Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637042
Identifier: 121637042
GI number: 121637042
Start: 1268624
End: 1269607
Strand: Reverse
Name: 121637042
Synonym: BCG_1171c
Alternate gene names: NA
Gene position: 1269607-1268624 (Counterclockwise)
Preceding gene: 121637048
Following gene: 121637040
Centisome position: 29.02
GC content: 67.58
Gene sequence:
>984_bases GTGTCAGCGCAGCGGGCGAGGTCGGCGGTACAGGCAAGTCACCGCTCGATTCACCCCCACATCCCAGGTGTGCCGTGGTG GGCTGCCATCCTGATCGCCGTCACCGCGACGGCGATCGGGTATGCAATCGACGCCGGATCGGGCCACAAGGCGCTAACCC TCGTCTTTACCGGCTGCTATATCGCCGGCTGCGTGGGGGCGGTCCTGGCCGTCCGGCAGTCGGACCTGTTCACCGCGCTC GTCCAGCCGCCACTGATACTTTTCTGCGCCGTGCCCGGGGCCTACTGGCTGTTCCACGGGGGCACGATCGGCAAGTTCAA AGACCTCTTGATCAACTGCGGCTACTCGCTCATCGAACGTTTCCCGCTGATGCTGGGCACGGCTGCCGGCGTGCTGCTGA TCGGACTGGTCAGGTGGTATCTCGGGACGGCTCTGTTCGACAGCATCGCCAGGAAGCTCAGCTCGCTGATGACCGGCGAT TCGGACGACGACGGCGGCCGGCGGTCGGCCCAGCGGCCTGCCCGTACTCGTTCCCGACACGCCCGACCCCCGTCGGAGGA CAACCGCGAACCCATAGCCGAGCGTCGATCGCGCCGCCGCCCTAGGCCGCAGAATGATCCGCACCCGCGCCGCAATGCCC ACGAACGGCCGGCACCGCGCAGCAGCCGCTTCGATTCTTACCGCAGCTACCAGCCGTCCGAACCCTCCGGGCCTGCCGAG CCCGTCAACCGGTACGAACGTCGGGGTGCTCGATACCAGCCCTATGCGCGCTACGAGCCCACCTACGAGCCCCAACGCCG ACGCGCCCGTCCCAGCGAGCCAACCAACCCGACACACCATCCGATCTCGCAGGTCCGCTACCGCGGGTCAGCTACTCGCG ACGCGCGGCGGGACAACTACCGCGAGGAGCAGCGGTTCGATCGGCGGGATCGTTCGCGGGCACCGCGCAGACCACCGGCT GAATCCTGGGAATACGACGTCTAA
Upstream 100 bases:
>100_bases ACGTTGGGCAGGCCCACGATCCCCAGGCTCAAGCTCACAGAGAGCCAAGTTTAAGGCGAGGCGGTGCCGCCTTCGGCGCC ATTGCCGGTACGGTCGACGT
Downstream 100 bases:
>100_bases CCGTGAGCGGATGTGCTCAGCGAGGTGAGCGGAGCTCCCGGGGCAATGCGAACACCAACGTCTCGTTGGCCGTTGTCACC GGTTGCACGATGTCGTAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MSAQRARSAVQASHRSIHPHIPGVPWWAAILIAVTATAIGYAIDAGSGHKALTLVFTGCYIAGCVGAVLAVRQSDLFTAL VQPPLILFCAVPGAYWLFHGGTIGKFKDLLINCGYSLIERFPLMLGTAAGVLLIGLVRWYLGTALFDSIARKLSSLMTGD SDDDGGRRSAQRPARTRSRHARPPSEDNREPIAERRSRRRPRPQNDPHPRRNAHERPAPRSSRFDSYRSYQPSEPSGPAE PVNRYERRGARYQPYARYEPTYEPQRRRARPSEPTNPTHHPISQVRYRGSATRDARRDNYREEQRFDRRDRSRAPRRPPA ESWEYDV
Sequences:
>Translated_327_residues MSAQRARSAVQASHRSIHPHIPGVPWWAAILIAVTATAIGYAIDAGSGHKALTLVFTGCYIAGCVGAVLAVRQSDLFTAL VQPPLILFCAVPGAYWLFHGGTIGKFKDLLINCGYSLIERFPLMLGTAAGVLLIGLVRWYLGTALFDSIARKLSSLMTGD SDDDGGRRSAQRPARTRSRHARPPSEDNREPIAERRSRRRPRPQNDPHPRRNAHERPAPRSSRFDSYRSYQPSEPSGPAE PVNRYERRGARYQPYARYEPTYEPQRRRARPSEPTNPTHHPISQVRYRGSATRDARRDNYREEQRFDRRDRSRAPRRPPA ESWEYDV >Mature_326_residues SAQRARSAVQASHRSIHPHIPGVPWWAAILIAVTATAIGYAIDAGSGHKALTLVFTGCYIAGCVGAVLAVRQSDLFTALV QPPLILFCAVPGAYWLFHGGTIGKFKDLLINCGYSLIERFPLMLGTAAGVLLIGLVRWYLGTALFDSIARKLSSLMTGDS DDDGGRRSAQRPARTRSRHARPPSEDNREPIAERRSRRRPRPQNDPHPRRNAHERPAPRSSRFDSYRSYQPSEPSGPAEP VNRYERRGARYQPYARYEPTYEPQRRRARPSEPTNPTHHPISQVRYRGSATRDARRDNYREEQRFDRRDRSRAPRRPPAE SWEYDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37017; Mature: 36886
Theoretical pI: Translated: 10.97; Mature: 10.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQRARSAVQASHRSIHPHIPGVPWWAAILIAVTATAIGYAIDAGSGHKALTLVFTGCY CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHH IAGCVGAVLAVRQSDLFTALVQPPLILFCAVPGAYWLFHGGTIGKFKDLLINCGYSLIER HHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCEEHCCCCCHHHHHHHHHHCCHHHHHH FPLMLGTAAGVLLIGLVRWYLGTALFDSIARKLSSLMTGDSDDDGGRRSAQRPARTRSRH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHHHC ARPPSEDNREPIAERRSRRRPRPQNDPHPRRNAHERPAPRSSRFDSYRSYQPSEPSGPAE CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHH PVNRYERRGARYQPYARYEPTYEPQRRRARPSEPTNPTHHPISQVRYRGSATRDARRDNY HHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHH REEQRFDRRDRSRAPRRPPAESWEYDV HHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SAQRARSAVQASHRSIHPHIPGVPWWAAILIAVTATAIGYAIDAGSGHKALTLVFTGCY CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHH IAGCVGAVLAVRQSDLFTALVQPPLILFCAVPGAYWLFHGGTIGKFKDLLINCGYSLIER HHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCEEHCCCCCHHHHHHHHHHCCHHHHHH FPLMLGTAAGVLLIGLVRWYLGTALFDSIARKLSSLMTGDSDDDGGRRSAQRPARTRSRH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHHHC ARPPSEDNREPIAERRSRRRPRPQNDPHPRRNAHERPAPRSSRFDSYRSYQPSEPSGPAE CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHH PVNRYERRGARYQPYARYEPTYEPQRRRARPSEPTNPTHHPISQVRYRGSATRDARRDNY HHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHH REEQRFDRRDRSRAPRRPPAESWEYDV HHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA