Click here to switch to the map view.

The map label for this gene is pepC

Identifier: 121636724

GI number: 121636724

Start: 923740

End: 925041

Strand: Direct

Name: pepC

Synonym: BCG_0852

Alternate gene names: 121636724

Gene position: 923740-925041 (Clockwise)

Preceding gene: 121636721

Following gene: 121636725

Centisome position: 21.12

GC content: 69.12

Gene sequence:

>1302_bases
ATGGCGGCCACGGCACACGGCCTGTGCGAATTCATCGACGCGTCCCCGTCGCCGTTTCACGTCTGCGCGACGGTGGCGGG
ACGGCTGCTCGGCGCCGGATACCGCGAGCTGCGCGAAGCGGATCGCTGGCCGGACAAACCGGGCCGGTACTTCACCGTCC
GGGCTGGCTCGCTGGTGGCGTGGAACGCCGAGCAGAGCGGGCACACGCAGGTCCCATTCCGGATCGTCGGCGCGCACACC
GACAGCCCCAATCTGCGGGTCAAGCAGCATCCGGACAGGCTCGTCGCCGGCTGGCACGTGGTGGCGCTGCAACCGTATGG
GGGAGTTTGGCTGCACTCCTGGCTGGATCGCGATCTGGGCATCAGCGGGCGGCTATCGGTGCGTGACGGTACCGGGGTCA
GCCACCGGCTGGTCCGGATCGACGACCCGATCCTGCGGGTGCCGCAGCTGGCGATTCACCTGGCCGAGGACCGCAAGTCG
CTCACGCTCGATCCGCAACGACACATCAACGCTGTATGGGGCGTGGGAGAGCGGGTGGAGTCCTTTGTGGGGTACGTCGC
TCAGCGCGCCGGGGTGGCGGCGGCCGACGTGCTGGCCGCGGACCTGATGACCCATGACTTGACCCCGTCGGCGCTGATCG
GCGCTTCGGTCAACGGCACTGCCAGCCTGCTCAGCGCGCCGCGGCTGGACAACCAGGCCAGTTGCTATGCCGGGATGGAG
GCACTGCTGGCCGTGGACGTGGACTCGGCGTCGAGCGGATTCGTGCCCGTGCTGGCGATTTTCGACCACGAGGAGGTGGG
ATCGGCCTCGGGCCACGGCGCACAGTCCGATCTGCTATCCAGCGTGCTCGAACGCATCGTGCTCGCGGCGGGCGGCACCC
GGGAGGACTTCCTGCGCCGACTGACCACCTCGATGCTCGCCTCGGCCGACATGGCGCATGCGACGCACCCCAACTACCCG
GACCGTCACGAGCCGAGCCACCCGATCGAAGTCAACGCGGGTCCGGTGCTCAAGGTGCACCCAAATCTGCGCTACGCCAC
CGACGGACGCACCGCGGCGGCGTTCGCACTGGCCTGCCAGCGCGCGGGAGTGCCTATGCAGCGTTACGAACATCGCGCCG
ATCTGCCGTGCGGGTCGACGATCGGGCCGTTGGCCGCGGCGCGCACCGGAATCCCCACGGTCGACGTCGGCGCCGCCCAG
CTGGCGATGCACTCCGCGCGAGAGTTGATGGGCGCTCACGACGTAGCCGCCTATTCGGCGGCACTGCAAGCGTTTCTTTC
CGCCGAGCTATCCGAGGCATAG

Upstream 100 bases:

>100_bases
GCGGCCGGAGTCAACGGCGCCAGAATCGGCTGCGGAGAGACAGCAGGCACAGCCACGACCCTAACGTCCCTGCAATACCG
GTGATGCTAGACATGGCTAC

Downstream 100 bases:

>100_bases
GGTCGGGCGGTATGGCACTCAAGGTAGAGATGGTCACTTTCGACTGCAGCGACCCTGCGAAGCTTGCCGGCTGGTGGGCC
GAGCAGTTCGATGGCACGAC

Product: putative aminopeptidase 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MAATAHGLCEFIDASPSPFHVCATVAGRLLGAGYRELREADRWPDKPGRYFTVRAGSLVAWNAEQSGHTQVPFRIVGAHT
DSPNLRVKQHPDRLVAGWHVVALQPYGGVWLHSWLDRDLGISGRLSVRDGTGVSHRLVRIDDPILRVPQLAIHLAEDRKS
LTLDPQRHINAVWGVGERVESFVGYVAQRAGVAAADVLAADLMTHDLTPSALIGASVNGTASLLSAPRLDNQASCYAGME
ALLAVDVDSASSGFVPVLAIFDHEEVGSASGHGAQSDLLSSVLERIVLAAGGTREDFLRRLTTSMLASADMAHATHPNYP
DRHEPSHPIEVNAGPVLKVHPNLRYATDGRTAAAFALACQRAGVPMQRYEHRADLPCGSTIGPLAAARTGIPTVDVGAAQ
LAMHSARELMGAHDVAAYSAALQAFLSAELSEA

Sequences:

>Translated_433_residues
MAATAHGLCEFIDASPSPFHVCATVAGRLLGAGYRELREADRWPDKPGRYFTVRAGSLVAWNAEQSGHTQVPFRIVGAHT
DSPNLRVKQHPDRLVAGWHVVALQPYGGVWLHSWLDRDLGISGRLSVRDGTGVSHRLVRIDDPILRVPQLAIHLAEDRKS
LTLDPQRHINAVWGVGERVESFVGYVAQRAGVAAADVLAADLMTHDLTPSALIGASVNGTASLLSAPRLDNQASCYAGME
ALLAVDVDSASSGFVPVLAIFDHEEVGSASGHGAQSDLLSSVLERIVLAAGGTREDFLRRLTTSMLASADMAHATHPNYP
DRHEPSHPIEVNAGPVLKVHPNLRYATDGRTAAAFALACQRAGVPMQRYEHRADLPCGSTIGPLAAARTGIPTVDVGAAQ
LAMHSARELMGAHDVAAYSAALQAFLSAELSEA
>Mature_432_residues
AATAHGLCEFIDASPSPFHVCATVAGRLLGAGYRELREADRWPDKPGRYFTVRAGSLVAWNAEQSGHTQVPFRIVGAHTD
SPNLRVKQHPDRLVAGWHVVALQPYGGVWLHSWLDRDLGISGRLSVRDGTGVSHRLVRIDDPILRVPQLAIHLAEDRKSL
TLDPQRHINAVWGVGERVESFVGYVAQRAGVAAADVLAADLMTHDLTPSALIGASVNGTASLLSAPRLDNQASCYAGMEA
LLAVDVDSASSGFVPVLAIFDHEEVGSASGHGAQSDLLSSVLERIVLAAGGTREDFLRRLTTSMLASADMAHATHPNYPD
RHEPSHPIEVNAGPVLKVHPNLRYATDGRTAAAFALACQRAGVPMQRYEHRADLPCGSTIGPLAAARTGIPTVDVGAAQL
AMHSARELMGAHDVAAYSAALQAFLSAELSEA

Specific function: Unknown

COG id: COG1362

COG function: function code E; Aspartyl aminopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M18 family

Homologues:

Organism=Homo sapiens, GI156416028, Length=456, Percent_Identity=35.7456140350877, Blast_Score=259, Evalue=2e-69,
Organism=Caenorhabditis elegans, GI17552916, Length=437, Percent_Identity=36.8421052631579, Blast_Score=240, Evalue=9e-64,
Organism=Saccharomyces cerevisiae, GI6321905, Length=461, Percent_Identity=32.7548806941432, Blast_Score=248, Evalue=2e-66,
Organism=Saccharomyces cerevisiae, GI6322746, Length=454, Percent_Identity=29.7356828193833, Blast_Score=187, Evalue=2e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): APEB_MYCBO (P59951)

Other databases:

- EMBL:   BX248336
- RefSeq:   NP_854481.1
- ProteinModelPortal:   P59951
- SMR:   P59951
- MEROPS:   M18.002
- EnsemblBacteria:   EBMYCT00000015508
- GeneID:   1092551
- GenomeReviews:   BX248333_GR
- KEGG:   mbo:Mb0823
- GeneTree:   EBGT00050000017638
- HOGENOM:   HBG630643
- OMA:   SPSPFHA
- ProtClustDB:   PRK02813
- BioCyc:   MBOV233413:MB0823-MONOMER
- GO:   GO:0005773
- GO:   GO:0006508
- HAMAP:   MF_00467
- InterPro:   IPR022984
- InterPro:   IPR001948
- PRINTS:   PR00932

Pfam domain/function: PF02127 Peptidase_M18

EC number: NA

Molecular weight: Translated: 46056; Mature: 45925

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAATAHGLCEFIDASPSPFHVCATVAGRLLGAGYRELREADRWPDKPGRYFTVRAGSLVA
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEECCCEEE
WNAEQSGHTQVPFRIVGAHTDSPNLRVKQHPDRLVAGWHVVALQPYGGVWLHSWLDRDLG
ECCCCCCCCCCCEEEEEECCCCCCCEEECCCCCEEECEEEEEECCCCCHHHHHHHHHCCC
ISGRLSVRDGTGVSHRLVRIDDPILRVPQLAIHLAEDRKSLTLDPQRHINAVWGVGERVE
CCCEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHH
SFVGYVAQRAGVAAADVLAADLMTHDLTPSALIGASVNGTASLLSAPRLDNQASCYAGME
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHH
ALLAVDVDSASSGFVPVLAIFDHEEVGSASGHGAQSDLLSSVLERIVLAAGGTREDFLRR
EEEEEECCCCCCCCEEEEEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
LTTSMLASADMAHATHPNYPDRHEPSHPIEVNAGPVLKVHPNLRYATDGRTAAAFALACQ
HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEEECCCCEEECCCCHHHHHHHHHH
RAGVPMQRYEHRADLPCGSTIGPLAAARTGIPTVDVGAAQLAMHSARELMGAHDVAAYSA
HCCCCHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ALQAFLSAELSEA
HHHHHHHHHHCCC
>Mature Secondary Structure 
AATAHGLCEFIDASPSPFHVCATVAGRLLGAGYRELREADRWPDKPGRYFTVRAGSLVA
CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEECCCEEE
WNAEQSGHTQVPFRIVGAHTDSPNLRVKQHPDRLVAGWHVVALQPYGGVWLHSWLDRDLG
ECCCCCCCCCCCEEEEEECCCCCCCEEECCCCCEEECEEEEEECCCCCHHHHHHHHHCCC
ISGRLSVRDGTGVSHRLVRIDDPILRVPQLAIHLAEDRKSLTLDPQRHINAVWGVGERVE
CCCEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHH
SFVGYVAQRAGVAAADVLAADLMTHDLTPSALIGASVNGTASLLSAPRLDNQASCYAGME
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHH
ALLAVDVDSASSGFVPVLAIFDHEEVGSASGHGAQSDLLSSVLERIVLAAGGTREDFLRR
EEEEEECCCCCCCCEEEEEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
LTTSMLASADMAHATHPNYPDRHEPSHPIEVNAGPVLKVHPNLRYATDGRTAAAFALACQ
HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEEECCCCEEECCCCHHHHHHHHHH
RAGVPMQRYEHRADLPCGSTIGPLAAARTGIPTVDVGAAQLAMHSARELMGAHDVAAYSA
HCCCCHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ALQAFLSAELSEA
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972