Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is lpqN
Identifier: 121636501
GI number: 121636501
Start: 709271
End: 709957
Strand: Reverse
Name: lpqN
Synonym: BCG_0628c
Alternate gene names: NA
Gene position: 709957-709271 (Counterclockwise)
Preceding gene: 121636503
Following gene: 121636498
Centisome position: 16.23
GC content: 63.9
Gene sequence:
>687_bases ATGAAGCACTTCACGGCGGCCGTCGCGACGGTGGCGCTGAGCCTGGCACTGGCTGGCTGCAGTTTCAACATCAAGACCGA CAGCGCGCCAACCACGTCGCCAACCACGACGTCCCCGACGACGTCGACAACGACTACGTCGGCAACCACCTCGGCTCAGG CAGCGGGGCCCAACTACACCATCGCCGACTATATCCGGGACAACCACATCCAGGAGACCCCAGTGCACCACGGCGACCCC GGCTCCCCGACCATCGACCTGCCGGTGCCCGACGATTGGCGGCTGCTTCCGGAAAGCTCCCGCGCACCCTATGGCGGCAT CGTCTACACCCAGCCCGCCGATCCCAACGATCCCCCCACCATCGTTGCGATCCTCTCCAAACTCACCGGTGACATCGACC CCGCGAAGGTCCTCCAATTCGCACCCGGCGAGTTGAAAAACCTGCCCGGCTTCCAAGGCAGCGGCGACGGAAGTGCAGCC ACGCTCGGCGGCTTTTCAGCATGGCAGCTCGGTGGTTCATACAGCAAGAACGGCAAGTTGCGGACCGTCGCGCAGAAGAC GGTGGTGATTCCCAGCCAAGGTGCGGTGTTCGTGCTTCAACTCAACGCCGACGCGCTCGACGACGAGACGATGACGTTGA TGGACGCCGCCAACGTCATCGACGAGCAGACGACCATCACGCCCTAA
Upstream 100 bases:
>100_bases AGATGGGATTGCAGTGATAGGGTCGCGCGCACACCAGTTGGACTAGTCTCAATCCGACCTCACCGGCCGGAAGTGCCGGT CCAATCTTCGGGAGCGCGCA
Downstream 100 bases:
>100_bases GGGACGGATCGCACGCGGAAGACGAACACGCCGCGGTGCAGCACCGAATCGGTTGCGGTTTACGGAATGACGGTGAAGCG CCCACCGCCGATCGGCCGCA
Product: putative lipoprotein lpqN
Products: NA
Alternate protein names: MK35 Lipoprotein; Protein Kinase; Serine/Threonine-Protein Kinase PknE
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MKHFTAAVATVALSLALAGCSFNIKTDSAPTTSPTTTSPTTSTTTTSATTSAQAAGPNYTIADYIRDNHIQETPVHHGDP GSPTIDLPVPDDWRLLPESSRAPYGGIVYTQPADPNDPPTIVAILSKLTGDIDPAKVLQFAPGELKNLPGFQGSGDGSAA TLGGFSAWQLGGSYSKNGKLRTVAQKTVVIPSQGAVFVLQLNADALDDETMTLMDAANVIDEQTTITP
Sequences:
>Translated_228_residues MKHFTAAVATVALSLALAGCSFNIKTDSAPTTSPTTTSPTTSTTTTSATTSAQAAGPNYTIADYIRDNHIQETPVHHGDP GSPTIDLPVPDDWRLLPESSRAPYGGIVYTQPADPNDPPTIVAILSKLTGDIDPAKVLQFAPGELKNLPGFQGSGDGSAA TLGGFSAWQLGGSYSKNGKLRTVAQKTVVIPSQGAVFVLQLNADALDDETMTLMDAANVIDEQTTITP >Mature_228_residues MKHFTAAVATVALSLALAGCSFNIKTDSAPTTSPTTTSPTTSTTTTSATTSAQAAGPNYTIADYIRDNHIQETPVHHGDP GSPTIDLPVPDDWRLLPESSRAPYGGIVYTQPADPNDPPTIVAILSKLTGDIDPAKVLQFAPGELKNLPGFQGSGDGSAA TLGGFSAWQLGGSYSKNGKLRTVAQKTVVIPSQGAVFVLQLNADALDDETMTLMDAANVIDEQTTITP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23683; Mature: 23683
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHFTAAVATVALSLALAGCSFNIKTDSAPTTSPTTTSPTTSTTTTSATTSAQAAGPNYT CCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCE IADYIRDNHIQETPVHHGDPGSPTIDLPVPDDWRLLPESSRAPYGGIVYTQPADPNDPPT EHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCEECCCCCCCCCCCEEEECCCCCCCCHH IVAILSKLTGDIDPAKVLQFAPGELKNLPGFQGSGDGSAATLGGFSAWQLGGSYSKNGKL HHHHHHHHHCCCCHHHHHCCCCCHHHCCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCE RTVAQKTVVIPSQGAVFVLQLNADALDDETMTLMDAANVIDEQTTITP EEEEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKHFTAAVATVALSLALAGCSFNIKTDSAPTTSPTTTSPTTSTTTTSATTSAQAAGPNYT CCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCE IADYIRDNHIQETPVHHGDPGSPTIDLPVPDDWRLLPESSRAPYGGIVYTQPADPNDPPT EHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCEECCCCCCCCCCCEEEECCCCCCCCHH IVAILSKLTGDIDPAKVLQFAPGELKNLPGFQGSGDGSAATLGGFSAWQLGGSYSKNGKL HHHHHHHHHCCCCHHHHHCCCCCHHHCCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCE RTVAQKTVVIPSQGAVFVLQLNADALDDETMTLMDAANVIDEQTTITP EEEEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA