Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636765
Identifier: 121636765
GI number: 121636765
Start: 968618
End: 969910
Strand: Direct
Name: 121636765
Synonym: BCG_0894
Alternate gene names: NA
Gene position: 968618-969910 (Clockwise)
Preceding gene: 121636764
Following gene: 121636766
Centisome position: 22.14
GC content: 67.13
Gene sequence:
>1293_bases TTGCGTTACACCGGTCCGGAGCGCTGCTCGGGGGACGGACAAGTTCGAGCGGCCGGGGATCGCTATTCGACGGTGATCTG GCTGCTGGGCGGCAACTTGCTGGTGCGCTCGGCCGGATTCGGCTATCCGTTCCTGGCCTACCACGTGGCTGGACGAGGAC ATGGTGCGGGAGCGGTCGGCGCGGTCGTGGCGGCCTACGGCCTGGGTTGGGCGGTGGGGCAGCTGCTGTGTGGGTGGTTG GTGGACCGTGTCGGGGCGCGGGTGACGCTGGTATCCACCATGCTGGTGGCCGCCGCCGTGCTGGTGCTGATGGCCGGGCT ACACACCGTGCCGGGATTGCTGGTTGGGGCCATGATCGCCGGCCTGGTTTGCGATGCCCCGCGTCCGGTGTTGGGTGCGG TGATCGCGGAGTTGGTTGCCGACCCACAGCGGCGGGCACAACTCGACGGCTGGCGATACGGTTGGGTGCTCAATATCGGT GCTGCGATCACCGGCGGGGTCGGCGGTGTGGTCGCGGGCTGGTTGGACACCCCGGTGTTGTACTGGATCAATGGCATCGG GTGTGCGATCTTCGCGGGGTTGGCAGGCCGCTGTATACCTGCCGATGTGTGCCGTAGGACCGAGTCCGGCCTTCGAGCTT GCACCGCCATGTCGAAAGTTGGCTATCGGCAGGCACTCTCGGACAAGCGCCTGGTCCTGTTGGCCGTCTCGGGTCTGGCA ACGCTCACGACGCTGATGGGTTTCTTCGCGGCGGTACCGATGCTGATGAGCGCGAGTGGACTGGGTGTCGGGGCGTACGG CTGGGTGCAGTTGATCAACGCCCTAGCGGTTGTCGCGGTGACCCCGCTGTTGACGCCGTGGCTGAGCAAGCAGCTCGCAC TTGGTCCACGGCCAGACATTCTGGCCGGCGCGGGAGTGTGGGTGACTCTTTGTATGGCGGCTGCCGGGCTCGCCCGCACC ACGGTCGGTTTCAGTGTGGCCGCGGCTGCCTGCTCGCCGGGCGAGATTGCCTGGTTCGTGGTTGCCGCCGGCATCGTGCA CCGGATCGCCCCTCCCGCGCACGGTGGGCGCTACCACGGGATCTGGTCGATGGCCGTCGCGGCGTCGTCGGTGGCCGCGC CTATCCTGGCTGCTTTCAACCTGGCTAATGGTGGGCGCCTAGTGCTGGCGGCCACCACGGTGACGGTTGGTTTCTTCGGG GCCGCTTTGTGCTTGCCGCTGGCTCGTGTTCTGGCAGCTGCCAGTTGCGGTCCGTTGAGCAGCAAGGAGCCGTCGCGTGA CTCGTACCAGTGA
Upstream 100 bases:
>100_bases TTTCGTCATCGTTTCAGGCCGATCGGAGGACGCCGGCACAGGTCAACGATCCTAACTTGAGTTAGTGACCACAGCGGCGG CCATCGCCCGCGAGGACCGG
Downstream 100 bases:
>100_bases AGGGTTGGCTGCGTTCGTGGTCGATCAGCTGGAGGAGCTGTATCGCCGGATGTGGGTGTTGCGACTGCTCGATATGGCGT TGGAGCAGTTGCGCATCGAA
Product: putative integral membrane protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Integral Membrane Protein; Conserved Membrane Protein
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MRYTGPERCSGDGQVRAAGDRYSTVIWLLGGNLLVRSAGFGYPFLAYHVAGRGHGAGAVGAVVAAYGLGWAVGQLLCGWL VDRVGARVTLVSTMLVAAAVLVLMAGLHTVPGLLVGAMIAGLVCDAPRPVLGAVIAELVADPQRRAQLDGWRYGWVLNIG AAITGGVGGVVAGWLDTPVLYWINGIGCAIFAGLAGRCIPADVCRRTESGLRACTAMSKVGYRQALSDKRLVLLAVSGLA TLTTLMGFFAAVPMLMSASGLGVGAYGWVQLINALAVVAVTPLLTPWLSKQLALGPRPDILAGAGVWVTLCMAAAGLART TVGFSVAAAACSPGEIAWFVVAAGIVHRIAPPAHGGRYHGIWSMAVAASSVAAPILAAFNLANGGRLVLAATTVTVGFFG AALCLPLARVLAAASCGPLSSKEPSRDSYQ
Sequences:
>Translated_430_residues MRYTGPERCSGDGQVRAAGDRYSTVIWLLGGNLLVRSAGFGYPFLAYHVAGRGHGAGAVGAVVAAYGLGWAVGQLLCGWL VDRVGARVTLVSTMLVAAAVLVLMAGLHTVPGLLVGAMIAGLVCDAPRPVLGAVIAELVADPQRRAQLDGWRYGWVLNIG AAITGGVGGVVAGWLDTPVLYWINGIGCAIFAGLAGRCIPADVCRRTESGLRACTAMSKVGYRQALSDKRLVLLAVSGLA TLTTLMGFFAAVPMLMSASGLGVGAYGWVQLINALAVVAVTPLLTPWLSKQLALGPRPDILAGAGVWVTLCMAAAGLART TVGFSVAAAACSPGEIAWFVVAAGIVHRIAPPAHGGRYHGIWSMAVAASSVAAPILAAFNLANGGRLVLAATTVTVGFFG AALCLPLARVLAAASCGPLSSKEPSRDSYQ >Mature_430_residues MRYTGPERCSGDGQVRAAGDRYSTVIWLLGGNLLVRSAGFGYPFLAYHVAGRGHGAGAVGAVVAAYGLGWAVGQLLCGWL VDRVGARVTLVSTMLVAAAVLVLMAGLHTVPGLLVGAMIAGLVCDAPRPVLGAVIAELVADPQRRAQLDGWRYGWVLNIG AAITGGVGGVVAGWLDTPVLYWINGIGCAIFAGLAGRCIPADVCRRTESGLRACTAMSKVGYRQALSDKRLVLLAVSGLA TLTTLMGFFAAVPMLMSASGLGVGAYGWVQLINALAVVAVTPLLTPWLSKQLALGPRPDILAGAGVWVTLCMAAAGLART TVGFSVAAAACSPGEIAWFVVAAGIVHRIAPPAHGGRYHGIWSMAVAASSVAAPILAAFNLANGGRLVLAATTVTVGFFG AALCLPLARVLAAASCGPLSSKEPSRDSYQ
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43855; Mature: 43855
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYTGPERCSGDGQVRAAGDRYSTVIWLLGGNLLVRSAGFGYPFLAYHVAGRGHGAGAVG CCCCCCCCCCCCCCEEECCCCCEEEEEEECCCEEEEECCCCCHHHHHEECCCCCCCHHHH AVVAAYGLGWAVGQLLCGWLVDRVGARVTLVSTMLVAAAVLVLMAGLHTVPGLLVGAMIA HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLVCDAPRPVLGAVIAELVADPQRRAQLDGWRYGWVLNIGAAITGGVGGVVAGWLDTPVL HHHCCCCCHHHHHHHHHHHCCCHHHHHCCCCEEEEEEEECHHHHCCHHHHHHHHHCCCHH YWINGIGCAIFAGLAGRCIPADVCRRTESGLRACTAMSKVGYRQALSDKRLVLLAVSGLA HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHH TLTTLMGFFAAVPMLMSASGLGVGAYGWVQLINALAVVAVTPLLTPWLSKQLALGPRPDI HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LAGAGVWVTLCMAAAGLARTTVGFSVAAAACSPGEIAWFVVAAGIVHRIAPPAHGGRYHG EECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCH IWSMAVAASSVAAPILAAFNLANGGRLVLAATTVTVGFFGAALCLPLARVLAAASCGPLS HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SKEPSRDSYQ CCCCCCCCCC >Mature Secondary Structure MRYTGPERCSGDGQVRAAGDRYSTVIWLLGGNLLVRSAGFGYPFLAYHVAGRGHGAGAVG CCCCCCCCCCCCCCEEECCCCCEEEEEEECCCEEEEECCCCCHHHHHEECCCCCCCHHHH AVVAAYGLGWAVGQLLCGWLVDRVGARVTLVSTMLVAAAVLVLMAGLHTVPGLLVGAMIA HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLVCDAPRPVLGAVIAELVADPQRRAQLDGWRYGWVLNIGAAITGGVGGVVAGWLDTPVL HHHCCCCCHHHHHHHHHHHCCCHHHHHCCCCEEEEEEEECHHHHCCHHHHHHHHHCCCHH YWINGIGCAIFAGLAGRCIPADVCRRTESGLRACTAMSKVGYRQALSDKRLVLLAVSGLA HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHH TLTTLMGFFAAVPMLMSASGLGVGAYGWVQLINALAVVAVTPLLTPWLSKQLALGPRPDI HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LAGAGVWVTLCMAAAGLARTTVGFSVAAAACSPGEIAWFVVAAGIVHRIAPPAHGGRYHG EECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCH IWSMAVAASSVAAPILAAFNLANGGRLVLAATTVTVGFFGAALCLPLARVLAAASCGPLS HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SKEPSRDSYQ CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA