Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637159
Identifier: 121637159
GI number: 121637159
Start: 1402684
End: 1403919
Strand: Reverse
Name: 121637159
Synonym: BCG_1290c
Alternate gene names: NA
Gene position: 1403919-1402684 (Counterclockwise)
Preceding gene: 121637160
Following gene: 121637158
Centisome position: 32.09
GC content: 69.74
Gene sequence:
>1236_bases GTGCACATTGGGGGACGCTGGGGTGCACGCCCGGCCGTCGCTGCAGTGCGGCGGGGAGCTTGTCGCCTAACGCGGGCGCC GGCATTCGGCGTGGCAGCGATTGCCCCGTTGGTATTCGCCAGTGCGGTCGGCGGCGCGGCTCCGGTATTCCCCGGGAGAA CCGCGCCGGTGCACGCCGTTATCACCCCGGTGGCCGCGGTCGCCGCGTCCGGCATAGACCTGTCCGGTCCGGTCGTCATC GCCATGAAGCGCCCGCCGACCAGCTTCCGCGTGGCGGTAGCTACCATACCGGCTCCACCACCACCGATGATCGTGAATTC GCCTGGTGCGCTTGGCATTCCGGCCATGGCACTGTCCGCCTACCGCAACGCCGAGCTGAAGATGGCCGCTGCCGCCCCTG GCTGTGGCGTCAGTTGGAACTTGCTGGCCGGGATTGGGCGCATCGAGTCGATGCACGCAAACGGCGGCGCCACCGACGCG CGCGGCACCGCGATCCAGCCGATCTACGGCCCAACGCTGGACGGCACCCTGCCAGGCAACGAGATCATCATCCAAAGCAG CGTCGGCAATCGCGTCACGTACGCCCGCGCGATGGGGCCAATGCAGTTCTTGCCCGGCACTTGGGCTCGGTACGCCACCG ACGGCGATGACGACGGTGTGGCTGACCCGCAGAACCTGTTCGACTCCACGTTGGCCGCAGCCCGCTACCTGTGTAGCGGT GGGCTCAACCTGCGCGACCCGGCGCAGGTCATGGCCGCGCTCCTGCGCTACAACAACTCGATGCCTTACGCCCAGAACGT ACTGGGCTGGGCCGCCGGCTACGCCACCGGTGTGTTCCCGGTTGACTTGCCCCCGATCACCGGTCCGCCACCACCACTCG GCGACGCGCACCTCGAGAATCCGGAGGGTCTCGGGCCCGGCTTGCCGATCAATGTCAACGGCCTGACCGCCGATGGCCCC ATGGCGCACCTGCCGCTGATCGACTTGACCCCGCGCCAGGCGGCGCTCAATCCACCGCCGATGTTCCCGTGGATGGCACC TGACCCATCGGCGCCGATGCCCGGCTGCACGCTGATCTGCATTGGCTCACATGGCCCGCCAGTGGGCGCGCCGCCGTTCC CGCCTACCGCTCCCCCACCTCCATTCCTACCTGCCGCTCCCCCACCTCCGGATCCATTGGCCGGCCCGCCTGGCGACGCG GGCCTGGCGCCGCCGGCGCCGGCTCCTGCCGGCTGA
Upstream 100 bases:
>100_bases TCCCGTGACAAGAGTTATGTATGGTGATCTAGTTCACGAAACGAAGAAAGAAGCTAAGAAGACATAGGTTTCCGACGGCT CACACACTGAGGACGGTCGA
Downstream 100 bases:
>100_bases CCACTCGGCCGTATGCCAAGCCGCCTACACTCGGCGGTGATGTCCGGAACTCGTGATGGCGACCTGAACGCGGCGATACG CACCGCGCTGGGCAAGGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Membrane-Bound Lytic Murein Transglycosylase B-Like Protein; Membrane-Bound Lytic Murein Transglycosylase B; Lytic Transglycosylase Catalytic; Lipoprotein LpqU; NLP/P60-Family Secreted Protein; Membrane-Bound Lytic Murein Transglycosylase B-Like; NLP/P60 Protein; Transglycosylase; LpqU Protein; Peptidase; LOW QUALITY PROTEIN Secreted Protein; Membrane-Bound Lytic Murein Transglycosylase B Protein; Membrane-Bound Lytic Murein Transglycosylase; Cell Wall-Associated Hydrolase Invasion-Associated Protein
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MHIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVGGAAPVFPGRTAPVHAVITPVAAVAASGIDLSGPVVI AMKRPPTSFRVAVATIPAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDA RGTAIQPIYGPTLDGTLPGNEIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSG GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLENPEGLGPGLPINVNGLTADGP MAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGCTLICIGSHGPPVGAPPFPPTAPPPPFLPAAPPPPDPLAGPPGDA GLAPPAPAPAG
Sequences:
>Translated_411_residues MHIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVGGAAPVFPGRTAPVHAVITPVAAVAASGIDLSGPVVI AMKRPPTSFRVAVATIPAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDA RGTAIQPIYGPTLDGTLPGNEIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSG GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLENPEGLGPGLPINVNGLTADGP MAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGCTLICIGSHGPPVGAPPFPPTAPPPPFLPAAPPPPDPLAGPPGDA GLAPPAPAPAG >Mature_411_residues MHIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVGGAAPVFPGRTAPVHAVITPVAAVAASGIDLSGPVVI AMKRPPTSFRVAVATIPAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDA RGTAIQPIYGPTLDGTLPGNEIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSG GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLENPEGLGPGLPINVNGLTADGP MAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGCTLICIGSHGPPVGAPPFPPTAPPPPFLPAAPPPPDPLAGPPGDA GLAPPAPAPAG
Specific function: Unknown
COG id: COG2951
COG function: function code M; Membrane-bound lytic murein transglycosylase B
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41397; Mature: 41397
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: PS00032 ANTENNAPEDIA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVGGAAPVFPGRTAPVHAV CCCCCCCCCCHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH ITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATIPAPPPPMIVNSPGALGIPAMALSA HHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCEEEECCCCCCHHHHHHHH YRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGN HCCCCEEEEECCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCEECCCCCCCCCCCCCCC EIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSG EEEEECCCCCEEEEHHHCCCHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHC GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLEN CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCC PEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGCTLIC CCCCCCCCEEEECCEECCCCEEECCEEECCCCHHCCCCCCCCCCCCCCCCCCCCCEEEEE IGSHGPPVGAPPFPPTAPPPPFLPAAPPPPDPLAGPPGDAGLAPPAPAPAG ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVGGAAPVFPGRTAPVHAV CCCCCCCCCCHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH ITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATIPAPPPPMIVNSPGALGIPAMALSA HHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCEEEECCCCCCHHHHHHHH YRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGN HCCCCEEEEECCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCEECCCCCCCCCCCCCCC EIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSG EEEEECCCCCEEEEHHHCCCHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHC GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLEN CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCC PEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGCTLIC CCCCCCCCEEEECCEECCCCEEECCEEECCCCHHCCCCCCCCCCCCCCCCCCCCCEEEEE IGSHGPPVGAPPFPPTAPPPPFLPAAPPPPDPLAGPPGDAGLAPPAPAPAG ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA