Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637133
Identifier: 121637133
GI number: 121637133
Start: 1376655
End: 1378343
Strand: Reverse
Name: 121637133
Synonym: BCG_1264c
Alternate gene names: NA
Gene position: 1378343-1376655 (Counterclockwise)
Preceding gene: 121637141
Following gene: 121637132
Centisome position: 31.51
GC content: 70.46
Gene sequence:
>1689_bases ATGCGCGTCTGGAAACACGTGGAGGCGGCCGTCGACAGTCCGGATCGGTGCGGGGTGGTGCTGGTCGGGCCACACGGCGT CGGCAAGACGCTGCTGGCGCAACTGGCTGCCGAGCAGGTCATGTCCGAGGACGGCAGGAGCGGCCGGGCTCGCTGGGTGG TGGGAACCGCTCCAGGGCGGGCCATCCCGTTCGGCGCTTTCCGCCATTTGATCAGCCTGCCCGCCTCCGGAGCCGACATT GGGCGGCCCGCGGCGCTGCTGCGGGCGGCGCGTAGTTCCCTGACCGGTGATGCTGGCGATCTGCTGCTGGTGGTCGACGA CGCGCACAACCTGGATCCGCTGTCGGCCACCTTGGTGTACCAGCTGGCGCGGGCCGGGGCGGCGCGGCTGGTGGTCACCG TCGCCTCGGAGGCCGAGCCACCGGACGCTATAGCTGCGCTCTGGTCCGATGACCTGCTCACCCGGGTCGCCATCGAGCCG CTCGACAGGGCCCAAACCGCGGCGTTCGTGGAGTCGGCGCTGGACGCGACACTGGACGTCGCCGACGCCGACGAGCTCTT TCGGCGCAGCCTTGGCAACCCGTTGTATCTGCGCCACCTCATCGACGGCGGTGGTCTCGAACACGTGGACGGCCGGTGGC GCTGTCGAGACGAGGATCGTCGGCCGCTGTCCGGCGTGATCGACGAGTACCTGTGCGCCCTGCCGGAACCGGCCCGCGCC GTTGTCGACTACCTCGCCATCGCCGAACCGTTGGCGCGCACCGACCTGGTGGCCCTGGTCGGTGGCGAGCAGTTGGACAC GCTCGGCCAAGCCGAAGCCGCCGGCGCGGTGCGGGTGGGTCCCGACAGCGATACCAGCGAGATTTTTGTCGGCCATCCGC TGTACGCCGACCGCGCACGCGCCGTATTGACGGCCGAGCACGCGCATGCATTGCGCGTGTCGCTGGTCGCGCAGCTGGCC AAGCACCCATCCGACCATGTCAGCGATCAGTTACGGCTGTCCTCACTGGCCATCGACGTCCCCGCCAGTGCTACCCCGGC CGCGGTCACGGATGCGGCGACCGCAGCCGGGCAGGCCCTGCGGCTCGGCGACGTCCGGCTTGCCGAACGGTTGGCGCGGG CAGCGCTGGATAGGTCGGACGCCCTGGCGGCACGCCTGCCCTTGGCTTACGCACTCGGTTGGCAGGGTCGCGGTCGCGAA GCTGACGCGGTGCTGGCGGCGGTGAATCCCGCCGAATTGACCGAGACCGAGCTGATGGCCTGGGCGATACCCCGGGCGGC GAATCGGTTCTGGATGCTCAACGAGCCCGAGCGCGCCACGGCGTTTCTGCAGACGACCCGCAGCCGAGTGACCGAGCCCA CGGCCCGCAGCACCCTGGATGCGCTGGCGGCCACGTTTGCGATGAACTCCGGAAACTTGCCGCGGGCCATCACGCTGGCC ACCGAGGTGCTATCCGGACCGGCTGCCGACGACATGGCCGTGGCCTGGGCCGCCAGCGCTGCCGCGTTATCATCGGCACG AATGGGCCGGTTCGGCGACGTTGACCGGCTGGCCGAACGGGCGTCGGCCGCCGAACATCCGGGGCTGCTGCGGTTCACCG TGGGCCTGGCTCAGATCACGTCGCTGCTGCTGGCAGGCGACGTCGCGCCGGCTCAGGAGCTGGCCAAGCGGTTCACCGAC TTCGCCTAG
Upstream 100 bases:
>100_bases CGACATACACCAGAACGTAGACCACCGATGTGAACCGCGTACATTTTTGGCCTATCCCCCGCTCGAATGTCGTTGGGCGC AACCGCCATAAAATCCGGCG
Downstream 100 bases:
>100_bases CTGCAGCAACCTGGCCGGTCCATCGGTGAAGTGTTGTTGGCGTACGTACTGATCACCAAAGGCGAATTCGGCGCCGCGGC ATCGATGCTGGAGCCGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Regulatory Protein LuxR; TPR Repeat-Containing Protein; Transcriptional Regulator; Response Regulator Receiver Protein; Transcriptional Regulator LuxR Family Protein; Transcriptional Regulator LuxR Family; LuxR Transcriptional Regulator; AAA ATPase; Luxr Family Transcriptional Regulator
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MRVWKHVEAAVDSPDRCGVVLVGPHGVGKTLLAQLAAEQVMSEDGRSGRARWVVGTAPGRAIPFGAFRHLISLPASGADI GRPAALLRAARSSLTGDAGDLLLVVDDAHNLDPLSATLVYQLARAGAARLVVTVASEAEPPDAIAALWSDDLLTRVAIEP LDRAQTAAFVESALDATLDVADADELFRRSLGNPLYLRHLIDGGGLEHVDGRWRCRDEDRRPLSGVIDEYLCALPEPARA VVDYLAIAEPLARTDLVALVGGEQLDTLGQAEAAGAVRVGPDSDTSEIFVGHPLYADRARAVLTAEHAHALRVSLVAQLA KHPSDHVSDQLRLSSLAIDVPASATPAAVTDAATAAGQALRLGDVRLAERLARAALDRSDALAARLPLAYALGWQGRGRE ADAVLAAVNPAELTETELMAWAIPRAANRFWMLNEPERATAFLQTTRSRVTEPTARSTLDALAATFAMNSGNLPRAITLA TEVLSGPAADDMAVAWAASAAALSSARMGRFGDVDRLAERASAAEHPGLLRFTVGLAQITSLLLAGDVAPAQELAKRFTD FA
Sequences:
>Translated_562_residues MRVWKHVEAAVDSPDRCGVVLVGPHGVGKTLLAQLAAEQVMSEDGRSGRARWVVGTAPGRAIPFGAFRHLISLPASGADI GRPAALLRAARSSLTGDAGDLLLVVDDAHNLDPLSATLVYQLARAGAARLVVTVASEAEPPDAIAALWSDDLLTRVAIEP LDRAQTAAFVESALDATLDVADADELFRRSLGNPLYLRHLIDGGGLEHVDGRWRCRDEDRRPLSGVIDEYLCALPEPARA VVDYLAIAEPLARTDLVALVGGEQLDTLGQAEAAGAVRVGPDSDTSEIFVGHPLYADRARAVLTAEHAHALRVSLVAQLA KHPSDHVSDQLRLSSLAIDVPASATPAAVTDAATAAGQALRLGDVRLAERLARAALDRSDALAARLPLAYALGWQGRGRE ADAVLAAVNPAELTETELMAWAIPRAANRFWMLNEPERATAFLQTTRSRVTEPTARSTLDALAATFAMNSGNLPRAITLA TEVLSGPAADDMAVAWAASAAALSSARMGRFGDVDRLAERASAAEHPGLLRFTVGLAQITSLLLAGDVAPAQELAKRFTD FA >Mature_562_residues MRVWKHVEAAVDSPDRCGVVLVGPHGVGKTLLAQLAAEQVMSEDGRSGRARWVVGTAPGRAIPFGAFRHLISLPASGADI GRPAALLRAARSSLTGDAGDLLLVVDDAHNLDPLSATLVYQLARAGAARLVVTVASEAEPPDAIAALWSDDLLTRVAIEP LDRAQTAAFVESALDATLDVADADELFRRSLGNPLYLRHLIDGGGLEHVDGRWRCRDEDRRPLSGVIDEYLCALPEPARA VVDYLAIAEPLARTDLVALVGGEQLDTLGQAEAAGAVRVGPDSDTSEIFVGHPLYADRARAVLTAEHAHALRVSLVAQLA KHPSDHVSDQLRLSSLAIDVPASATPAAVTDAATAAGQALRLGDVRLAERLARAALDRSDALAARLPLAYALGWQGRGRE ADAVLAAVNPAELTETELMAWAIPRAANRFWMLNEPERATAFLQTTRSRVTEPTARSTLDALAATFAMNSGNLPRAITLA TEVLSGPAADDMAVAWAASAAALSSARMGRFGDVDRLAERASAAEHPGLLRFTVGLAQITSLLLAGDVAPAQELAKRFTD FA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59220; Mature: 59220
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVWKHVEAAVDSPDRCGVVLVGPHGVGKTLLAQLAAEQVMSEDGRSGRARWVVGTAPGR CCHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC AIPFGAFRHLISLPASGADIGRPAALLRAARSSLTGDAGDLLLVVDDAHNLDPLSATLVY CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHH QLARAGAARLVVTVASEAEPPDAIAALWSDDLLTRVAIEPLDRAQTAAFVESALDATLDV HHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC ADADELFRRSLGNPLYLRHLIDGGGLEHVDGRWRCRDEDRRPLSGVIDEYLCALPEPARA CCHHHHHHHHCCCCEEEHHHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCHHHH VVDYLAIAEPLARTDLVALVGGEQLDTLGQAEAAGAVRVGPDSDTSEIFVGHPLYADRAR HHHHHHHHHHHHHHCEEEEECCCHHHHHCCHHHCCEEEECCCCCCCCEEECCCCHHHHHH AVLTAEHAHALRVSLVAQLAKHPSDHVSDQLRLSSLAIDVPASATPAAVTDAATAAGQAL HHEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHCCCHH RLGDVRLAERLARAALDRSDALAARLPLAYALGWQGRGREADAVLAAVNPAELTETELMA HHHHHHHHHHHHHHHHCCHHHHHHHCCHHHEECCCCCCCCCCEEEEECCHHHHHHHHHHH WAIPRAANRFWMLNEPERATAFLQTTRSRVTEPTARSTLDALAATFAMNSGNLPRAITLA HHCCHHCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH TEVLSGPAADDMAVAWAASAAALSSARMGRFGDVDRLAERASAAEHPGLLRFTVGLAQIT HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHH SLLLAGDVAPAQELAKRFTDFA HHHHHCCCCCHHHHHHHHCCCC >Mature Secondary Structure MRVWKHVEAAVDSPDRCGVVLVGPHGVGKTLLAQLAAEQVMSEDGRSGRARWVVGTAPGR CCHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC AIPFGAFRHLISLPASGADIGRPAALLRAARSSLTGDAGDLLLVVDDAHNLDPLSATLVY CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHH QLARAGAARLVVTVASEAEPPDAIAALWSDDLLTRVAIEPLDRAQTAAFVESALDATLDV HHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC ADADELFRRSLGNPLYLRHLIDGGGLEHVDGRWRCRDEDRRPLSGVIDEYLCALPEPARA CCHHHHHHHHCCCCEEEHHHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCHHHH VVDYLAIAEPLARTDLVALVGGEQLDTLGQAEAAGAVRVGPDSDTSEIFVGHPLYADRAR HHHHHHHHHHHHHHCEEEEECCCHHHHHCCHHHCCEEEECCCCCCCCEEECCCCHHHHHH AVLTAEHAHALRVSLVAQLAKHPSDHVSDQLRLSSLAIDVPASATPAAVTDAATAAGQAL HHEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHCCCHH RLGDVRLAERLARAALDRSDALAARLPLAYALGWQGRGREADAVLAAVNPAELTETELMA HHHHHHHHHHHHHHHHCCHHHHHHHCCHHHEECCCCCCCCCCEEEEECCHHHHHHHHHHH WAIPRAANRFWMLNEPERATAFLQTTRSRVTEPTARSTLDALAATFAMNSGNLPRAITLA HHCCHHCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH TEVLSGPAADDMAVAWAASAAALSSARMGRFGDVDRLAERASAAEHPGLLRFTVGLAQIT HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHH SLLLAGDVAPAQELAKRFTDFA HHHHHCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA