Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636574
Identifier: 121636574
GI number: 121636574
Start: 780643
End: 781338
Strand: Reverse
Name: 121636574
Synonym: BCG_0702c
Alternate gene names: NA
Gene position: 781338-780643 (Counterclockwise)
Preceding gene: 121636577
Following gene: 121636568
Centisome position: 17.86
GC content: 67.1
Gene sequence:
>696_bases ATGACCTCGCAGACCGGTGTTCGCGACGAGCTGCTGCACGCCGGCGTGCGACTGCTCGACGATCACGGGCCCGACGCGCT GCAGACCCGCAAGGTGGCCGCCGCAGCAGGCACCTCGACGATGGCGGTGTACACCCATTTCGGCGGGATGCGCGGACTGA TCGCCGCCATAGCCGAAGAAGGGCTACGCCAGTTCGATGTCGCGCTGACGGTCCCGCAGACCGCCGATCCGGTCGCCGAC CTGCTGGCCATCGGCACCGCCTACCGGCGCTACGCCATCGAGCGCCCGCACATGTACCGGCTAATGTTCGGCAGCACCAG CGCACACGGCATCAACGTGCCAGCGCGCGACGTGTTGACCCTCAAGGTTGCCGAGATCGAACACCAGCACCCCAGTTTCG CGCATGTGGTGCGAGCGGTGCACCGGTGCCTGCTGGCCGGCCGGTTCGCGACCGCGCTTGGAGCCGACGACGACACGGCA ATAGTTGCCACCGCGGCGCAGTTTTGGTCACAGATCCACGGCTTCGTGATGCTCGAGCTGGCCGGCTTCTACGGCGATCG AGGCGCGGCCGTCGAACCGGTGCTCGCCGCGATGACGGTGAACCTGCTTGTCGCGCTGGGAGATTCACCCGAGCGGGCGC AGTGTTCGCTACGGGCCGAGCAGACGCAAAAGAACACGCTGGGCAGAGCTACTTGA
Upstream 100 bases:
>100_bases TTGGGATTCGGCGGCTTGTGCGGTGGTCATGCCGATCTCCTATAACATTGTTATTTCACTGATATTGGAACGGTACGCCC TTGGTGAGAACATGGCAAGG
Downstream 100 bases:
>100_bases CGGTGACGGTGGCGCCGGCGGCCTCCAGCTTGGCCTTGGCCTCGTCGGCGGCCTCCTTGGCGACCTTCTCCAGCAGCGGC TTGGGCGCGCCGTCGACCAG
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Repressor; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulatory Protein
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MTSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGLRQFDVALTVPQTADPVAD LLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTLKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTA IVATAAQFWSQIHGFVMLELAGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT
Sequences:
>Translated_231_residues MTSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGLRQFDVALTVPQTADPVAD LLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTLKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTA IVATAAQFWSQIHGFVMLELAGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT >Mature_230_residues TSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGLRQFDVALTVPQTADPVADL LAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTLKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAI VATAAQFWSQIHGFVMLELAGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24728; Mature: 24596
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEE CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEHHHHHCCHHHHHHHHHHH GLRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLT HHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHEEE LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLEL EEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH AGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT HHHCCCCCCHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEE CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEHHHHHCCHHHHHHHHHHH GLRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLT HHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHEEE LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLEL EEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH AGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT HHHCCCCCCHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA