Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636363
Identifier: 121636363
GI number: 121636363
Start: 568044
End: 569363
Strand: Reverse
Name: 121636363
Synonym: BCG_0488c
Alternate gene names: NA
Gene position: 569363-568044 (Counterclockwise)
Preceding gene: 121636364
Following gene: 121636362
Centisome position: 13.02
GC content: 67.27
Gene sequence:
>1320_bases GTGCAGCAATCACTCCGACGATCGGTGGCTGTTGTCGGAAGTGGGGTCGCCGGCCTCACCGCCGCCTACATCCTGTCTGG ACGGGACCGAGTCACCCTGTACGAGGCGGACGGCCGGCTGGGCGGTCATGCCCACACCCACTATCTGGACAACGGTGGCG GCCCCCGGGGCACCGACGTCGTCGGCGTCGACTCGGCGTTCCTGGTGCACAACGACCGAACCTATCCAACGTTGTGCCGA TTGTTCGCCGAACTGGGTGTGGCCACCCAGGAGTCGGAAATGTCGATGTCGGTGCGCGCCGACGACATCGGACTCGAATA TGCCGGCGCACTGGGAGCGCGCGGGCTGTTCGCTTGCCGGCAATCGCTGCGGCCACGGTATCTGTGCATGCTTGCCGAGA TTCTCCGCTTCCACCGCGCCGCGGCTCGCCTGCTGCGTGAGGAGACCGACAACGCGGAAGACAAACCGGAGACGCTGGAA GCCTTCCTGAGCCGGCACCACTTCTCGCAGTATTTCGTCGATTACTTCATCACACCCTTGGTCGCCGCCGTGTGGTCCTG CGGCGGGGCCGACGCCTTGCGCTATCCGGCCCGGTATCTGTTCGTCTTCCTCGACCATCACGGCATGCTGTCGGTGTTCG GGTCGCCAACCTGGCGTACCGTCACCGGAGGTTCCGCCAACTACGTGCAGGCGATCGCAGCTCAGCTGGACGAGGTGTCG ACCCGCACGCCAGTGCACTCGCTGCGCCGGCTGCCGGACGGGGTATTGGTGGGCGCGGGTGATGGGCCGTCGCGGCGTTT CGATGCGGCCGTCGTCGCGGTCCATCCCGACCAGGCGCTGCTGTTGCTCGACGAGCCGACACCGGCCGAGCGCGCGGTCC TGGGCGCGATCGCATACTCCACCAACAGCGCCCAGCTGCACACCGACGAGTCGGTCCTGCCCCGCCACCATCGCGCCCGC GCATCCTGGAACTACCTGGTGACACCCGGGCAGCACCAGGTCGTGGTCAGCTACGACATCAGCAGGCTAATGCGCCTCGA CGGTGGCCGCCGGTATCTGGTCACCCTCGGCGGCCACGACCGGGTTGATCCCAGCTCGGTGATCGCCGAGATGACCTACA GCCATCCGCTGTACACACCGGAATCGGTTGCAGCCCAACGCTTATTGCCGACGCTGGGTGACAATCGGGTGGTATTCGCC GGCGCCTACCACGGCTGGGGATTCCACGAGGACGGCGCCGCCTCGGGTCTGCGGGCGGCCCGGCGCCTTGGCGCCGACTG GCCGGCAGCGATCCCACAGGAGGCGATGGTCGCGTGCTGA
Upstream 100 bases:
>100_bases ACCCAGCGAAACCCAGCCCGCGGGCCGGCCCTTGGCGATGAGCAGCGACCGCCTCGGCTGAACCGCCCGTCCGTCTAGCC GGCCGCTCCGAATACAGGAT
Downstream 100 bases:
>100_bases CTCAAACCCTGACGCCGGCGATCTACCGCACCACGATCAGCCACTGCAGACAAGTCCCGGTGCACCACTCGTTCGCATAC CGCAGCTACAGCTGGTACGT
Product: hypothetical protein
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing; Dehydrogenase; Amine Oxidoreductase; Flavin Containing Amine Oxidoreductase; Amino-Oxidase; Flavin-Containing Amine Oxidase; Oxidoreductase; Amine Oxidase Flavin-Containing Superfamily; Amine Oxidase Flavin-Containing Protein; Amine Oxidase Protein; FAD-Dependent Oxidoreductase; Amine OxidaseFAD Dependent Oxidoreductase; Amine-Oxidase; Fad Dependent Oxidoreductase; Flavin Containing Amine Oxidoreductase Protein; Flavin Containing Amine Oxidoreductas
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MQQSLRRSVAVVGSGVAGLTAAYILSGRDRVTLYEADGRLGGHAHTHYLDNGGGPRGTDVVGVDSAFLVHNDRTYPTLCR LFAELGVATQESEMSMSVRADDIGLEYAGALGARGLFACRQSLRPRYLCMLAEILRFHRAAARLLREETDNAEDKPETLE AFLSRHHFSQYFVDYFITPLVAAVWSCGGADALRYPARYLFVFLDHHGMLSVFGSPTWRTVTGGSANYVQAIAAQLDEVS TRTPVHSLRRLPDGVLVGAGDGPSRRFDAAVVAVHPDQALLLLDEPTPAERAVLGAIAYSTNSAQLHTDESVLPRHHRAR ASWNYLVTPGQHQVVVSYDISRLMRLDGGRRYLVTLGGHDRVDPSSVIAEMTYSHPLYTPESVAAQRLLPTLGDNRVVFA GAYHGWGFHEDGAASGLRAARRLGADWPAAIPQEAMVAC
Sequences:
