Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121636977
Identifier: 121636977
GI number: 121636977
Start: 1201525
End: 1202640
Strand: Reverse
Name: 121636977
Synonym: BCG_1106c
Alternate gene names: NA
Gene position: 1202640-1201525 (Counterclockwise)
Preceding gene: 121636980
Following gene: 121636975
Centisome position: 27.49
GC content: 61.92
Gene sequence:
>1116_bases GTGCAAGCGTCGGATCGCACGTGGCAATCGAACTTCATCCGTAGATGGTACTTCACTGAAACAGTAGAGTATCGTCCCTT AGTGAAGTATGATGCCTCCATGTCTTGGGCCGAACGCACCGTGAGTGCGCTGGAAGGCGCGTTTCGCAGCGAAGTGCGCG CACGACGCGTAAACGGCCCTCATCGCGACGTGATTGTGTCGCTCGACGGCGCAGAGTTCCTGGTTCGCTGGCTCACGACT GGTTGGCCCCGTCAGGTAGCCGAGGCACTCCACGCCACATCCCGGCCCGACATTTTGGCTGCACCCACGATGTCTCCTGG TGCCCGGAAGGCGGCACATGACGCCGGTGTTGGGTGGGTGGACGAGTCGGGCGCTGCCGATATCCACTACCGAAACACAT CAACTGGAACCACTCTGGTGATCGAGACGAAAGGCGCGCCACCTGCCCCACTCGACGCGCGCATAGGCTGGCGCCGCGCC ACACTTGCCGTATGTGAAGCGCTGCTGGCGAACATCACCGGTCCAACTGTCGCCTCGGTTGTAGAGGCCACCGGTCTCTC GATGGGAAGCAGCGCTCAGGCGTTGAAGTTTCTCGAAAAAAACGGCCATCTGGCCAGTGCCACTGCCCGCGGCCCGAAAT CGGCGCGCCTGATCGTTGATCGCGATGCGCTGTTGGATGCATACGCTGAGGCAGCAGACAAGCTTCGGTCGCCGATTTCT ATTTCGACTGGTGTGCTGTGGCGCGATCCGACTGCCGGCGTGGTCAAGGCCGGCCAGTTGTGGGATGCCGCAGGCATTGA GTGGGCAGCCACAAGCGCGTTGTCGGCGAGCCTGCTCGCGCCAATGCAGACGGAAATAGCTCCGATGGAAATCTACGTGC CCGGGCGATCATGGAGCGATCTTCGCCGTGCAGCAATGGCTGCGGGATTGCAGGAAATCGCCGGCGGTCGGTTGATATTG CGCTTCTTCCCGACCCCAGCGTGCGCCCGGCTGACCGAACAGAACCTGCAGGGGTTTAGGTCGATGTTATGGCCGAGGGT ATACGCCGACCTACGCACGGCCGGCGTCCGCGGCGAAGACGCGGCGGAACATCTACGCGAGGCGATGACCAAATGA
Upstream 100 bases:
>100_bases CGACTGGTGTTTGGCATGCGCGCCCACCCGGACAGCGCCGCCTTGCTGACCCGTGCCGACGACCTGGAGGAGCTGATCGG GTTCGCGGCCCGCCAGCGAA
Downstream 100 bases:
>100_bases ACGACGAAGAGCCACCGCGCTCTGCTGCGGCGCGACGGGCGGCCGAATTGGCTCTCGTGCGAGTGGTGCATCACTACGGG AGGGAGACCCTCCACAGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MQASDRTWQSNFIRRWYFTETVEYRPLVKYDASMSWAERTVSALEGAFRSEVRARRVNGPHRDVIVSLDGAEFLVRWLTT GWPRQVAEALHATSRPDILAAPTMSPGARKAAHDAGVGWVDESGAADIHYRNTSTGTTLVIETKGAPPAPLDARIGWRRA TLAVCEALLANITGPTVASVVEATGLSMGSSAQALKFLEKNGHLASATARGPKSARLIVDRDALLDAYAEAADKLRSPIS ISTGVLWRDPTAGVVKAGQLWDAAGIEWAATSALSASLLAPMQTEIAPMEIYVPGRSWSDLRRAAMAAGLQEIAGGRLIL RFFPTPACARLTEQNLQGFRSMLWPRVYADLRTAGVRGEDAAEHLREAMTK
Sequences:
>Translated_371_residues MQASDRTWQSNFIRRWYFTETVEYRPLVKYDASMSWAERTVSALEGAFRSEVRARRVNGPHRDVIVSLDGAEFLVRWLTT GWPRQVAEALHATSRPDILAAPTMSPGARKAAHDAGVGWVDESGAADIHYRNTSTGTTLVIETKGAPPAPLDARIGWRRA TLAVCEALLANITGPTVASVVEATGLSMGSSAQALKFLEKNGHLASATARGPKSARLIVDRDALLDAYAEAADKLRSPIS ISTGVLWRDPTAGVVKAGQLWDAAGIEWAATSALSASLLAPMQTEIAPMEIYVPGRSWSDLRRAAMAAGLQEIAGGRLIL RFFPTPACARLTEQNLQGFRSMLWPRVYADLRTAGVRGEDAAEHLREAMTK >Mature_371_residues MQASDRTWQSNFIRRWYFTETVEYRPLVKYDASMSWAERTVSALEGAFRSEVRARRVNGPHRDVIVSLDGAEFLVRWLTT GWPRQVAEALHATSRPDILAAPTMSPGARKAAHDAGVGWVDESGAADIHYRNTSTGTTLVIETKGAPPAPLDARIGWRRA TLAVCEALLANITGPTVASVVEATGLSMGSSAQALKFLEKNGHLASATARGPKSARLIVDRDALLDAYAEAADKLRSPIS ISTGVLWRDPTAGVVKAGQLWDAAGIEWAATSALSASLLAPMQTEIAPMEIYVPGRSWSDLRRAAMAAGLQEIAGGRLIL RFFPTPACARLTEQNLQGFRSMLWPRVYADLRTAGVRGEDAAEHLREAMTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40235; Mature: 40235
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQASDRTWQSNFIRRWYFTETVEYRPLVKYDASMSWAERTVSALEGAFRSEVRARRVNGP CCCCCCCHHHHHHHHHHEECCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC HRDVIVSLDGAEFLVRWLTTGWPRQVAEALHATSRPDILAAPTMSPGARKAAHDAGVGWV CCEEEEEECHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHCCCCCC DESGAADIHYRNTSTGTTLVIETKGAPPAPLDARIGWRRATLAVCEALLANITGPTVASV CCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH VEATGLSMGSSAQALKFLEKNGHLASATARGPKSARLIVDRDALLDAYAEAADKLRSPIS HHHHCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCE ISTGVLWRDPTAGVVKAGQLWDAAGIEWAATSALSASLLAPMQTEIAPMEIYVPGRSWSD ECCCEEEECCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCEEEEECCCCHHH LRRAAMAAGLQEIAGGRLILRFFPTPACARLTEQNLQGFRSMLWPRVYADLRTAGVRGED HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH AAEHLREAMTK HHHHHHHHHCC >Mature Secondary Structure MQASDRTWQSNFIRRWYFTETVEYRPLVKYDASMSWAERTVSALEGAFRSEVRARRVNGP CCCCCCCHHHHHHHHHHEECCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC HRDVIVSLDGAEFLVRWLTTGWPRQVAEALHATSRPDILAAPTMSPGARKAAHDAGVGWV CCEEEEEECHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHCCCCCC DESGAADIHYRNTSTGTTLVIETKGAPPAPLDARIGWRRATLAVCEALLANITGPTVASV CCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH VEATGLSMGSSAQALKFLEKNGHLASATARGPKSARLIVDRDALLDAYAEAADKLRSPIS HHHHCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCE ISTGVLWRDPTAGVVKAGQLWDAAGIEWAATSALSASLLAPMQTEIAPMEIYVPGRSWSD ECCCEEEECCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCEEEEECCCCHHH LRRAAMAAGLQEIAGGRLILRFFPTPACARLTEQNLQGFRSMLWPRVYADLRTAGVRGED HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH AAEHLREAMTK HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA