Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636800
Identifier: 121636800
GI number: 121636800
Start: 1006535
End: 1007323
Strand: Direct
Name: 121636800
Synonym: BCG_0929
Alternate gene names: NA
Gene position: 1006535-1007323 (Clockwise)
Preceding gene: 121636796
Following gene: 121636803
Centisome position: 23.01
GC content: 67.55
Gene sequence:
>789_bases GTGACCGGGCCCACCGAGGAGTCTGCCGTGGCGACTGTGGCCGACTGGCCCGAGGGGTTAGCGGCGGTGCTCAGGGGTGC GGCCGACCAAGCCAGGGCCGCCGTTGTGGAGTTCAGCGGCCCGGAGGCGGTGGGAGACTACCTGGGCGTCAGCTACGAGG ATGGCAACGCCGCCACCCACCGGTTCATCGCGCATCTGCCTGGCTACCAGGGATGGCAATGGGCCGTCGTGGTGGCGAGC TATTCCGGTGCGGACCATGCCACGATCAGCGAGGTGGTGCTGGTCCCGGGGCCTACCGCACTGCTGGCGCCGGATTGGGT GCCGTGGGAGCAACGGGTGCGGCCGGGAGACTTGAGCCCCGGAGATCTGCTGGCGCCGGCGAAGGATGATCCGCGGCTGG TTCCGGGTTACACCGCCAGTGGTGATGCGCAGGTTGACGAGACCGCCGCAGAGATCGGGTTGGGTCGGCGCTGGGTGATG AGCGCCTGGGGTCGCGCCCAGTCGGCCCAACGGTGGCACGACGGCGACTATGGTCCCGGCTCTGCTATGGCGCGGTCGAC GAAACGCGTCTGCCGCGACTGCGGTTTCTTCCTGCCGCTGGCCGGGTCGCTGGGCGCAATGTTCGGGGTATGTGGTAACG AACTGTCCGCTGACGGGCATGTTGTCGATAGGCAATACGGCTGTGGCGCCCATTCCGACACCACTGCGCCGGCCGGTGGC AGCACACCCATTTATGAGCCGTACGACGACGGTGTGCTCGACATCATCGAGAAGCCGGCTGAATCATAG
Upstream 100 bases:
>100_bases CAATTCTGTCCTATCCGGACTCCTGGCGTAGCCAACCGGGTGTGGCTTGCCGGCCGTGTCTTCCGGCAGTATTGGAAGCG CGTTACAGAGAGGGGACAGC
Downstream 100 bases:
>100_bases GTTTTCTCTCACCCGCTGTTCCCTACTTTTTTTGGGGGGGCACCAGTCGAAGAAACCCGACTGATTATCACCCGTATTGA ACACTCCCGAGCTGTTGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MTGPTEESAVATVADWPEGLAAVLRGAADQARAAVVEFSGPEAVGDYLGVSYEDGNAATHRFIAHLPGYQGWQWAVVVAS YSGADHATISEVVLVPGPTALLAPDWVPWEQRVRPGDLSPGDLLAPAKDDPRLVPGYTASGDAQVDETAAEIGLGRRWVM SAWGRAQSAQRWHDGDYGPGSAMARSTKRVCRDCGFFLPLAGSLGAMFGVCGNELSADGHVVDRQYGCGAHSDTTAPAGG STPIYEPYDDGVLDIIEKPAES
Sequences:
>Translated_262_residues MTGPTEESAVATVADWPEGLAAVLRGAADQARAAVVEFSGPEAVGDYLGVSYEDGNAATHRFIAHLPGYQGWQWAVVVAS YSGADHATISEVVLVPGPTALLAPDWVPWEQRVRPGDLSPGDLLAPAKDDPRLVPGYTASGDAQVDETAAEIGLGRRWVM SAWGRAQSAQRWHDGDYGPGSAMARSTKRVCRDCGFFLPLAGSLGAMFGVCGNELSADGHVVDRQYGCGAHSDTTAPAGG STPIYEPYDDGVLDIIEKPAES >Mature_261_residues TGPTEESAVATVADWPEGLAAVLRGAADQARAAVVEFSGPEAVGDYLGVSYEDGNAATHRFIAHLPGYQGWQWAVVVASY SGADHATISEVVLVPGPTALLAPDWVPWEQRVRPGDLSPGDLLAPAKDDPRLVPGYTASGDAQVDETAAEIGLGRRWVMS AWGRAQSAQRWHDGDYGPGSAMARSTKRVCRDCGFFLPLAGSLGAMFGVCGNELSADGHVVDRQYGCGAHSDTTAPAGGS TPIYEPYDDGVLDIIEKPAES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y877_MYCTU (P64733)
Other databases:
- EMBL: BX842574 - EMBL: AE000516 - PIR: B70780 - RefSeq: NP_215392.1 - RefSeq: NP_335328.1 - EnsemblBacteria: EBMYCT00000003745 - EnsemblBacteria: EBMYCT00000069805 - GeneID: 885601 - GeneID: 926210 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT0900 - KEGG: mtu:Rv0877 - TIGR: MT0900 - TubercuList: Rv0877 - GeneTree: EBGT00050000016776 - HOGENOM: HBG670459 - OMA: TNEYSAD - ProtClustDB: CLSK871869 - InterPro: IPR021391
Pfam domain/function: PF11228 DUF3027
EC number: NA
Molecular weight: Translated: 27470; Mature: 27338
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPTEESAVATVADWPEGLAAVLRGAADQARAAVVEFSGPEAVGDYLGVSYEDGNAATH CCCCCCCCCEEEHHHCHHHHHHHHHCCHHHHHEEEEECCCCHHHHHHHCCEECCCCHHHH RFIAHLPGYQGWQWAVVVASYSGADHATISEVVLVPGPTALLAPDWVPWEQRVRPGDLSP HHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCEECCCCCCHHHCCCCCCCCC GDLLAPAKDDPRLVPGYTASGDAQVDETAAEIGLGRRWVMSAWGRAQSAQRWHDGDYGPG CCEECCCCCCCEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCHHHHHHCCCCCCCCH SAMARSTKRVCRDCGFFLPLAGSLGAMFGVCGNELSADGHVVDRQYGCGAHSDTTAPAGG HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCC STPIYEPYDDGVLDIIEKPAES CCCCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure TGPTEESAVATVADWPEGLAAVLRGAADQARAAVVEFSGPEAVGDYLGVSYEDGNAATH CCCCCCCCEEEHHHCHHHHHHHHHCCHHHHHEEEEECCCCHHHHHHHCCEECCCCHHHH RFIAHLPGYQGWQWAVVVASYSGADHATISEVVLVPGPTALLAPDWVPWEQRVRPGDLSP HHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCEECCCCCCHHHCCCCCCCCC GDLLAPAKDDPRLVPGYTASGDAQVDETAAEIGLGRRWVMSAWGRAQSAQRWHDGDYGPG CCEECCCCCCCEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCHHHHHHCCCCCCCCH SAMARSTKRVCRDCGFFLPLAGSLGAMFGVCGNELSADGHVVDRQYGCGAHSDTTAPAGG HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCC STPIYEPYDDGVLDIIEKPAES CCCCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036