Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636498
Identifier: 121636498
GI number: 121636498
Start: 708007
End: 708498
Strand: Reverse
Name: 121636498
Synonym: BCG_0625c
Alternate gene names: NA
Gene position: 708498-708007 (Counterclockwise)
Preceding gene: 121636501
Following gene: 121636496
Centisome position: 16.2
GC content: 64.43
Gene sequence:
>492_bases ATGACAGATCAGTCGTATGCGGTAGACATCGCACACCCACCGGCGGCCCTCCTTCGCCTCGTCAACCCGATCCTGCGCTC CCTGCTGCACACCCCGCTTGCCGGCCCGCTACGCACACAGCTGATGGTGGTGAGCTTCACCGGGCGAAAGACTGGGCGGC ACTTCTCGATTCCCTTGAGCGCGCACGTCATCGACAACGACCTCTACGCGCTGACCGAGGCCGGATGGAAGCACAACTTC TCCGACGGTGCCGCCGCCCAGGTCGTCTACGACGGCAAGACGACCGCTATGCGTGGCGAGCTCATCCGGGACCGTGCGGT CGTTTCTGAACTTTTCCTGCGCGCCGCACAGGCCTATGGCGTCAAGCGTGGCCAACGCATGCTGGGGTTGAGCTTCCGCG ACCGGCGCATACCCACGCTCGAGGAGTTCGCCGAGGCGGTGGACCGGCTCAAGCTGGTAGCCATTCGGTTGACTCCGGCC GACAATTCGTAG
Upstream 100 bases:
>100_bases TGTCCACATACGTATGGTACTACCGGTGGCGCCATATATCTTGTTGCGTCACCAACTTGTCGGCGTAGCCGCGAACCCCG ATCGGATCTACGGTGAAGGC
Downstream 100 bases:
>100_bases CTCCGCGCCGAGCGTGCGCCGGCCGCGCCGAACGTGCATTGGTGGCGGGGACACGCCGCTCGATGCCGCCGTGGTTGCAC CTTCGGCGTGTCAGCTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MTDQSYAVDIAHPPAALLRLVNPILRSLLHTPLAGPLRTQLMVVSFTGRKTGRHFSIPLSAHVIDNDLYALTEAGWKHNF SDGAAAQVVYDGKTTAMRGELIRDRAVVSELFLRAAQAYGVKRGQRMLGLSFRDRRIPTLEEFAEAVDRLKLVAIRLTPA DNS
Sequences:
>Translated_163_residues MTDQSYAVDIAHPPAALLRLVNPILRSLLHTPLAGPLRTQLMVVSFTGRKTGRHFSIPLSAHVIDNDLYALTEAGWKHNF SDGAAAQVVYDGKTTAMRGELIRDRAVVSELFLRAAQAYGVKRGQRMLGLSFRDRRIPTLEEFAEAVDRLKLVAIRLTPA DNS >Mature_162_residues TDQSYAVDIAHPPAALLRLVNPILRSLLHTPLAGPLRTQLMVVSFTGRKTGRHFSIPLSAHVIDNDLYALTEAGWKHNFS DGAAAQVVYDGKTTAMRGELIRDRAVVSELFLRAAQAYGVKRGQRMLGLSFRDRRIPTLEEFAEAVDRLKLVAIRLTPAD NS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18035; Mature: 17904
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQSYAVDIAHPPAALLRLVNPILRSLLHTPLAGPLRTQLMVVSFTGRKTGRHFSIPLS CCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEECCCCCCCEEECCEE AHVIDNDLYALTEAGWKHNFSDGAAAQVVYDGKTTAMRGELIRDRAVVSELFLRAAQAYG EEEECCCHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VKRGQRMLGLSFRDRRIPTLEEFAEAVDRLKLVAIRLTPADNS HHCCCHHCCCCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCC >Mature Secondary Structure TDQSYAVDIAHPPAALLRLVNPILRSLLHTPLAGPLRTQLMVVSFTGRKTGRHFSIPLS CCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEECCCCCCCEEECCEE AHVIDNDLYALTEAGWKHNFSDGAAAQVVYDGKTTAMRGELIRDRAVVSELFLRAAQAYG EEEECCCHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VKRGQRMLGLSFRDRRIPTLEEFAEAVDRLKLVAIRLTPADNS HHCCCHHCCCCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA