEVPTRDYLRHELDSLRALLAELQPTDPDVAQPRVADEAEQHAKKSG CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure SKPFAPRRLYTPRTSRTLAPRLDPEAVGRTTESIARFFGTGRYLLVQTLLVLTWIVLNL CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FAVGLRWDPYPFILLNLAFSTQASYAAPLILLAQNRQEKRDRAVFEEDRRRAAQTKADTE HHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC YNARELAALRLAIGEVPTRDYLRHELDSLRALLAELQPTDPDVAQPRVADEAEQHAKKSG CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA