Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636492
Identifier: 121636492
GI number: 121636492
Start: 698142
End: 699284
Strand: Reverse
Name: 121636492
Synonym: BCG_0619c
Alternate gene names: NA
Gene position: 699284-698142 (Counterclockwise)
Preceding gene: 121636493
Following gene: 121636491
Centisome position: 15.99
GC content: 65.0
Gene sequence:
>1143_bases GTGGCTGGCAAGCCTGATGTGGTGACGGTGCTGCTGGGCGGTGACGTCATGCTCGGCCGTGGCGTCGATCAGATCCTGCC TCATCCCGGCAAACCGCAATTGCGCGAACGGTATATGCGGGATGCGACCGGCTATGTTCGCCTGGCCGAGCGGGTGAACG GGCGCATTCCGCTCCCCGTGGATTGGCGCTGGCCCTGGGGCGAGGCGTTGGCGGTCCTTGAGAACACCGCGACCGACGTC TGTTTGATCAATCTGGAGACGACGATCACCGCCGACGGTGAATTCGCCGACCGCAAACCGGTCTGCTACCGGATGCACCC GGATAACGTGCCGGCGCTGACGGCATTGCGGCCGCACGTGTGCGCGCTGGCCAACAACCACATTCTCGATTTCGGCTACC AGGGGCTGACCGATACGGTCGCGGCTCTCGCCGGTGCGGGGATCCAGAGTGTCGGGGCGGGAGCCGATTTGCTCGCCGCT CGCCGCTCGGCGCTAGTCACGGTTGGCCATGAACGCCGGGTGATCGTCGGCTCGGTAGCGGCGGAATCCAGCGGCGTCCC CGAATCCTGGGCCGCCCGCCGCGACCGGCCCGGAGTGTGGTTGATCCGGGATCCGGCGCAACGCGACGTCGCCGACGATG TGGCGGCACAGGTGCTGGCGGACAAACGCCCCGGCGATATCGCCATAGTCTCGATGCATTGGGGATCCAATTGGGGCTAT GCGACCGCACCCGGCGACGTCGCGTTCGCGCACCGACTGATCGACGCCGGCATCGACATGGTCCACGGACATTCCTCGCA CCATCCGCGGCCAATCGAGATATATCGCGGTAAACCGATCCTGTACGGATGCGGTGACGTCGTTGACGACTACGAAGGCA TCGGCGGGCACGAGTCGTTCCGCAGTGAACTGCGACTGCTGTATCTGACCGTCACCGATCCCGCCAGCGGGAACCTGATC TCGCTGCAGATGCTTCCACTGCGAGTGTCGCGGATGCGCCTACAGCGTGCCTCCCAGACCGACACCGAATGGCTCCGCAA CACCATTGAGCGCATCAGCCGCCGGTTCGGGATTCGAGTCGTGACTCGACCCGACAACCTGCTGGAGGTCGTTCCCGCTG CCAACCTAACGAGCAAGGAGTAA
Upstream 100 bases:
>100_bases GGCCCCACCCACGAGGCCGCCGCCGGCCGATCGTATGACGTGCAATGTACGCCATAGGGTGCGTGTTACGGCGATTACCT GAAGGCGGCGGTGGTCCGGA
Downstream 100 bases:
>100_bases CCGGCAACCATGGCGATCCGCCAACACGTCGGCGCGCTGTTCACCGACCTGTACGAGGTGACGATGGCCCAGGCCTACTG GGCCGAAAGAATGTCGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MAGKPDVVTVLLGGDVMLGRGVDQILPHPGKPQLRERYMRDATGYVRLAERVNGRIPLPVDWRWPWGEALAVLENTATDV CLINLETTITADGEFADRKPVCYRMHPDNVPALTALRPHVCALANNHILDFGYQGLTDTVAALAGAGIQSVGAGADLLAA RRSALVTVGHERRVIVGSVAAESSGVPESWAARRDRPGVWLIRDPAQRDVADDVAAQVLADKRPGDIAIVSMHWGSNWGY ATAPGDVAFAHRLIDAGIDMVHGHSSHHPRPIEIYRGKPILYGCGDVVDDYEGIGGHESFRSELRLLYLTVTDPASGNLI SLQMLPLRVSRMRLQRASQTDTEWLRNTIERISRRFGIRVVTRPDNLLEVVPAANLTSKE
Sequences:
>Translated_380_residues MAGKPDVVTVLLGGDVMLGRGVDQILPHPGKPQLRERYMRDATGYVRLAERVNGRIPLPVDWRWPWGEALAVLENTATDV CLINLETTITADGEFADRKPVCYRMHPDNVPALTALRPHVCALANNHILDFGYQGLTDTVAALAGAGIQSVGAGADLLAA RRSALVTVGHERRVIVGSVAAESSGVPESWAARRDRPGVWLIRDPAQRDVADDVAAQVLADKRPGDIAIVSMHWGSNWGY ATAPGDVAFAHRLIDAGIDMVHGHSSHHPRPIEIYRGKPILYGCGDVVDDYEGIGGHESFRSELRLLYLTVTDPASGNLI SLQMLPLRVSRMRLQRASQTDTEWLRNTIERISRRFGIRVVTRPDNLLEVVPAANLTSKE >Mature_379_residues AGKPDVVTVLLGGDVMLGRGVDQILPHPGKPQLRERYMRDATGYVRLAERVNGRIPLPVDWRWPWGEALAVLENTATDVC LINLETTITADGEFADRKPVCYRMHPDNVPALTALRPHVCALANNHILDFGYQGLTDTVAALAGAGIQSVGAGADLLAAR RSALVTVGHERRVIVGSVAAESSGVPESWAARRDRPGVWLIRDPAQRDVADDVAAQVLADKRPGDIAIVSMHWGSNWGYA TAPGDVAFAHRLIDAGIDMVHGHSSHHPRPIEIYRGKPILYGCGDVVDDYEGIGGHESFRSELRLLYLTVTDPASGNLIS LQMLPLRVSRMRLQRASQTDTEWLRNTIERISRRFGIRVVTRPDNLLEVVPAANLTSKE
Specific function: Could be involved in the biosynthesis of a cell wall component (Potential) [H]
COG id: COG2843
COG function: function code M; Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CapA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019079 [H]
Pfam domain/function: PF09587 PGA_cap [H]
EC number: NA
Molecular weight: Translated: 41562; Mature: 41431
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGKPDVVTVLLGGDVMLGRGVDQILPHPGKPQLRERYMRDATGYVRLAERVNGRIPLPV CCCCCCEEEEEECCCEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DWRWPWGEALAVLENTATDVCLINLETTITADGEFADRKPVCYRMHPDNVPALTALRPHV CCCCCHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCEEEEECCCCCCEEHHCCCHH CALANNHILDFGYQGLTDTVAALAGAGIQSVGAGADLLAARRSALVTVGHERRVIVGSVA HHHCCCCEEECCCCCHHHHHHHHHCCCHHHCCCCHHHHHHCCCEEEEECCCCEEEEEEEE AESSGVPESWAARRDRPGVWLIRDPAQRDVADDVAAQVLADKRPGDIAIVSMHWGSNWGY CCCCCCCHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCE ATAPGDVAFAHRLIDAGIDMVHGHSSHHPRPIEIYRGKPILYGCGDVVDDYEGIGGHESF ECCCCHHHHHHHHHHHCCCEECCCCCCCCCCEEEECCCEEEEECCCHHHHHCCCCCHHHH RSELRLLYLTVTDPASGNLISLQMLPLRVSRMRLQRASQTDTEWLRNTIERISRRFGIRV HCCEEEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCEEE VTRPDNLLEVVPAANLTSKE EECCCCCEEECCCCCCCCCC >Mature Secondary Structure AGKPDVVTVLLGGDVMLGRGVDQILPHPGKPQLRERYMRDATGYVRLAERVNGRIPLPV CCCCCEEEEEECCCEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DWRWPWGEALAVLENTATDVCLINLETTITADGEFADRKPVCYRMHPDNVPALTALRPHV CCCCCHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCEEEEECCCCCCEEHHCCCHH CALANNHILDFGYQGLTDTVAALAGAGIQSVGAGADLLAARRSALVTVGHERRVIVGSVA HHHCCCCEEECCCCCHHHHHHHHHCCCHHHCCCCHHHHHHCCCEEEEECCCCEEEEEEEE AESSGVPESWAARRDRPGVWLIRDPAQRDVADDVAAQVLADKRPGDIAIVSMHWGSNWGY CCCCCCCHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCE ATAPGDVAFAHRLIDAGIDMVHGHSSHHPRPIEIYRGKPILYGCGDVVDDYEGIGGHESF ECCCCHHHHHHHHHHHCCCEECCCCCCCCCCEEEECCCEEEEECCCHHHHHCCCCCHHHH RSELRLLYLTVTDPASGNLISLQMLPLRVSRMRLQRASQTDTEWLRNTIERISRRFGIRV HCCEEEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCEEE VTRPDNLLEVVPAANLTSKE EECCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]