>Translated_439_residues MQQSLRRSVAVVGSGVAGLTAAYILSGRDRVTLYEADGRLGGHAHTHYLDNGGGPRGTDVVGVDSAFLVHNDRTYPTLCR LFAELGVATQESEMSMSVRADDIGLEYAGALGARGLFACRQSLRPRYLCMLAEILRFHRAAARLLREETDNAEDKPETLE AFLSRHHFSQYFVDYFITPLVAAVWSCGGADALRYPARYLFVFLDHHGMLSVFGSPTWRTVTGGSANYVQAIAAQLDEVS TRTPVHSLRRLPDGVLVGAGDGPSRRFDAAVVAVHPDQALLLLDEPTPAERAVLGAIAYSTNSAQLHTDESVLPRHHRAR ASWNYLVTPGQHQVVVSYDISRLMRLDGGRRYLVTLGGHDRVDPSSVIAEMTYSHPLYTPESVAAQRLLPTLGDNRVVFA GAYHGWGFHEDGAASGLRAARRLGADWPAAIPQEAMVAC >Mature_439_residues MQQSLRRSVAVVGSGVAGLTAAYILSGRDRVTLYEADGRLGGHAHTHYLDNGGGPRGTDVVGVDSAFLVHNDRTYPTLCR LFAELGVATQESEMSMSVRADDIGLEYAGALGARGLFACRQSLRPRYLCMLAEILRFHRAAARLLREETDNAEDKPETLE AFLSRHHFSQYFVDYFITPLVAAVWSCGGADALRYPARYLFVFLDHHGMLSVFGSPTWRTVTGGSANYVQAIAAQLDEVS TRTPVHSLRRLPDGVLVGAGDGPSRRFDAAVVAVHPDQALLLLDEPTPAERAVLGAIAYSTNSAQLHTDESVLPRHHRAR ASWNYLVTPGQHQVVVSYDISRLMRLDGGRRYLVTLGGHDRVDPSSVIAEMTYSHPLYTPESVAAQRLLPTLGDNRVVFA GAYHGWGFHEDGAASGLRAARRLGADWPAAIPQEAMVAC
Specific function: Unknown
COG id: COG2907
COG function: function code R; Predicted NAD/FAD-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47818; Mature: 47818
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQSLRRSVAVVGSGVAGLTAAYILSGRDRVTLYEADGRLGGHAHTHYLDNGGGPRGTDV CCHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCEE VGVDSAFLVHNDRTYPTLCRLFAELGVATQESEMSMSVRADDIGLEYAGALGARGLFACR EECCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHCCHHHHHHH QSLRPRYLCMLAEILRFHRAAARLLREETDNAEDKPETLEAFLSRHHFSQYFVDYFITPL HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VAAVWSCGGADALRYPARYLFVFLDHHGMLSVFGSPTWRTVTGGSANYVQAIAAQLDEVS HHHHHCCCCCHHHHCCCEEEEEEEECCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHH TRTPVHSLRRLPDGVLVGAGDGPSRRFDAAVVAVHPDQALLLLDEPTPAERAVLGAIAYS CCCHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHEEC TNSAQLHTDESVLPRHHRARASWNYLVTPGQHQVVVSYDISRLMRLDGGRRYLVTLGGHD CCCCEEECCCCCCCCHHHHCCCCCEEECCCCCEEEEEECHHHHHHCCCCCEEEEEECCCC RVDPSSVIAEMTYSHPLYTPESVAAQRLLPTLGDNRVVFAGAYHGWGFHEDGAASGLRAA CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHH RRLGADWPAAIPQEAMVAC HHCCCCCCCCCCCHHHHCC >Mature Secondary Structure MQQSLRRSVAVVGSGVAGLTAAYILSGRDRVTLYEADGRLGGHAHTHYLDNGGGPRGTDV CCHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCEE VGVDSAFLVHNDRTYPTLCRLFAELGVATQESEMSMSVRADDIGLEYAGALGARGLFACR EECCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHCCHHHHHHH QSLRPRYLCMLAEILRFHRAAARLLREETDNAEDKPETLEAFLSRHHFSQYFVDYFITPL HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VAAVWSCGGADALRYPARYLFVFLDHHGMLSVFGSPTWRTVTGGSANYVQAIAAQLDEVS HHHHHCCCCCHHHHCCCEEEEEEEECCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHH TRTPVHSLRRLPDGVLVGAGDGPSRRFDAAVVAVHPDQALLLLDEPTPAERAVLGAIAYS CCCHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHEEC TNSAQLHTDESVLPRHHRARASWNYLVTPGQHQVVVSYDISRLMRLDGGRRYLVTLGGHD CCCCEEECCCCCCCCHHHHCCCCCEEECCCCCEEEEEECHHHHHHCCCCCEEEEEECCCC RVDPSSVIAEMTYSHPLYTPESVAAQRLLPTLGDNRVVFAGAYHGWGFHEDGAASGLRAA CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHH RRLGADWPAAIPQEAMVAC HHCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA